RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 TEX49A0A1B0GTD5 131 aa10.8□□□□□ -0.68
CACNB1-206ENST00000539338 CFAP126Q5VTH2 177 aa10.8□□□□□ -0.68
CACNB1-206ENST00000539338 GOLGB1Q14789 3259 aaKnown RBP10.79□□□□□ -0.68
CACNB1-206ENST00000539338 LINC00482Q8N8I6 264 aa10.79□□□□□ -0.68
CACNB1-206ENST00000539338 NRACQ8N912 160 aa10.79□□□□□ -0.68
CACNB1-206ENST00000539338 SPATA3Q8NHX4 192 aa10.79□□□□□ -0.68
CACNB1-206ENST00000539338 MIFP14174 115 aa10.79□□□□□ -0.68
CACNB1-206ENST00000539338 HIGD2BQ4VC39 106 aa10.79□□□□□ -0.68
CACNB1-206ENST00000539338 RNASE3P12724 160 aaKnown RBP10.78□□□□□ -0.68
CACNB1-206ENST00000539338 SPANXB1Q9NS25 103 aaPredicted RBP10.78□□□□□ -0.68
CACNB1-206ENST00000539338 FAM222AQ5U5X8 452 aa10.78□□□□□ -0.68
CACNB1-206ENST00000539338 Q6ZS46 218 aa10.78□□□□□ -0.68
CACNB1-206ENST00000539338 C2orf91Q6ZV80 131 aa10.78□□□□□ -0.68
CACNB1-206ENST00000539338 SPANXCQ9NY87 97 aa10.78□□□□□ -0.68
CACNB1-206ENST00000539338 ABCA2Q9BZC7 2435 aa10.78□□□□□ -0.68
CACNB1-206ENST00000539338 A8MZ25 164 aa10.77□□□□□ -0.68
CACNB1-206ENST00000539338 CDSNQ15517 529 aa10.77□□□□□ -0.68
CACNB1-206ENST00000539338 ZNF462Q96JM2 2506 aa10.77□□□□□ -0.68
CACNB1-206ENST00000539338 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.69
CACNB1-206ENST00000539338 MT-ATP8P03928 68 aa10.77□□□□□ -0.69
CACNB1-206ENST00000539338 LINC00310P59036 64 aa10.77□□□□□ -0.69
CACNB1-206ENST00000539338 TMEM256-PLSCR3K7ERE1 68 aa10.77□□□□□ -0.69
CACNB1-206ENST00000539338 REG3AQ06141 175 aa10.77□□□□□ -0.69
CACNB1-206ENST00000539338 PIK3CD-AS1Q5SR53 167 aa10.77□□□□□ -0.69
CACNB1-206ENST00000539338 PRM2P04554 102 aa10.76□□□□□ -0.69
CACNB1-206ENST00000539338 C7orf33Q8WU49 177 aa10.76□□□□□ -0.69
CACNB1-206ENST00000539338 TRBV27A0A0K0K1C4 114 aa10.75□□□□□ -0.69
CACNB1-206ENST00000539338 CENPFP49454 3210 aa10.75□□□□□ -0.69
CACNB1-206ENST00000539338 TLN1Q9Y490 2541 aaKnown RBP10.75□□□□□ -0.69
CACNB1-206ENST00000539338 TRIAP1O43715 76 aa10.75□□□□□ -0.69
CACNB1-206ENST00000539338 LINC00308Q8TCZ7 52 aa10.75□□□□□ -0.69
CACNB1-206ENST00000539338 LYRM9A8MSI8 78 aa10.75□□□□□ -0.69
CACNB1-206ENST00000539338 CHCHD10Q8WYQ3 142 aaPredicted RBP10.74□□□□□ -0.69
CACNB1-206ENST00000539338 C18orf65Q6ZTR6 163 aa10.74□□□□□ -0.69
CACNB1-206ENST00000539338 MYO9AB2RTY4 2548 aa10.74□□□□□ -0.69
CACNB1-206ENST00000539338 TMEM258P61165 79 aa10.74□□□□□ -0.69
CACNB1-206ENST00000539338 Q8N976 141 aa10.74□□□□□ -0.69
CACNB1-206ENST00000539338 TSHBP01222 138 aa10.73□□□□□ -0.69
CACNB1-206ENST00000539338 OXLD1Q5BKU9 147 aa10.73□□□□□ -0.69
CACNB1-206ENST00000539338 SLPIP03973 132 aa10.73□□□□□ -0.69
CACNB1-206ENST00000539338 COX7BP24311 80 aa10.73□□□□□ -0.69
CACNB1-206ENST00000539338 LINC00643Q86TS7 51 aa10.73□□□□□ -0.69
CACNB1-206ENST00000539338 ZNF702PQ9H963 129 aa10.72□□□□□ -0.69
CACNB1-206ENST00000539338 H3BQ85 93 aa10.72□□□□□ -0.69
CACNB1-206ENST00000539338 COL5A1P20908 1838 aaPredicted RBP10.72□□□□□ -0.69
CACNB1-206ENST00000539338 TRBV6-5A0A0K0K1A5 114 aa10.72□□□□□ -0.69
CACNB1-206ENST00000539338 KIR2DL5BQ8NHK3 375 aa10.71□□□□□ -0.69
CACNB1-206ENST00000539338 FASNP49327 2511 aaKnown RBP10.71□□□□□ -0.69
CACNB1-206ENST00000539338 PRRC2AP48634 2157 aaKnown RBP10.71□□□□□ -0.69
CACNB1-206ENST00000539338 UBE2AP49459 152 aa10.71□□□□□ -0.69
CACNB1-206ENST00000539338 KLLNB2CW77 178 aa10.71□□□□□ -0.69
CACNB1-206ENST00000539338 URB1-AS1Q96HZ7 61 aa10.71□□□□□ -0.7
CACNB1-206ENST00000539338 TRBV6-8A0A0A6YYG3 113 aa10.71□□□□□ -0.7
CACNB1-206ENST00000539338 UFSP1Q6NVU6 142 aa10.7□□□□□ -0.7
CACNB1-206ENST00000539338 C16orf95Q9H693 158 aa10.7□□□□□ -0.7
CACNB1-206ENST00000539338 FAM110AQ9BQ89 295 aa10.7□□□□□ -0.7
CACNB1-206ENST00000539338 WFDC10AQ9H1F0 79 aa10.7□□□□□ -0.7
CACNB1-206ENST00000539338 TRAV23DV6A0A075B6W5 121 aa10.69□□□□□ -0.7
CACNB1-206ENST00000539338 CRYGDP07320 174 aa10.69□□□□□ -0.7
CACNB1-206ENST00000539338 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
CACNB1-206ENST00000539338 EDN2P20800 178 aa10.69□□□□□ -0.7
CACNB1-206ENST00000539338 SDIM1Q6ZPB5 146 aa10.69□□□□□ -0.7
CACNB1-206ENST00000539338 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
CACNB1-206ENST00000539338 IGLV1-40P01703 118 aa10.68□□□□□ -0.7
CACNB1-206ENST00000539338 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
CACNB1-206ENST00000539338 LRRK2Q5S007 2527 aa10.68□□□□□ -0.7
CACNB1-206ENST00000539338 MRPS12O15235 138 aaKnown RBP10.68□□□□□ -0.7
CACNB1-206ENST00000539338 IGKV2-24A0A0C4DH68 120 aa10.68□□□□□ -0.7
CACNB1-206ENST00000539338 TRBV30A0A0K0K1B3 111 aa10.68□□□□□ -0.7
CACNB1-206ENST00000539338 H7C423 109 aa10.68□□□□□ -0.7
CACNB1-206ENST00000539338 RBX1P62877 108 aa10.68□□□□□ -0.7
CACNB1-206ENST00000539338 NDUFV3P56181 108 aaKnown RBP10.68□□□□□ -0.7
CACNB1-206ENST00000539338 TRBV6-4A0A1B0GX49 114 aa10.67□□□□□ -0.7
CACNB1-206ENST00000539338 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
CACNB1-206ENST00000539338 IBA57-AS1B1ANH7 110 aa10.67□□□□□ -0.7
CACNB1-206ENST00000539338 C9orf85Q96MD7 179 aa10.67□□□□□ -0.7
CACNB1-206ENST00000539338 XAGE1AQ9HD64 81 aa10.67□□□□□ -0.7
CACNB1-206ENST00000539338 NDUFB1O75438 58 aa10.66□□□□□ -0.7
CACNB1-206ENST00000539338 WFDC9Q8NEX5 89 aa10.66□□□□□ -0.7
CACNB1-206ENST00000539338 CNFNQ9BYD5 112 aa10.66□□□□□ -0.7
CACNB1-206ENST00000539338 MP68P56378 58 aa10.66□□□□□ -0.7
CACNB1-206ENST00000539338 AVPP01185 164 aa10.66□□□□□ -0.7
CACNB1-206ENST00000539338 C5orf47Q569G3 176 aa10.66□□□□□ -0.7
CACNB1-206ENST00000539338 J3KT08 172 aa10.65□□□□□ -0.7
CACNB1-206ENST00000539338 UPK3BQ9BT76 320 aa10.65□□□□□ -0.7
CACNB1-206ENST00000539338 UBE2D4Q9Y2X8 147 aa10.65□□□□□ -0.7
CACNB1-206ENST00000539338 PDE6GP18545 87 aa10.64□□□□□ -0.71
CACNB1-206ENST00000539338 CPAMD8Q8IZJ3 1885 aa10.64□□□□□ -0.71
CACNB1-206ENST00000539338 WWC2-AS2Q96NR7 200 aa10.64□□□□□ -0.71
CACNB1-206ENST00000539338 LINC00526Q96FQ7 95 aa10.63□□□□□ -0.71
CACNB1-206ENST00000539338 EML5Q05BV3 1969 aa10.63□□□□□ -0.71
CACNB1-206ENST00000539338 SCXQ7RTU7 201 aa10.63□□□□□ -0.71
CACNB1-206ENST00000539338 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
CACNB1-206ENST00000539338 M0R2N4 97 aa10.62□□□□□ -0.71
CACNB1-206ENST00000539338 C6orf99Q4VX62 202 aa10.62□□□□□ -0.71
CACNB1-206ENST00000539338 BPY2O14599 106 aa10.6□□□□□ -0.71
CACNB1-206ENST00000539338 IGIPA6NJ69 53 aa10.6□□□□□ -0.71
CACNB1-206ENST00000539338 UBE2D1P51668 147 aa10.6□□□□□ -0.71
CACNB1-206ENST00000539338 TIMM17BO60830 172 aa10.59□□□□□ -0.71
CACNB1-206ENST00000539338 ENHOQ6UWT2 76 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms