RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 Q6ZR54 194 aa5.02□□□□□ -1.61
LMO3-220ENST00000539232 LYPD1Q8N2G4 141 aa5.02□□□□□ -1.61
LMO3-220ENST00000539232 IFI27L1Q96BM0 104 aa5.02□□□□□ -1.61
LMO3-220ENST00000539232 VSIG2Q96IQ7 327 aa5.02□□□□□ -1.61
LMO3-220ENST00000539232 LINC00467Q9BRT7 94 aa5.02□□□□□ -1.61
LMO3-220ENST00000539232 CHAC1Q9BUX1 264 aa5.02□□□□□ -1.61
LMO3-220ENST00000539232 TRGV1A0A0A0MS02 117 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 RBAKDNA6NC62 111 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 RHODO00212 210 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 TCRAP04437 139 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 GCSHP23434 173 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 TWIST1Q15672 202 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 ANXA2RQ3ZCQ2 193 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 TMEM75Q8N9X5 138 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 KRTAP1-5Q9BYS1 174 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 MAP1LC3AQ9H492 121 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 LINC00588Q9Y4M8 146 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 PKD1P98161 4303 aa5.01□□□□□ -1.61
LMO3-220ENST00000539232 IGHV3-16A0A0C4DH30 117 aa5□□□□□ -1.61
LMO3-220ENST00000539232 P0DMU3 169 aa5□□□□□ -1.61
LMO3-220ENST00000539232 FAM231AP0DMU4 169 aa5□□□□□ -1.61
LMO3-220ENST00000539232 FAM231CP0DMU5 169 aa5□□□□□ -1.61
LMO3-220ENST00000539232 FXYD2P54710 66 aa5□□□□□ -1.61
LMO3-220ENST00000539232 RPL32P62910 135 aaKnown RBP5□□□□□ -1.61
LMO3-220ENST00000539232 CACNG7P62955 275 aa5□□□□□ -1.61
LMO3-220ENST00000539232 ESRGQ1W209 222 aa5□□□□□ -1.61
LMO3-220ENST00000539232 CFAP126Q5VTH2 177 aa5□□□□□ -1.61
LMO3-220ENST00000539232 TEN1Q86WV5 123 aa5□□□□□ -1.61
LMO3-220ENST00000539232 ORMDL3Q8N138 153 aa5□□□□□ -1.61
LMO3-220ENST00000539232 SYT8Q8NBV8 401 aa5□□□□□ -1.61
LMO3-220ENST00000539232 ZNRF2Q8NHG8 242 aa5□□□□□ -1.61
LMO3-220ENST00000539232 PGLYRP4Q96LB8 373 aa5□□□□□ -1.61
LMO3-220ENST00000539232 LINC01600Q96MT4 127 aa5□□□□□ -1.61
LMO3-220ENST00000539232 TRBV25-1A0A075B6N4 114 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 IGKCP01834 107 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 INAFM2P0DMQ5 153 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 NMUP48645 174 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 CRIP1P50238 77 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 HERV-K104P63124 156 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 FHL2Q14192 279 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 PRNTQ86SH4 94 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 UBE2DNLQ8IWF7 75 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 C18orf15Q96N68 181 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 NXT2Q9NPJ8 142 aaKnown RBP4.99□□□□□ -1.61
LMO3-220ENST00000539232 NHP2Q9NX24 153 aaKnown RBP4.99□□□□□ -1.61
LMO3-220ENST00000539232 TP73-AS1Q9UF72 201 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 SS18L2Q9UHA2 77 aa4.99□□□□□ -1.61
LMO3-220ENST00000539232 FLG2Q5D862 2391 aaPredicted RBP4.99□□□□□ -1.61
LMO3-220ENST00000539232 TRGV2A0A075B6R0 118 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 A0A096LNJ9 63 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 A0A096LPF7 62 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 LOC100131303A0A0U1RQF7 123 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 FABP5P3A8MUU1 101 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 SNAI2O43623 268 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 DPM2O94777 84 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 NCR2O95944 276 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 PLNP26678 52 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 FCER1GP30273 86 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 GAGE2BQ13066 116 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 GAGE2EQ4V326 116 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 FAM104BQ5XKR9 115 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 SH2D6Q7Z4S9 175 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 PRELID3AQ96N28 172 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 C20orf78Q9BR46 151 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 GAGE2DQ9UEU5 116 aa4.98□□□□□ -1.61
LMO3-220ENST00000539232 IGKV3D-20A0A0C4DH25 116 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 B5MCH6 92 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 SNCGO76070 127 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 MT-ATP8P03928 68 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 IFITM1P13164 125 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 XGP55808 180 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 NDUFV3P56181 108 aaKnown RBP4.97□□□□□ -1.61
LMO3-220ENST00000539232 TTC32Q5I0X7 151 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 Q6ZSN1 163 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 COX8CQ7Z4L0 72 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 Q86TA4 180 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 PCP2Q8IVA1 136 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 C15orf53Q8NAA6 179 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 ZC2HC1AQ96GY0 325 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 NAA38Q9BRA0 125 aaKnown RBP4.97□□□□□ -1.61
LMO3-220ENST00000539232 Q9UF83 564 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 HHLA3Q9XRX5 114 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 LENEPQ9Y5L5 61 aa4.97□□□□□ -1.61
LMO3-220ENST00000539232 TRBV7-3A0A075B6L6 115 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 NBDYA0A0U1RRE5 68 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 LINC01549A6NIU2 74 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 A8MWV9 139 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 RNASE3P12724 160 aaKnown RBP4.96□□□□□ -1.62
LMO3-220ENST00000539232 IFI27P40305 119 aaPredicted RBP4.96□□□□□ -1.62
LMO3-220ENST00000539232 UBE2D3P61077 147 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 UBE2D2P62837 147 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 TNP2Q05952 138 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 ZNF415Q09FC8 603 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 ODF1Q14990 250 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 C5orf47Q569G3 176 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 FAM159AQ6UWV7 190 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 RASL10AQ92737 203 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 HIST1H4GQ99525 98 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 JPT2Q9H910 190 aa4.96□□□□□ -1.62
LMO3-220ENST00000539232 APOBP04114 4563 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms