RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 FUT9Q9Y231 359 aa2.78□□□□□ -1.96
CASP4-213ENST00000534356 TRGV2A0A075B6R0 118 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 TRAV5A0A0B4J249 113 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 C8orf87E5RJ46 101 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 H3BNG1 76 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 K7ERU9 68 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 SSNA1O43805 119 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 HPGDSO60760 199 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 CRYGDP07320 174 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 ZNF25P17030 456 aaPredicted RBP2.77□□□□□ -1.97
CASP4-213ENST00000534356 DDTP30046 118 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 CRYBA4P53673 196 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 RAB5BP61020 215 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 ZNF846Q147U1 533 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 AMMECR1LQ6DCA0 310 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 FAM231DQ6ZW35 169 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 LYZL2Q7Z4W2 148 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 ZNF431Q8TF32 576 aaPredicted RBP2.77□□□□□ -1.97
CASP4-213ENST00000534356 TRGV9Q99603 122 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 LINC00467Q9BRT7 94 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 TMEM222Q9H0R3 208 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 SPANXB1Q9NS25 103 aaPredicted RBP2.77□□□□□ -1.97
CASP4-213ENST00000534356 COMMD3Q9UBI1 195 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 LY96Q9Y6Y9 160 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 TMEM56-RWDD3S4R434 201 aa2.77□□□□□ -1.97
CASP4-213ENST00000534356 MUC2Q02817 5179 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 H3BQ15 152 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 H3BRN7 92 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 H7BYZ3 331 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 M0R143 59 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 SPINK4O60575 86 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 CXorf1O96002 111 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 C1QBP02746 253 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 RNASE4P34096 147 aaKnown RBP2.76□□□□□ -1.97
CASP4-213ENST00000534356 AKR1C3P42330 323 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 NEDD8Q15843 81 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 SCGB2B2Q4G0G5 96 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 UBE2NLQ5JXB2 153 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 ANAPC13Q9BS18 74 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 NAA60Q9H7X0 242 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 HHLA3Q9XRX5 114 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 ICOSQ9Y6W8 199 aa2.76□□□□□ -1.97
CASP4-213ENST00000534356 TRAV8-3A0A0A6YYJ7 113 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 TGIF2-C20orf24A0A0A6YYL0 155 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 TINCRA0A1B0GVN0 87 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 C20orf202A1L168 122 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 M0R3E3 92 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 PSCAO43653 123 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 PDE6DO43924 150 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 SULT1A3P0DMM9 295 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 SULT1A4P0DMN0 295 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 AKR1C4P17516 323 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 RAB5CP51148 216 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 NCS1P62166 190 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 SAMD13Q5VXD3 122 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 IZUMO2Q6UXV1 221 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 S100A7AQ86SG5 101 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 BTF3L4Q96K17 158 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 CCDC32Q9BV29 185 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 MED9Q9NWA0 146 aa2.75□□□□□ -1.97
CASP4-213ENST00000534356 FAT4Q6V0I7 4981 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 CRYM-AS1A6NIL9 109 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 IBA57-AS1B1ANH7 110 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 GABARAPH6UMI1 98 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 PITX3O75364 302 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 IFNA7P01567 189 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 OR5G3P0C626 314 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 EVI2AP22794 236 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 DEFA1P59665 94 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 DEFA3P59666 94 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 RRAS2P62070 204 aaPredicted RBP2.74□□□□□ -1.97
CASP4-213ENST00000534356 CYP2G1PQ6ZSU1 146 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 FAM19A3Q7Z5A8 133 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 COMMD7Q86VX2 200 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 ASB13Q8WXK3 278 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 TMEM147Q9BVK8 224 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 MRPL32Q9BYC8 188 aaKnown RBP2.74□□□□□ -1.97
CASP4-213ENST00000534356 AGPAT4-IT1Q9H0P7 198 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 PRO0255Q9UI72 69 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 U3KQ87 197 aa2.74□□□□□ -1.97
CASP4-213ENST00000534356 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 TRGV4A0A0C4DH28 118 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 C7orf71A4D174 169 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 PGPA6NDG6 321 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 C1orf196B1AJZ1 125 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 H3BQ85 93 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 COX7A2P2O60397 106 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 HYPMO75409 117 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 TYMSP04818 313 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 IL5P05113 134 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 IL7P13232 177 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 S100A2P29034 98 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 SRIP30626 198 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 TCL1AP56279 114 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 RPL37AP61513 92 aaKnown RBP2.73□□□□□ -1.97
CASP4-213ENST00000534356 SLC38A11Q08AI6 406 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 CLLU1Q5K131 121 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 SPANXN5Q5MJ07 72 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 LELP1Q5T871 98 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms