RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 LGALS9CQ6DKI2 356 aa7.82□□□□□ -1.16
CDCA3-206ENST00000536241 TIMM17AQ99595 171 aa7.82□□□□□ -1.16
CDCA3-206ENST00000536241 CDC42SE2Q9NRR3 84 aa7.82□□□□□ -1.16
CDCA3-206ENST00000536241 IGLV4-3A0A075B6K6 122 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 IFITM10A6NMD0 228 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 ATP5LO75964 103 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 ANGP03950 147 aaKnown RBP7.81□□□□□ -1.16
CDCA3-206ENST00000536241 PKIAP61925 76 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 LINC01556Q5JQF7 62 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 ZNF664Q8N3J9 261 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 IFI27L1Q96BM0 104 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 TMEM141Q96I45 108 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 KLK12Q9UKR0 248 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 LY6G6CO95867 125 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 MRPS36P82909 103 aaKnown RBP7.81□□□□□ -1.16
CDCA3-206ENST00000536241 Q6ZUT4 128 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 PACRGQ96M98 296 aaPredicted RBP7.81□□□□□ -1.16
CDCA3-206ENST00000536241 HIST1H2BLQ99880 126 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 VCX2Q9H322 139 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 HSPB8Q9UJY1 196 aa7.81□□□□□ -1.16
CDCA3-206ENST00000536241 TENM2Q9NT68 2774 aa7.8□□□□□ -1.16
CDCA3-206ENST00000536241 IGKV3OR2-268A0A0C4DH90 116 aa7.8□□□□□ -1.16
CDCA3-206ENST00000536241 PRSS1P07477 247 aa7.8□□□□□ -1.16
CDCA3-206ENST00000536241 Q6ZN92 141 aa7.8□□□□□ -1.16
CDCA3-206ENST00000536241 LINC00269Q8N2A0 174 aa7.8□□□□□ -1.16
CDCA3-206ENST00000536241 BAALCQ8WXS3 180 aa7.8□□□□□ -1.16
CDCA3-206ENST00000536241 STARD9Q9P2P6 4700 aa7.8□□□□□ -1.16
CDCA3-206ENST00000536241 DYNC2H1Q8NCM8 4307 aaKnown RBP7.8□□□□□ -1.16
CDCA3-206ENST00000536241 NPSP0C0P6 89 aa7.79□□□□□ -1.16
CDCA3-206ENST00000536241 CLPSL2Q6UWE3 100 aa7.79□□□□□ -1.16
CDCA3-206ENST00000536241 AMELXQ99217 191 aa7.79□□□□□ -1.16
CDCA3-206ENST00000536241 PRSS29PA6NIE9 313 aa7.78□□□□□ -1.16
CDCA3-206ENST00000536241 H0Y8G0 127 aa7.78□□□□□ -1.16
CDCA3-206ENST00000536241 PAPPA-AS1Q5QFB9 102 aa7.78□□□□□ -1.16
CDCA3-206ENST00000536241 ENHOQ6UWT2 76 aa7.78□□□□□ -1.16
CDCA3-206ENST00000536241 TEX43Q6ZNM6 134 aa7.78□□□□□ -1.16
CDCA3-206ENST00000536241 LINC00476Q8WZB0 136 aa7.78□□□□□ -1.16
CDCA3-206ENST00000536241 MAP1LC3CQ9BXW4 147 aa7.78□□□□□ -1.16
CDCA3-206ENST00000536241 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
CDCA3-206ENST00000536241 TRAV9-2A0A087WT02 112 aa7.77□□□□□ -1.17
CDCA3-206ENST00000536241 REG3AQ06141 175 aa7.77□□□□□ -1.17
CDCA3-206ENST00000536241 PMVKQ15126 192 aa7.77□□□□□ -1.17
CDCA3-206ENST00000536241 UBE2WQ96B02 151 aa7.77□□□□□ -1.17
CDCA3-206ENST00000536241 TRAV13-1A0A0B4J241 112 aa7.76□□□□□ -1.17
CDCA3-206ENST00000536241 IBA57-AS1B1ANH7 110 aa7.76□□□□□ -1.17
CDCA3-206ENST00000536241 M0R2N4 97 aa7.76□□□□□ -1.17
CDCA3-206ENST00000536241 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
CDCA3-206ENST00000536241 KRTDAPP60985 99 aa7.76□□□□□ -1.17
CDCA3-206ENST00000536241 OR10D4PQ8NGN7 298 aa7.76□□□□□ -1.17
CDCA3-206ENST00000536241 PRR34Q9NV39 138 aa7.76□□□□□ -1.17
CDCA3-206ENST00000536241 PLECQ15149 4684 aaKnown RBP7.76□□□□□ -1.17
CDCA3-206ENST00000536241 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 SYS1-DBNDD2H3BUS1 97 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 C10orf126Q8N4M7 172 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 IGLV10-54A0A075B6I4 117 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 K7EP13 123 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 CRPP02741 224 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 SPATA12Q7Z6I5 190 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 C2orf88Q9BSF0 95 aa7.75□□□□□ -1.17
CDCA3-206ENST00000536241 TRAV12-1A0A0B4J245 112 aa7.74□□□□□ -1.17
CDCA3-206ENST00000536241 A0A0J9YXV3 536 aa7.74□□□□□ -1.17
CDCA3-206ENST00000536241 UBE2D1P51668 147 aa7.74□□□□□ -1.17
CDCA3-206ENST00000536241 SS18Q15532 418 aa7.74□□□□□ -1.17
CDCA3-206ENST00000536241 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
CDCA3-206ENST00000536241 Q9HAA7 133 aa7.74□□□□□ -1.17
CDCA3-206ENST00000536241 CHTOPQ9Y3Y2 248 aaKnown RBP7.74□□□□□ -1.17
CDCA3-206ENST00000536241 TRAV8-3A0A0A6YYJ7 113 aa7.73□□□□□ -1.17
CDCA3-206ENST00000536241 COX6A2Q02221 97 aa7.73□□□□□ -1.17
CDCA3-206ENST00000536241 ODF1Q14990 250 aa7.73□□□□□ -1.17
CDCA3-206ENST00000536241 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
CDCA3-206ENST00000536241 PET117Q6UWS5 81 aa7.73□□□□□ -1.17
CDCA3-206ENST00000536241 TRAV8-4A0A0B4J246 113 aa7.72□□□□□ -1.17
CDCA3-206ENST00000536241 CCL25O15444 150 aa7.72□□□□□ -1.17
CDCA3-206ENST00000536241 MIAQ16674 131 aa7.72□□□□□ -1.17
CDCA3-206ENST00000536241 TTC32Q5I0X7 151 aa7.72□□□□□ -1.17
CDCA3-206ENST00000536241 MRPL35Q9NZE8 188 aaKnown RBP7.72□□□□□ -1.17
CDCA3-206ENST00000536241 IGLV4-69A0A075B6H9 119 aa7.71□□□□□ -1.18
CDCA3-206ENST00000536241 F8VRH5 84 aa7.71□□□□□ -1.18
CDCA3-206ENST00000536241 XCL1P47992 114 aa7.71□□□□□ -1.18
CDCA3-206ENST00000536241 LINC01545Q5VT33 79 aa7.71□□□□□ -1.18
CDCA3-206ENST00000536241 Q6ZR54 194 aa7.71□□□□□ -1.18
CDCA3-206ENST00000536241 CHCHD10Q8WYQ3 142 aaPredicted RBP7.71□□□□□ -1.18
CDCA3-206ENST00000536241 IGKV2D-24A0A075B6R9 120 aa7.7□□□□□ -1.18
CDCA3-206ENST00000536241 TINCRA0A1B0GVN0 87 aa7.7□□□□□ -1.18
CDCA3-206ENST00000536241 FAM19A3Q7Z5A8 133 aa7.7□□□□□ -1.18
CDCA3-206ENST00000536241 LYSTQ99698 3801 aa7.7□□□□□ -1.18
CDCA3-206ENST00000536241 LCE6AA0A183 80 aa7.69□□□□□ -1.18
CDCA3-206ENST00000536241 LOC105371267A0A1B0GV96 52 aa7.69□□□□□ -1.18
CDCA3-206ENST00000536241 GAGE12HA6NDE8 117 aa7.69□□□□□ -1.18
CDCA3-206ENST00000536241 C11orf86A6NJI1 115 aa7.69□□□□□ -1.18
CDCA3-206ENST00000536241 IGLC3P0DOY3 106 aa7.69□□□□□ -1.18
CDCA3-206ENST00000536241 AKR1D1P51857 326 aa7.69□□□□□ -1.18
CDCA3-206ENST00000536241 SEC11AP67812 179 aa7.69□□□□□ -1.18
CDCA3-206ENST00000536241 KRTAP26-1Q6PEX3 210 aa7.69□□□□□ -1.18
CDCA3-206ENST00000536241 C1orf43Q9BWL3 253 aa7.69□□□□□ -1.18
CDCA3-206ENST00000536241 GEMIN7Q9H840 131 aaKnown RBP7.69□□□□□ -1.18
CDCA3-206ENST00000536241 IGHV3OR16-9A0A0B4J2B5 98 aa7.68□□□□□ -1.18
CDCA3-206ENST00000536241 SCGB1D1O95968 90 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms