RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CGB7P0DN87 165 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 CCL3L1P16619 93 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 RPL7P18124 248 aaKnown RBP2.22□□□□□ -2.05
USP48-215ENST00000534705 UBE2D1P51668 147 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 ZNF138P52744 262 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 FXYD4P59646 89 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 RPL30P62888 115 aaKnown RBP2.22□□□□□ -2.05
USP48-215ENST00000534705 PMVKQ15126 192 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 RTL8BQ17RB0 113 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 C4orf26Q17RF5 130 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 CENPWQ5EE01 88 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 MEIG1Q5JSS6 88 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 Q5XG85 94 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 CAMK2N1Q7Z7J9 78 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 PCP2Q8IVA1 136 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 MKXQ8IYA7 352 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 DYNAPQ8N1N2 210 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 OR4C13Q8NGP0 309 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 BORCS8Q96FH0 119 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 LINC00526Q96FQ7 95 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 ZNF331Q9NQX6 463 aaPredicted RBP2.22□□□□□ -2.05
USP48-215ENST00000534705 ZNRD1Q9P1U0 126 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 ZNF492Q9P255 531 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 TGP01266 2768 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 DNAH7Q8WXX0 4024 aa2.21□□□□□ -2.05
USP48-215ENST00000534705 HUWE1Q7Z6Z7 4374 aaKnown RBP2.21□□□□□ -2.06
USP48-215ENST00000534705 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 TRBV25-1A0A075B6N4 114 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 TRBV6-1A0A0K0K1D8 114 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 TEX50A0A1B0GTY4 177 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 A8MWL6 223 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 C9JAW5 83 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 H3BP45 60 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 LY6LH3BQJ8 138 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 NPFFO15130 113 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 OR2H2O95918 312 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 TRBV12-3P01733 135 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 APOA2P02652 100 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 ATP5G1P05496 136 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 LINC00694P0DN24 101 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 IAPPP10997 89 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 CRYGAP11844 174 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 RBM11P57052 281 aaKnown RBP2.21□□□□□ -2.06
USP48-215ENST00000534705 HIST1H4AP62805 103 aaKnown RBP2.21□□□□□ -2.06
USP48-215ENST00000534705 HBBP68871 147 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 EDDM3AQ14507 147 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 ORMDL2Q53FV1 153 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 Q8IYB0 196 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 TMEM86BQ8N661 226 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 OR13C6PQ8NH95 151 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 C7orf33Q8WU49 177 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 RAB37Q96AX2 223 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 HSD17B10Q99714 261 aaKnown RBP2.21□□□□□ -2.06
USP48-215ENST00000534705 MGST2Q99735 147 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 PRADC1Q9BSG0 188 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 CHAC1Q9BUX1 264 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 SLC25A39Q9BZJ4 359 aaPredicted RBP2.21□□□□□ -2.06
USP48-215ENST00000534705 RNASE7Q9H1E1 156 aaKnown RBP2.21□□□□□ -2.06
USP48-215ENST00000534705 FBXL15Q9H469 300 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 TMEM167BQ9NRX6 74 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 C21orf62Q9NYP8 219 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 HIGD1AQ9Y241 93 aa2.21□□□□□ -2.06
USP48-215ENST00000534705 TRBV20-1A0A075B6N2 111 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 SMIM26A0A096LP01 95 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 IGKV2D-26A0A0A0MRZ7 120 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 IGHV3-74A0A0B4J1X5 117 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 TRAV5A0A0B4J249 113 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 A0A0J9YXY3 114 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 MYMXA0A1B0GTQ4 84 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 PGPA6NDG6 321 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 HIGD1CA8MV81 97 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 K7ERJ3 54 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 UQCRQO14949 82 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 CD7P09564 240 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 IGHV1-8P0DP01 117 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 DEFA4P12838 97 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 CNTFRP26992 372 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 CSN1S1P47710 185 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 HES1Q14469 280 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 PIGYQ3MUY2 71 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 C6orf99Q4VX62 202 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 SPANXN5Q5MJ07 72 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 C3orf22Q8N5N4 141 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 FAM167A-AS1Q96KT0 104 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 ZNF714Q96N38 554 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 MRPL20Q9BYC9 149 aaKnown RBP2.2□□□□□ -2.06
USP48-215ENST00000534705 C16orf95Q9H693 158 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 LINC00574Q9H8X3 128 aa2.2□□□□□ -2.06
USP48-215ENST00000534705 F11RQ9Y624 299 aaKnown RBP2.2□□□□□ -2.06
USP48-215ENST00000534705 LOC107984640A0A0U1RRK4 108 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 A6NDX4 124 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 H3BUX3 64 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 OVOL1O14753 267 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 NPYP01303 97 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 LTAP01374 205 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 IGLC6P0CF74 106 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 EDDM3BP56851 147 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 HSPE1P61604 102 aaKnown RBP2.19□□□□□ -2.06
USP48-215ENST00000534705 HERVK_113P63121 156 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms