RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 MRPL16Q9NX20 251 aaKnown RBP5.03□□□□□ -1.6
RNPC3-209ENST00000533834 NDUFA7O95182 113 aa5.03□□□□□ -1.6
RNPC3-209ENST00000533834 SOSTDC1Q6X4U4 206 aa5.03□□□□□ -1.6
RNPC3-209ENST00000533834 MUSTN1Q8IVN3 82 aa5.02□□□□□ -1.61
RNPC3-209ENST00000533834 TMEM101Q96IK0 257 aa5.02□□□□□ -1.61
RNPC3-209ENST00000533834 A4D1N5 150 aa5.02□□□□□ -1.61
RNPC3-209ENST00000533834 SMIM1B2RUZ4 78 aa5.02□□□□□ -1.61
RNPC3-209ENST00000533834 NDUFA1O15239 70 aa5.02□□□□□ -1.61
RNPC3-209ENST00000533834 IGHV3-73A0A0B4J1V6 119 aa5.02□□□□□ -1.61
RNPC3-209ENST00000533834 TRAV4A0A0B4J268 109 aa5.02□□□□□ -1.61
RNPC3-209ENST00000533834 DEFB121Q5J5C9 76 aa5.02□□□□□ -1.61
RNPC3-209ENST00000533834 C1QTNF4Q9BXJ3 329 aa5.02□□□□□ -1.61
RNPC3-209ENST00000533834 EPG5Q9HCE0 2579 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.01□□□□□ -1.61
RNPC3-209ENST00000533834 TRBV30A0A0K0K1B3 111 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 IGKV2-29A2NJV5 120 aaPredicted RBP5.01□□□□□ -1.61
RNPC3-209ENST00000533834 CCL24O00175 119 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 INSP01308 110 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 PLA2G2AP14555 144 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 CDC42SE2Q9NRR3 84 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 K7ERU9 68 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 MIAQ16674 131 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 SDIM1Q6ZPB5 146 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 Q6ZTI0 123 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 WFDC10AQ9H1F0 79 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 GCN1Q92616 2671 aaKnown RBP5.01□□□□□ -1.61
RNPC3-209ENST00000533834 FOXI1Q12951 378 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 SHISA2Q6UWI4 295 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 CDKN2A-AS1Q9UH64 79 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 ABCA12Q86UK0 2595 aa5.01□□□□□ -1.61
RNPC3-209ENST00000533834 LRRK2Q5S007 2527 aa5□□□□□ -1.61
RNPC3-209ENST00000533834 TRBV10-1A0A0K0K1A3 114 aa5□□□□□ -1.61
RNPC3-209ENST00000533834 HILS1P60008 231 aa5□□□□□ -1.61
RNPC3-209ENST00000533834 ZFYVE26Q68DK2 2539 aa5□□□□□ -1.61
RNPC3-209ENST00000533834 RNASE13Q5GAN3 156 aaKnown RBP5□□□□□ -1.61
RNPC3-209ENST00000533834 PRO1854Q9UHT4 67 aa5□□□□□ -1.61
RNPC3-209ENST00000533834 DNAH10Q8IVF4 4471 aa5□□□□□ -1.61
RNPC3-209ENST00000533834 PRKDCP78527 4128 aaKnown RBP5□□□□□ -1.61
RNPC3-209ENST00000533834 FHL2Q14192 279 aa5□□□□□ -1.61
RNPC3-209ENST00000533834 UNC79Q9P2D8 2635 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 CSPG4Q6UVK1 2322 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 GAGE13Q4V321 117 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 MTURNQ8N3F0 131 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 HIVEP1P15822 2718 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 F5H697 171 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 K7EQD1 137 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 TRIAP1O43715 76 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 RPL13AP40429 203 aaKnown RBP4.99□□□□□ -1.61
RNPC3-209ENST00000533834 TMEM170BQ5T4T1 132 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 TSSC4Q9Y5U2 329 aaPredicted RBP4.99□□□□□ -1.61
RNPC3-209ENST00000533834 X6R8D5 127 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 ETDBQ3ZM63 59 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 LINC00482Q8N8I6 264 aa4.99□□□□□ -1.61
RNPC3-209ENST00000533834 ACACBO00763 2458 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 PTPN13Q12923 2485 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 SCGB1A1P11684 91 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 HERVK_113P61574 105 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 VCX2Q9H322 139 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 IGHV3-38A0A0C4DH36 116 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 LOC107984156A0A0G2JMH3 177 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 LOC100131303A0A0U1RQF7 123 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 TRBV6-4A0A1B0GX49 114 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 ARL17AQ8IVW1 177 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 CITED1Q99966 193 aa4.98□□□□□ -1.61
RNPC3-209ENST00000533834 TRBV20-1A0A075B6N2 111 aa4.97□□□□□ -1.61
RNPC3-209ENST00000533834 DAZ4Q86SG3 579 aaKnown RBP4.97□□□□□ -1.61
RNPC3-209ENST00000533834 DAZ3Q9NR90 486 aaKnown RBP4.97□□□□□ -1.61
RNPC3-209ENST00000533834 XCL2Q9UBD3 114 aa4.97□□□□□ -1.61
RNPC3-209ENST00000533834 TMEM238LA0A1B0GVL6 79 aa4.97□□□□□ -1.61
RNPC3-209ENST00000533834 GAGE12HA6NDE8 117 aa4.97□□□□□ -1.61
RNPC3-209ENST00000533834 A6NJY4 79 aa4.97□□□□□ -1.61
RNPC3-209ENST00000533834 H7C423 109 aa4.97□□□□□ -1.61
RNPC3-209ENST00000533834 SPINK8P0C7L1 97 aa4.97□□□□□ -1.61
RNPC3-209ENST00000533834 TEN1Q86WV5 123 aa4.97□□□□□ -1.61
RNPC3-209ENST00000533834 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
RNPC3-209ENST00000533834 C21orf62-AS1Q17RA5 79 aa4.96□□□□□ -1.61
RNPC3-209ENST00000533834 NSD1Q96L73 2696 aaPredicted RBP4.96□□□□□ -1.62
RNPC3-209ENST00000533834 IGKV2-28A0A075B6P5 120 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 IGHV3-64A0A075B6Q5 118 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 IGHV3OR16-9A0A0B4J2B5 98 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 IGKV2D-28P01615 120 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 KIR2DL5BQ8NHK3 375 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 LINC01587Q99440 93 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 FBN1P35555 2871 aaKnown RBP4.96□□□□□ -1.62
RNPC3-209ENST00000533834 TMEM238C9JI98 176 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 RNF151Q2KHN1 245 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 C16orf74Q96GX8 76 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 TNFRSF18Q9Y5U5 241 aa4.96□□□□□ -1.62
RNPC3-209ENST00000533834 CIDEAO60543 219 aa4.95□□□□□ -1.62
RNPC3-209ENST00000533834 LGALS3P17931 250 aaKnown RBP4.95□□□□□ -1.62
RNPC3-209ENST00000533834 ANKRD29Q8N6D5 301 aa4.95□□□□□ -1.62
RNPC3-209ENST00000533834 XGP55808 180 aa4.95□□□□□ -1.62
RNPC3-209ENST00000533834 LINC00308Q8TCZ7 52 aa4.95□□□□□ -1.62
RNPC3-209ENST00000533834 SIGMAR1Q99720 223 aa4.95□□□□□ -1.62
RNPC3-209ENST00000533834 NDUFA12Q9UI09 145 aa4.95□□□□□ -1.62
RNPC3-209ENST00000533834 SPG11Q96JI7 2443 aa4.95□□□□□ -1.62
RNPC3-209ENST00000533834 IGLV4-60A0A075B6I1 120 aa4.95□□□□□ -1.62
RNPC3-209ENST00000533834 LST1O00453 97 aa4.94□□□□□ -1.62
RNPC3-209ENST00000533834 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms