RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 DKK2Q9UBU2 259 aa2.59□□□□□ -2
PTPN22-211ENST00000538253 SORL1Q92673 2214 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 TRAV26-2A0A0B4J265 109 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 PAX4O43316 350 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 SPINK4O60575 86 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 NCR2O95944 276 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 CRYGAP11844 174 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 TMEM258P61165 79 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 MRPL55Q7Z7F7 128 aaKnown RBP2.58□□□□□ -2
PTPN22-211ENST00000538253 A0A0J9YWU9 116 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 USP17L23D6RBM5 183 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 H3BTX0 84 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 TRACP01848 142 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 GATA1P15976 413 aaPredicted RBP2.58□□□□□ -2
PTPN22-211ENST00000538253 ZNF726P1Q15940 193 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 PAPPA-AS1Q5QFB9 102 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 FAM222AQ5U5X8 452 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 CD164L2Q6UWJ8 174 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 C1orf158Q8N1D5 194 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 Q8NAQ8 132 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 TMEM70Q9BUB7 260 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 DPH3P1Q9H4G8 78 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 SPEGQ15772 3267 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 COL6A5A8TX70 2615 aa2.58□□□□□ -2
PTPN22-211ENST00000538253 A0A1B0GUT8 65 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 SCO2A0A1W2PP80 73 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 IGLL5B9A064 214 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 K7ERJ3 54 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 CRXO43186 299 aaPredicted RBP2.57□□□□□ -2
PTPN22-211ENST00000538253 HTN1P15515 57 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 ERCC8Q13216 396 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 ZNF876PQ49A33 203 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 LGALS9CQ6DKI2 356 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 TEN1Q86WV5 123 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 LINC00612Q8N6U2 182 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 CSNK1G2-AS1Q8NCQ2 148 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 C17orf77Q96MU5 243 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 X6R8D5 127 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 IGHV3-16A0A0C4DH30 117 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 F6UB75 175 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 K7EMI3 77 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 M0R381 172 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 MORN5Q5VZ52 161 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 CYSTM1Q9H1C7 97 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 NOP10Q9NPE3 64 aaKnown RBP2.57□□□□□ -2
PTPN22-211ENST00000538253 TRAV8-1A0A0A6YYK1 113 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 FAM240AA0A1B0GVK7 77 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 PRAC2D3DTV9 90 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 F5H697 171 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 H7C423 109 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 DEFB130BP0DP73 79 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 DEFB130AP0DP74 79 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 DAZ4Q86SG3 579 aaKnown RBP2.57□□□□□ -2
PTPN22-211ENST00000538253 CEND1Q8N111 149 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 DAZ3Q9NR90 486 aaKnown RBP2.57□□□□□ -2
PTPN22-211ENST00000538253 BOD1L1Q8NFC6 3051 aa2.57□□□□□ -2
PTPN22-211ENST00000538253 IGHV4-4A0A075B6R2 117 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 hADV29S1A0JD25 119 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 TCL1BO95988 128 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 ARMS2P0C7Q2 107 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 FXYD7P58549 80 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 C14orf177Q52M58 125 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 APCSP02743 223 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 HTN3P15516 51 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 COX7CP15954 63 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 ZNF56Q15929 161 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 POM121L12Q8N7R1 296 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 Q8TAT8 98 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 HIGD1BQ9P298 99 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 WNK1Q9H4A3 2382 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 STAB1Q9NY15 2570 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 TRAV12-2A0A075B6T6 113 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 K7EQD1 137 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 NXPH4O95158 308 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 HLA-DQA1P01909 254 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 PRB2P02812 416 aaPredicted RBP2.56□□□□□ -2
PTPN22-211ENST00000538253 FXYD2P54710 66 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 C12orf74Q32Q52 190 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 IGFL4Q6B9Z1 124 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 WFDC10AQ9H1F0 79 aa2.56□□□□□ -2
PTPN22-211ENST00000538253 CELSR2Q9HCU4 2923 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 UBE2L6O14933 153 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 GDF5OSQ5U4N7 250 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 NEXN-AS1Q8NBZ9 246 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 RBM12B-AS1Q9P1G2 102 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 NBEAL1Q6ZS30 2694 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 C19orf71A6NCJ1 209 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 H3BVH4 76 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 IGHV3-53P01767 116 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 HBBP68871 147 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 TWIST1Q15672 202 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 LOC400499M0QZD8 3231 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 VCYO14598 125 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 IGLV2-11P01706 119 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 LELP1Q5T871 98 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 AMN1Q8IY45 258 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 CNFNQ9BYD5 112 aa2.55□□□□□ -2
PTPN22-211ENST00000538253 NHP2Q9NX24 153 aaKnown RBP2.55□□□□□ -2
PTPN22-211ENST00000538253 BSNQ9UPA5 3926 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms