RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 TRAV4A0A0B4J268 109 aa12.98□□□□□ -0.33
HTATSF1-204ENST00000535601 FABP2P12104 132 aa12.98□□□□□ -0.33
HTATSF1-204ENST00000535601 EDA2RQ9HAV5 297 aa12.98□□□□□ -0.33
HTATSF1-204ENST00000535601 DAZ2Q13117 558 aaKnown RBP12.98□□□□□ -0.33
HTATSF1-204ENST00000535601 SAMD5Q5TGI4 173 aa12.98□□□□□ -0.33
HTATSF1-204ENST00000535601 NTM-AS1Q6ZSK4 140 aa12.98□□□□□ -0.33
HTATSF1-204ENST00000535601 TRGV4A0A0C4DH28 118 aa12.97□□□□□ -0.33
HTATSF1-204ENST00000535601 SMIM13P0DJ93 91 aa12.97□□□□□ -0.33
HTATSF1-204ENST00000535601 ZNF815PA8K554 130 aa12.97□□□□□ -0.33
HTATSF1-204ENST00000535601 SIVA1O15304 175 aa12.97□□□□□ -0.33
HTATSF1-204ENST00000535601 UBE2D4Q9Y2X8 147 aa12.97□□□□□ -0.33
HTATSF1-204ENST00000535601 A8MZ25 164 aa12.97□□□□□ -0.33
HTATSF1-204ENST00000535601 X6R8D5 127 aa12.96□□□□□ -0.33
HTATSF1-204ENST00000535601 NHP2Q9NX24 153 aaKnown RBP12.96□□□□□ -0.34
HTATSF1-204ENST00000535601 E9PLD3 99 aa12.95□□□□□ -0.34
HTATSF1-204ENST00000535601 G3V4G9 280 aa12.95□□□□□ -0.34
HTATSF1-204ENST00000535601 A0A096LPF7 62 aa12.95□□□□□ -0.34
HTATSF1-204ENST00000535601 MYMXA0A1B0GTQ4 84 aa12.95□□□□□ -0.34
HTATSF1-204ENST00000535601 RPL36AP83881 106 aaKnown RBP12.95□□□□□ -0.34
HTATSF1-204ENST00000535601 RPL36ALQ969Q0 106 aaKnown RBP12.95□□□□□ -0.34
HTATSF1-204ENST00000535601 TRAV8-3A0A0A6YYJ7 113 aa12.94□□□□□ -0.34
HTATSF1-204ENST00000535601 ZNF22P17026 224 aaPredicted RBP12.94□□□□□ -0.34
HTATSF1-204ENST00000535601 INSL3P51460 131 aa12.93□□□□□ -0.34
HTATSF1-204ENST00000535601 SCGB1D4Q6XE38 83 aa12.93□□□□□ -0.34
HTATSF1-204ENST00000535601 MGAM2Q2M2H8 2515 aa12.93□□□□□ -0.34
HTATSF1-204ENST00000535601 HIST1H4GQ99525 98 aa12.93□□□□□ -0.34
HTATSF1-204ENST00000535601 OR5A1Q8NGJ0 315 aa12.92□□□□□ -0.34
HTATSF1-204ENST00000535601 FHL2Q14192 279 aa12.92□□□□□ -0.34
HTATSF1-204ENST00000535601 DNAJC30Q96LL9 226 aa12.92□□□□□ -0.34
HTATSF1-204ENST00000535601 UBE2D3P61077 147 aa12.91□□□□□ -0.34
HTATSF1-204ENST00000535601 UBE2D2P62837 147 aa12.91□□□□□ -0.34
HTATSF1-204ENST00000535601 DGAT2L7PQ6IED9 249 aa12.91□□□□□ -0.34
HTATSF1-204ENST00000535601 OVOL2Q9BRP0 275 aa12.91□□□□□ -0.34
HTATSF1-204ENST00000535601 IGKV3OR2-268A0A0C4DH90 116 aa12.91□□□□□ -0.34
HTATSF1-204ENST00000535601 FAM222AQ5U5X8 452 aa12.91□□□□□ -0.34
HTATSF1-204ENST00000535601 AMELXQ99217 191 aa12.9□□□□□ -0.34
HTATSF1-204ENST00000535601 TEX48A0A1B0GUV7 120 aa12.9□□□□□ -0.34
HTATSF1-204ENST00000535601 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
HTATSF1-204ENST00000535601 IGHV4-30-4P0DP06 118 aa12.89□□□□□ -0.35
HTATSF1-204ENST00000535601 TRAV13-1A0A0B4J241 112 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 HERVK_113P61574 105 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 NFE4Q86UQ8 179 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 PRIMA1Q86XR5 153 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 CEND1Q8N111 149 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 PYGO1Q9Y3Y4 419 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 TMEM223A0PJW6 202 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 LINC01549A6NIU2 74 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 MTURNQ8N3F0 131 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 HIGD1BQ9P298 99 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 A0A0J9YY99 117 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 J3QQQ9 107 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 COX6A2Q02221 97 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 CELA1Q9UNI1 258 aa12.88□□□□□ -0.35
HTATSF1-204ENST00000535601 KRTAP10-11P60412 298 aa12.87□□□□□ -0.35
HTATSF1-204ENST00000535601 GAGE6Q13070 117 aa12.87□□□□□ -0.35
HTATSF1-204ENST00000535601 IGHV4-28A0A0C4DH34 117 aa12.86□□□□□ -0.35
HTATSF1-204ENST00000535601 C3orf56Q8N813 242 aa12.86□□□□□ -0.35
HTATSF1-204ENST00000535601 RETNQ9HD89 108 aa12.86□□□□□ -0.35
HTATSF1-204ENST00000535601 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
HTATSF1-204ENST00000535601 PAPPA-AS1Q5QFB9 102 aa12.86□□□□□ -0.35
HTATSF1-204ENST00000535601 WFDC9Q8NEX5 89 aa12.86□□□□□ -0.35
HTATSF1-204ENST00000535601 SPANXA1Q9NS26 97 aa12.86□□□□□ -0.35
HTATSF1-204ENST00000535601 HTN3P15516 51 aa12.85□□□□□ -0.35
HTATSF1-204ENST00000535601 LGALS3P17931 250 aaKnown RBP12.85□□□□□ -0.35
HTATSF1-204ENST00000535601 CDKN2A-AS1Q9UH64 79 aa12.85□□□□□ -0.35
HTATSF1-204ENST00000535601 SRSF9Q13242 221 aaKnown RBP eCLIP12.85□□□□□ -0.35
HTATSF1-204ENST00000535601 GYPEP15421 78 aa12.84□□□□□ -0.35
HTATSF1-204ENST00000535601 WFDC2Q14508 124 aa12.84□□□□□ -0.35
HTATSF1-204ENST00000535601 DAZ4Q86SG3 579 aaKnown RBP12.84□□□□□ -0.35
HTATSF1-204ENST00000535601 DAZ3Q9NR90 486 aaKnown RBP12.84□□□□□ -0.35
HTATSF1-204ENST00000535601 GTSF1LQ9H1H1 148 aa12.84□□□□□ -0.35
HTATSF1-204ENST00000535601 H3BMG7 143 aa12.83□□□□□ -0.35
HTATSF1-204ENST00000535601 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.35
HTATSF1-204ENST00000535601 MRPS36P82909 103 aaKnown RBP12.83□□□□□ -0.35
HTATSF1-204ENST00000535601 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
HTATSF1-204ENST00000535601 SFTA2Q6UW10 78 aa12.83□□□□□ -0.36
HTATSF1-204ENST00000535601 A4D1N5 150 aa12.83□□□□□ -0.36
HTATSF1-204ENST00000535601 PRB2P02812 416 aaPredicted RBP12.83□□□□□ -0.36
HTATSF1-204ENST00000535601 GEMIN7Q9H840 131 aaKnown RBP12.83□□□□□ -0.36
HTATSF1-204ENST00000535601 UBE2L6O14933 153 aa12.82□□□□□ -0.36
HTATSF1-204ENST00000535601 UBE2D1P51668 147 aa12.82□□□□□ -0.36
HTATSF1-204ENST00000535601 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
HTATSF1-204ENST00000535601 IGLL5B9A064 214 aa12.82□□□□□ -0.36
HTATSF1-204ENST00000535601 SH2D6Q7Z4S9 175 aa12.81□□□□□ -0.36
HTATSF1-204ENST00000535601 SBSPONQ8IVN8 264 aa12.81□□□□□ -0.36
HTATSF1-204ENST00000535601 CHCHD5Q9BSY4 110 aa12.81□□□□□ -0.36
HTATSF1-204ENST00000535601 TM2D2Q9BX73 214 aa12.81□□□□□ -0.36
HTATSF1-204ENST00000535601 IGLV4-60A0A075B6I1 120 aa12.81□□□□□ -0.36
HTATSF1-204ENST00000535601 TMEM243Q9BU79 118 aa12.81□□□□□ -0.36
HTATSF1-204ENST00000535601 APOC4P55056 127 aa12.8□□□□□ -0.36
HTATSF1-204ENST00000535601 NPC2P61916 151 aa12.8□□□□□ -0.36
HTATSF1-204ENST00000535601 SMAGPQ0VAQ4 97 aa12.8□□□□□ -0.36
HTATSF1-204ENST00000535601 C12orf74Q32Q52 190 aa12.8□□□□□ -0.36
HTATSF1-204ENST00000535601 C10orf126Q8N4M7 172 aa12.8□□□□□ -0.36
HTATSF1-204ENST00000535601 ETDBQ3ZM63 59 aa12.8□□□□□ -0.36
HTATSF1-204ENST00000535601 LEPROTO15243 131 aa12.8□□□□□ -0.36
HTATSF1-204ENST00000535601 CRYBA4P53673 196 aa12.79□□□□□ -0.36
HTATSF1-204ENST00000535601 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
HTATSF1-204ENST00000535601 Q8N3U1 123 aa12.79□□□□□ -0.36
HTATSF1-204ENST00000535601 KIR2DL5BQ8NHK3 375 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms