RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 TIMM21Q9BVV7 248 aa16.07■□□□□ 0.16
SIPA1-210ENST00000534406 UBE2D4Q9Y2X8 147 aa16.07■□□□□ 0.16
SIPA1-210ENST00000534406 DYNC1H1Q14204 4646 aaKnown RBP16.06■□□□□ 0.16
SIPA1-210ENST00000534406 TRAV8-4A0A0B4J246 113 aa16.06■□□□□ 0.16
SIPA1-210ENST00000534406 K7EMI3 77 aa16.06■□□□□ 0.16
SIPA1-210ENST00000534406 RPL39P62891 51 aaKnown RBP16.06■□□□□ 0.16
SIPA1-210ENST00000534406 CSDC2Q9Y534 153 aaKnown RBP16.06■□□□□ 0.16
SIPA1-210ENST00000534406 IGKV3OR2-268A0A0C4DH90 116 aa16.05■□□□□ 0.16
SIPA1-210ENST00000534406 LRCOL1A6NCL2 159 aa16.05■□□□□ 0.16
SIPA1-210ENST00000534406 IFI27P40305 119 aaPredicted RBP16.05■□□□□ 0.16
SIPA1-210ENST00000534406 IGLV10-54A0A075B6I4 117 aa16.04■□□□□ 0.16
SIPA1-210ENST00000534406 ORMDL2Q53FV1 153 aa16.04■□□□□ 0.16
SIPA1-210ENST00000534406 MAPKAPK5-AS1Q8N8E1 139 aa16.04■□□□□ 0.16
SIPA1-210ENST00000534406 CDC42SE2Q9NRR3 84 aa16.04■□□□□ 0.16
SIPA1-210ENST00000534406 SPANXA1Q9NS26 97 aa16.04■□□□□ 0.16
SIPA1-210ENST00000534406 SPATA12Q7Z6I5 190 aa16.03■□□□□ 0.16
SIPA1-210ENST00000534406 ZNF664Q8N3J9 261 aa16.03■□□□□ 0.16
SIPA1-210ENST00000534406 BIRC6Q9NR09 4857 aa16.02■□□□□ 0.16
SIPA1-210ENST00000534406 PRSS3P2Q8NHM4 247 aa16.02■□□□□ 0.16
SIPA1-210ENST00000534406 Q6ZUT4 128 aa16.01■□□□□ 0.15
SIPA1-210ENST00000534406 BAALCQ8WXS3 180 aa16.01■□□□□ 0.15
SIPA1-210ENST00000534406 LECT2O14960 151 aa16■□□□□ 0.15
SIPA1-210ENST00000534406 WFDC2Q14508 124 aa16■□□□□ 0.15
SIPA1-210ENST00000534406 KRTAP26-1Q6PEX3 210 aa16■□□□□ 0.15
SIPA1-210ENST00000534406 CYSLTR1Q9Y271 337 aa16■□□□□ 0.15
SIPA1-210ENST00000534406 KRTAP10-2P60368 255 aa15.99■□□□□ 0.15
SIPA1-210ENST00000534406 C2orf66Q6UXQ4 117 aa15.98■□□□□ 0.15
SIPA1-210ENST00000534406 FA2HQ7L5A8 372 aa15.98■□□□□ 0.15
SIPA1-210ENST00000534406 Q8N814 137 aa15.98■□□□□ 0.15
SIPA1-210ENST00000534406 LINC00959A0A1B0GUT2 108 aa15.97■□□□□ 0.15
SIPA1-210ENST00000534406 MRPS36P82909 103 aaKnown RBP15.97■□□□□ 0.15
SIPA1-210ENST00000534406 RNASE13Q5GAN3 156 aaKnown RBP15.97■□□□□ 0.15
SIPA1-210ENST00000534406 CHCHD10Q8WYQ3 142 aaPredicted RBP15.97■□□□□ 0.15
SIPA1-210ENST00000534406 DNAH5Q8TE73 4624 aa15.96■□□□□ 0.15
SIPA1-210ENST00000534406 G0S2P27469 103 aa15.96■□□□□ 0.15
SIPA1-210ENST00000534406 C18orf32Q8TCD1 76 aa15.96■□□□□ 0.15
SIPA1-210ENST00000534406 PYGO1Q9Y3Y4 419 aa15.96■□□□□ 0.15
SIPA1-210ENST00000534406 C16orf90A8MZG2 172 aa15.95■□□□□ 0.14
SIPA1-210ENST00000534406 CDPF1Q6NVV7 123 aa15.95■□□□□ 0.14
SIPA1-210ENST00000534406 GAGE12HA6NDE8 117 aa15.94■□□□□ 0.14
SIPA1-210ENST00000534406 LINC01546A6NGU7 62 aa15.94■□□□□ 0.14
SIPA1-210ENST00000534406 SS18Q15532 418 aa15.94■□□□□ 0.14
SIPA1-210ENST00000534406 C14orf177Q52M58 125 aa15.94■□□□□ 0.14
SIPA1-210ENST00000534406 PGPEP1Q9NXJ5 209 aa15.94■□□□□ 0.14
SIPA1-210ENST00000534406 USP17L23D6RBM5 183 aa15.93■□□□□ 0.14
SIPA1-210ENST00000534406 SCO1O75880 301 aa15.93■□□□□ 0.14
SIPA1-210ENST00000534406 NTN5Q8WTR8 489 aaPredicted RBP15.93■□□□□ 0.14
SIPA1-210ENST00000534406 OPRPNQ99935 248 aaPredicted RBP15.93■□□□□ 0.14
SIPA1-210ENST00000534406 CCL25O15444 150 aa15.92■□□□□ 0.14
SIPA1-210ENST00000534406 XCL1P47992 114 aa15.92■□□□□ 0.14
SIPA1-210ENST00000534406 FAM104AQ969W3 186 aa15.92■□□□□ 0.14
SIPA1-210ENST00000534406 IGLV4-3A0A075B6K6 122 aa15.91■□□□□ 0.14
SIPA1-210ENST00000534406 TRAV13-1A0A0B4J241 112 aa15.91■□□□□ 0.14
SIPA1-210ENST00000534406 COLCA2A8K830 154 aa15.91■□□□□ 0.14
SIPA1-210ENST00000534406 FUSP35637 526 aaKnown RBP eCLIP15.91■□□□□ 0.14
SIPA1-210ENST00000534406 TOMM6Q96B49 74 aa15.91■□□□□ 0.14
SIPA1-210ENST00000534406 TMEM141Q96I45 108 aa15.91■□□□□ 0.14
SIPA1-210ENST00000534406 AP5S1Q9NUS5 200 aa15.91■□□□□ 0.14
SIPA1-210ENST00000534406 IFITM10A6NMD0 228 aa15.9■□□□□ 0.14
SIPA1-210ENST00000534406 LRP1BQ9NZR2 4599 aa15.9■□□□□ 0.14
SIPA1-210ENST00000534406 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.89■□□□□ 0.13
SIPA1-210ENST00000534406 IGLV5-52A0A0A0MRZ9 124 aa15.89■□□□□ 0.13
SIPA1-210ENST00000534406 C1orf196B1AJZ1 125 aa15.89■□□□□ 0.13
SIPA1-210ENST00000534406 TRGC2P03986 189 aa15.89■□□□□ 0.13
SIPA1-210ENST00000534406 NPSP0C0P6 89 aa15.89■□□□□ 0.13
SIPA1-210ENST00000534406 Q6ZN92 141 aa15.89■□□□□ 0.13
SIPA1-210ENST00000534406 LINC01549A6NIU2 74 aa15.88■□□□□ 0.13
SIPA1-210ENST00000534406 RAB5BP61020 215 aa15.88■□□□□ 0.13
SIPA1-210ENST00000534406 FOXI1Q12951 378 aa15.88■□□□□ 0.13
SIPA1-210ENST00000534406 IGIPA6NJ69 53 aa15.87■□□□□ 0.13
SIPA1-210ENST00000534406 CD164L2Q6UWJ8 174 aa15.87■□□□□ 0.13
SIPA1-210ENST00000534406 TEX43Q6ZNM6 134 aa15.87■□□□□ 0.13
SIPA1-210ENST00000534406 TIMM17AQ99595 171 aa15.87■□□□□ 0.13
SIPA1-210ENST00000534406 LINC00614P0C842 121 aa15.86■□□□□ 0.13
SIPA1-210ENST00000534406 URB1-AS1Q96HZ7 61 aa15.86■□□□□ 0.13
SIPA1-210ENST00000534406 ATP6V1G1O75348 118 aa15.85■□□□□ 0.13
SIPA1-210ENST00000534406 PAPPA-AS1Q5QFB9 102 aa15.85■□□□□ 0.13
SIPA1-210ENST00000534406 SCGB3A1Q96QR1 104 aa15.85■□□□□ 0.13
SIPA1-210ENST00000534406 C2orf88Q9BSF0 95 aa15.85■□□□□ 0.13
SIPA1-210ENST00000534406 S100A1P23297 94 aa15.84■□□□□ 0.13
SIPA1-210ENST00000534406 CFAP161Q6P656 301 aa15.84■□□□□ 0.13
SIPA1-210ENST00000534406 ERASQ7Z444 233 aa15.84■□□□□ 0.13
SIPA1-210ENST00000534406 PRSS1P07477 247 aa15.83■□□□□ 0.12
SIPA1-210ENST00000534406 VCX2Q9H322 139 aa15.83■□□□□ 0.12
SIPA1-210ENST00000534406 LINC00173Q6ZV60 143 aa15.82■□□□□ 0.12
SIPA1-210ENST00000534406 C15orf56Q8N910 161 aa15.82■□□□□ 0.12
SIPA1-210ENST00000534406 AMELXQ99217 191 aa15.82■□□□□ 0.12
SIPA1-210ENST00000534406 COX7A2LO14548 114 aa15.81■□□□□ 0.12
SIPA1-210ENST00000534406 HBDP02042 147 aa15.81■□□□□ 0.12
SIPA1-210ENST00000534406 hDV102S1A0JD36 115 aa15.8■□□□□ 0.12
SIPA1-210ENST00000534406 GCSHP23434 173 aa15.8■□□□□ 0.12
SIPA1-210ENST00000534406 CHCHD1Q96BP2 118 aaKnown RBP15.8■□□□□ 0.12
SIPA1-210ENST00000534406 A0A096LNJ9 63 aa15.79■□□□□ 0.12
SIPA1-210ENST00000534406 ZC2HC1BQ5TFG8 222 aa15.79■□□□□ 0.12
SIPA1-210ENST00000534406 BAGE3Q86Y29 109 aa15.79■□□□□ 0.12
SIPA1-210ENST00000534406 IGHV1-58A0A0C4DH39 117 aa15.78■□□□□ 0.12
SIPA1-210ENST00000534406 UBE2D1P51668 147 aa15.78■□□□□ 0.12
SIPA1-210ENST00000534406 PMCHL1Q16048 86 aa15.78■□□□□ 0.12
SIPA1-210ENST00000534406 MALP21145 153 aa15.77■□□□□ 0.12
SIPA1-210ENST00000534406 HIGD2BQ4VC39 106 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms