RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 TMEM243Q9BU79 118 aa14.39□□□□□ -0.11
DDX55-205ENST00000538744 CSDC2Q9Y534 153 aaKnown RBP14.39□□□□□ -0.11
DDX55-205ENST00000538744 TINCRA0A1B0GVN0 87 aa14.38□□□□□ -0.11
DDX55-205ENST00000538744 A6NDN8 102 aa14.38□□□□□ -0.11
DDX55-205ENST00000538744 KRTAP10-11P60412 298 aa14.38□□□□□ -0.11
DDX55-205ENST00000538744 Q8NAQ8 132 aa14.38□□□□□ -0.11
DDX55-205ENST00000538744 UBE2L6O14933 153 aa14.37□□□□□ -0.11
DDX55-205ENST00000538744 EGFEM1PQ0D2K5 195 aa14.37□□□□□ -0.11
DDX55-205ENST00000538744 TAL2Q16559 108 aa14.37□□□□□ -0.11
DDX55-205ENST00000538744 COX11Q9Y6N1 276 aa14.37□□□□□ -0.11
DDX55-205ENST00000538744 LEPROTO15243 131 aa14.36□□□□□ -0.11
DDX55-205ENST00000538744 DEFB4AO15263 64 aa14.36□□□□□ -0.11
DDX55-205ENST00000538744 H7C423 109 aa14.35□□□□□ -0.11
DDX55-205ENST00000538744 J3QQQ9 107 aa14.35□□□□□ -0.11
DDX55-205ENST00000538744 TAX1BP3O14907 124 aa14.35□□□□□ -0.11
DDX55-205ENST00000538744 GCSHP23434 173 aa14.35□□□□□ -0.11
DDX55-205ENST00000538744 UBE2D1P51668 147 aa14.35□□□□□ -0.11
DDX55-205ENST00000538744 PRO0255Q9UI72 69 aa14.35□□□□□ -0.11
DDX55-205ENST00000538744 LGALS3P17931 250 aaKnown RBP14.35□□□□□ -0.11
DDX55-205ENST00000538744 TSPEAR-AS2P59090 65 aa14.35□□□□□ -0.11
DDX55-205ENST00000538744 AMMECR1LQ6DCA0 310 aa14.35□□□□□ -0.11
DDX55-205ENST00000538744 DAD1P61803 113 aa14.34□□□□□ -0.11
DDX55-205ENST00000538744 SCGB1D4Q6XE38 83 aa14.34□□□□□ -0.11
DDX55-205ENST00000538744 Q6ZVH6 145 aa14.34□□□□□ -0.11
DDX55-205ENST00000538744 CEND1Q8N111 149 aa14.34□□□□□ -0.11
DDX55-205ENST00000538744 OR5A1Q8NGJ0 315 aa14.34□□□□□ -0.11
DDX55-205ENST00000538744 PLEKHB2Q96CS7 222 aa14.34□□□□□ -0.11
DDX55-205ENST00000538744 GYPEP15421 78 aa14.33□□□□□ -0.12
DDX55-205ENST00000538744 TMEM101Q96IK0 257 aa14.33□□□□□ -0.12
DDX55-205ENST00000538744 HIST1H4GQ99525 98 aa14.33□□□□□ -0.12
DDX55-205ENST00000538744 TM2D2Q9BX73 214 aa14.33□□□□□ -0.12
DDX55-205ENST00000538744 GEMIN7Q9H840 131 aaKnown RBP14.33□□□□□ -0.12
DDX55-205ENST00000538744 TRBV6-8A0A0A6YYG3 113 aa14.32□□□□□ -0.12
DDX55-205ENST00000538744 A8MZ25 164 aa14.32□□□□□ -0.12
DDX55-205ENST00000538744 FBN1P35555 2871 aaKnown RBP14.32□□□□□ -0.12
DDX55-205ENST00000538744 FXYD2P54710 66 aa14.31□□□□□ -0.12
DDX55-205ENST00000538744 TIRAPP58753 221 aa14.31□□□□□ -0.12
DDX55-205ENST00000538744 LINC00469Q8N7U9 141 aa14.31□□□□□ -0.12
DDX55-205ENST00000538744 ATP6V0E2Q8NHE4 81 aa14.31□□□□□ -0.12
DDX55-205ENST00000538744 CDC42SE2Q9NRR3 84 aa14.31□□□□□ -0.12
DDX55-205ENST00000538744 TRRAPQ9Y4A5 3859 aa14.3□□□□□ -0.12
DDX55-205ENST00000538744 IGHV3-64A0A075B6Q5 118 aa14.3□□□□□ -0.12
DDX55-205ENST00000538744 SPART-AS1P0CW21 52 aa14.3□□□□□ -0.12
DDX55-205ENST00000538744 CELA1Q9UNI1 258 aa14.3□□□□□ -0.12
DDX55-205ENST00000538744 PAX4O43316 350 aa14.29□□□□□ -0.12
DDX55-205ENST00000538744 PTTG1IPP53801 180 aa14.29□□□□□ -0.12
DDX55-205ENST00000538744 H3BRM9 83 aa14.29□□□□□ -0.12
DDX55-205ENST00000538744 FAM19A3Q7Z5A8 133 aa14.29□□□□□ -0.12
DDX55-205ENST00000538744 IGLV5-45A0A087WSX0 123 aa14.28□□□□□ -0.12
DDX55-205ENST00000538744 ATP5G1P05496 136 aa14.28□□□□□ -0.12
DDX55-205ENST00000538744 IGHV3-30-3P0DP02 117 aa14.28□□□□□ -0.12
DDX55-205ENST00000538744 GAGE6Q13070 117 aa14.28□□□□□ -0.12
DDX55-205ENST00000538744 NBEAL2Q6ZNJ1 2754 aa14.28□□□□□ -0.12
DDX55-205ENST00000538744 IGHV1-58A0A0C4DH39 117 aa14.27□□□□□ -0.12
DDX55-205ENST00000538744 A0A0J9YY99 117 aa14.27□□□□□ -0.12
DDX55-205ENST00000538744 HERVK_113P63121 156 aa14.27□□□□□ -0.12
DDX55-205ENST00000538744 CHCHD5Q9BSY4 110 aa14.27□□□□□ -0.12
DDX55-205ENST00000538744 K7EP13 123 aa14.27□□□□□ -0.13
DDX55-205ENST00000538744 LINC00242Q5T6M2 205 aa14.27□□□□□ -0.13
DDX55-205ENST00000538744 STAB1Q9NY15 2570 aa14.26□□□□□ -0.13
DDX55-205ENST00000538744 TEX48A0A1B0GUV7 120 aa14.26□□□□□ -0.13
DDX55-205ENST00000538744 SMIM13P0DJ93 91 aa14.26□□□□□ -0.13
DDX55-205ENST00000538744 VSIG2Q96IQ7 327 aa14.26□□□□□ -0.13
DDX55-205ENST00000538744 CDKN2A-AS1Q9UH64 79 aa14.26□□□□□ -0.13
DDX55-205ENST00000538744 TRAV8-3A0A0A6YYJ7 113 aa14.25□□□□□ -0.13
DDX55-205ENST00000538744 SPINK8P0C7L1 97 aa14.25□□□□□ -0.13
DDX55-205ENST00000538744 TRAV13-1A0A0B4J241 112 aa14.24□□□□□ -0.13
DDX55-205ENST00000538744 SRSF9Q13242 221 aaKnown RBP eCLIP14.24□□□□□ -0.131e-6■■■■□ 21.5
DDX55-205ENST00000538744 SPANXB1Q9NS25 103 aaPredicted RBP14.24□□□□□ -0.13
DDX55-205ENST00000538744 G3V4G9 280 aa14.24□□□□□ -0.13
DDX55-205ENST00000538744 COX6A2Q02221 97 aa14.24□□□□□ -0.13
DDX55-205ENST00000538744 NHP2Q9NX24 153 aaKnown RBP14.24□□□□□ -0.13
DDX55-205ENST00000538744 C9orf118A6NHY6 69 aa14.22□□□□□ -0.13
DDX55-205ENST00000538744 F5H768 121 aa14.21□□□□□ -0.13
DDX55-205ENST00000538744 VAMP3Q15836 100 aa14.21□□□□□ -0.13
DDX55-205ENST00000538744 RAB37Q96AX2 223 aa14.21□□□□□ -0.13
DDX55-205ENST00000538744 RETNQ9HD89 108 aa14.21□□□□□ -0.14
DDX55-205ENST00000538744 MAST4O15021 2626 aa14.2□□□□□ -0.14
DDX55-205ENST00000538744 IGLV4-60A0A075B6I1 120 aa14.2□□□□□ -0.14
DDX55-205ENST00000538744 TRAV26-1A0A087WT03 109 aa14.2□□□□□ -0.14
DDX55-205ENST00000538744 A0A096LPF7 62 aa14.2□□□□□ -0.14
DDX55-205ENST00000538744 TMEM238LA0A1B0GVL6 79 aa14.19□□□□□ -0.14
DDX55-205ENST00000538744 A6NJY4 79 aa14.19□□□□□ -0.14
DDX55-205ENST00000538744 SAMD5Q5TGI4 173 aa14.19□□□□□ -0.14
DDX55-205ENST00000538744 C10orf126Q8N4M7 172 aa14.19□□□□□ -0.14
DDX55-205ENST00000538744 NDUFA12Q9UI09 145 aa14.19□□□□□ -0.14
DDX55-205ENST00000538744 K7ERJ3 54 aa14.18□□□□□ -0.14
DDX55-205ENST00000538744 HTN3P15516 51 aa14.18□□□□□ -0.14
DDX55-205ENST00000538744 A0A0J9YXY3 114 aa14.18□□□□□ -0.14
DDX55-205ENST00000538744 C12orf74Q32Q52 190 aa14.18□□□□□ -0.14
DDX55-205ENST00000538744 ZFAND6Q6FIF0 208 aa14.18□□□□□ -0.14
DDX55-205ENST00000538744 IGLV5-39A0A0G2JS06 123 aa14.17□□□□□ -0.14
DDX55-205ENST00000538744 TMEM238C9JI98 176 aa14.17□□□□□ -0.14
DDX55-205ENST00000538744 H3BUT2 72 aa14.17□□□□□ -0.14
DDX55-205ENST00000538744 UBE2V1Q13404 147 aa14.17□□□□□ -0.14
DDX55-205ENST00000538744 A0A1B0GUV1 79 aa14.16□□□□□ -0.14
DDX55-205ENST00000538744 A0A1B0GWB2 263 aa14.16□□□□□ -0.14
DDX55-205ENST00000538744 IGHV3-30P01768 117 aa14.16□□□□□ -0.14
DDX55-205ENST00000538744 IGHV3-30-5P0DP03 117 aa14.16□□□□□ -0.14
DDX55-205ENST00000538744 MRPL23Q16540 153 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms