RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 C19orf54Q5BKX5 351 aa8.6□□□□□ -1.03
CHRNB1-202ENST00000536404 PRR9Q5T870 116 aa8.6□□□□□ -1.03
CHRNB1-202ENST00000536404 GAGE2AQ6NT46 116 aa8.6□□□□□ -1.03
CHRNB1-202ENST00000536404 CHCHD5Q9BSY4 110 aa8.6□□□□□ -1.03
CHRNB1-202ENST00000536404 CRYGAP11844 174 aa8.59□□□□□ -1.03
CHRNB1-202ENST00000536404 DEFB121Q5J5C9 76 aa8.59□□□□□ -1.03
CHRNB1-202ENST00000536404 RPL39LQ96EH5 51 aaKnown RBP8.59□□□□□ -1.03
CHRNB1-202ENST00000536404 C20orf173Q96LM9 149 aa8.59□□□□□ -1.03
CHRNB1-202ENST00000536404 DUX3Q96PT4 197 aa8.59□□□□□ -1.03
CHRNB1-202ENST00000536404 A0A0J9YY99 117 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 TRBV6-5A0A0K0K1A5 114 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 PF4P02776 101 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 CXCL5P42830 114 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 RHOHQ15669 191 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 LINC01620Q4KN68 170 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 KHDC1LQ5JSQ8 128 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 GPHB5Q86YW7 130 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 IGIPA6NJ69 53 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 IGF1P05019 195 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 CRYGDP07320 174 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 COX7CP15954 63 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 POLR2KP53803 58 aaKnown RBP8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 SLC25A29Q8N8R3 303 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 LINC00527Q9UJ94 153 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 TP53TG1Q9Y2A0 90 aa8.58□□□□□ -1.04
CHRNB1-202ENST00000536404 COL7A1Q02388 2944 aa8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 A0A0B4J2C4 111 aa8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 LOC107984640A0A0U1RRK4 108 aa8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 FAM236AA0A1B0GUQ0 79 aa8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 FAM236BA0A1B0GV22 79 aa8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 LINC01548A6NM66 108 aa8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 K7EIL1 84 aa8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 RNASE3P12724 160 aaKnown RBP8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 KRTAP10-11P60412 298 aa8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 C18orf65Q6ZTR6 163 aa8.57□□□□□ -1.04
CHRNB1-202ENST00000536404 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
CHRNB1-202ENST00000536404 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
CHRNB1-202ENST00000536404 K7EMT4 169 aa8.56□□□□□ -1.04
CHRNB1-202ENST00000536404 ZNF56Q15929 161 aa8.56□□□□□ -1.04
CHRNB1-202ENST00000536404 ZNF256Q9Y2P7 627 aaPredicted RBP8.56□□□□□ -1.04
CHRNB1-202ENST00000536404 KIF25-AS1Q9Y6Z4 181 aa8.56□□□□□ -1.04
CHRNB1-202ENST00000536404 KLLNB2CW77 178 aa8.55□□□□□ -1.04
CHRNB1-202ENST00000536404 RPL11P62913 178 aaKnown RBP8.55□□□□□ -1.04
CHRNB1-202ENST00000536404 ZNF876PQ49A33 203 aa8.55□□□□□ -1.04
CHRNB1-202ENST00000536404 LINC00482Q8N8I6 264 aa8.55□□□□□ -1.04
CHRNB1-202ENST00000536404 PLEKHB2Q96CS7 222 aa8.55□□□□□ -1.04
CHRNB1-202ENST00000536404 EDA2RQ9HAV5 297 aa8.55□□□□□ -1.04
CHRNB1-202ENST00000536404 J3QQQ9 107 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 ATOX1O00244 68 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 LEPROTO15243 131 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 TRACP01848 142 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 CFC1P0CG37 223 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 HOXD3P31249 432 aaPredicted RBP8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 SUMO4Q6EEV6 95 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 A0A0J9YX75 114 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 F5H697 171 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 GNRH2O43555 120 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 IGHG2P01859 326 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 LINC00315P59091 139 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 TRPT1Q86TN4 253 aaKnown RBP8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 LINC00643Q86TS7 51 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 RHPN1-AS1Q9BWJ2 59 aa8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 DAZ1Q9NQZ3 744 aaKnown RBP8.54□□□□□ -1.04
CHRNB1-202ENST00000536404 KMT2CQ8NEZ4 4911 aaKnown RBP8.53□□□□□ -1.04
CHRNB1-202ENST00000536404 TRGV11A0A075B6L2 103 aa8.53□□□□□ -1.04
CHRNB1-202ENST00000536404 SDHAF1A6NFY7 115 aa8.53□□□□□ -1.04
CHRNB1-202ENST00000536404 C2orf82Q6UX34 121 aa8.53□□□□□ -1.04
CHRNB1-202ENST00000536404 NBEAL2Q6ZNJ1 2754 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 TRBV30A0A0K0K1B3 111 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 TSHBP01222 138 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 MALP21145 153 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 EGFEM1PQ0D2K5 195 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 SFTA2Q6UW10 78 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 UNQ9165/PRO28630Q6UXU0 137 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 KLHL30-AS1Q8NEE0 82 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 ZNF580Q9UK33 172 aa8.52□□□□□ -1.05
CHRNB1-202ENST00000536404 IGHV3-33P01772 117 aa8.51□□□□□ -1.05
CHRNB1-202ENST00000536404 COX6CP09669 75 aa8.51□□□□□ -1.05
CHRNB1-202ENST00000536404 TEX49A0A1B0GTD5 131 aa8.51□□□□□ -1.05
CHRNB1-202ENST00000536404 C9orf85Q96MD7 179 aa8.51□□□□□ -1.05
CHRNB1-202ENST00000536404 RYR3Q15413 4870 aa8.5□□□□□ -1.05
CHRNB1-202ENST00000536404 TMEM223A0PJW6 202 aa8.5□□□□□ -1.05
CHRNB1-202ENST00000536404 I3L3M4 83 aa8.49□□□□□ -1.05
CHRNB1-202ENST00000536404 CCL24O00175 119 aa8.49□□□□□ -1.05
CHRNB1-202ENST00000536404 SNRPD3P62318 126 aaKnown RBP8.49□□□□□ -1.05
CHRNB1-202ENST00000536404 DEFB136Q30KP8 78 aa8.49□□□□□ -1.05
CHRNB1-202ENST00000536404 DPH3Q96FX2 82 aa8.49□□□□□ -1.05
CHRNB1-202ENST00000536404 TENM3Q9P273 2699 aa8.48□□□□□ -1.05
CHRNB1-202ENST00000536404 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
CHRNB1-202ENST00000536404 Q1RN00 199 aa8.48□□□□□ -1.05
CHRNB1-202ENST00000536404 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
CHRNB1-202ENST00000536404 AGRNO00468 2067 aa8.48□□□□□ -1.05
CHRNB1-202ENST00000536404 NDUFC2-KCTD14E9PQ53 114 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms