RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, human

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBXN1-215	ENST00000533476		Q6ZUT4	128 aa		13.82	□□□□□ -0.2
UBXN1-215	ENST00000533476	C10orf126	Q8N4M7	172 aa		13.82	□□□□□ -0.2
UBXN1-215	ENST00000533476	C16orf74	Q96GX8	76 aa		13.82	□□□□□ -0.2
UBXN1-215	ENST00000533476	TIMM21	Q9BVV7	248 aa		13.82	□□□□□ -0.2
UBXN1-215	ENST00000533476	MTOR	P42345	2549 aa		13.82	□□□□□ -0.2
UBXN1-215	ENST00000533476	TRBV20-1	A0A075B6N2	111 aa		13.82	□□□□□ -0.2
UBXN1-215	ENST00000533476	IGHV3-64	A0A075B6Q5	118 aa		13.82	□□□□□ -0.2
UBXN1-215	ENST00000533476		K7EQD1	137 aa		13.82	□□□□□ -0.2
UBXN1-215	ENST00000533476	C1QTNF4	Q9BXJ3	329 aa		13.82	□□□□□ -0.2
UBXN1-215	ENST00000533476	SH2D6	Q7Z4S9	175 aa		13.81	□□□□□ -0.2
UBXN1-215	ENST00000533476	IGHV3-30-3	P0DP02	117 aa		13.8	□□□□□ -0.2
UBXN1-215	ENST00000533476	RPL35A	P18077	110 aa	Known RBP	13.8	□□□□□ -0.2
UBXN1-215	ENST00000533476	PRO1854	Q9UHT4	67 aa		13.8	□□□□□ -0.2
UBXN1-215	ENST00000533476	PLAC8L1	A1L4L8	177 aa		13.8	□□□□□ -0.2
UBXN1-215	ENST00000533476	RPL36A	P83881	106 aa	Known RBP	13.8	□□□□□ -0.2
UBXN1-215	ENST00000533476	RPL36AL	Q969Q0	106 aa	Known RBP	13.8	□□□□□ -0.2
UBXN1-215	ENST00000533476	NOP10	Q9NPE3	64 aa	Known RBP	13.8	□□□□□ -0.2
UBXN1-215	ENST00000533476	LOC107984156	A0A0G2JMH3	177 aa		13.79	□□□□□ -0.2
UBXN1-215	ENST00000533476	ARL17A	Q8IVW1	177 aa		13.79	□□□□□ -0.2
UBXN1-215	ENST00000533476	CSNK1G2-AS1	Q8NCQ2	148 aa		13.79	□□□□□ -0.2
UBXN1-215	ENST00000533476	SPATA25	Q9BR10	227 aa		13.79	□□□□□ -0.2
UBXN1-215	ENST00000533476	TMEM238	C9JI98	176 aa		13.78	□□□□□ -0.2
UBXN1-215	ENST00000533476	DAZ4	Q86SG3	579 aa	Known RBP	13.78	□□□□□ -0.2
UBXN1-215	ENST00000533476	DAZ3	Q9NR90	486 aa	Known RBP	13.78	□□□□□ -0.2
UBXN1-215	ENST00000533476	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.78	□□□□□ -0.2
UBXN1-215	ENST00000533476		A0A0B4J2C4	111 aa		13.78	□□□□□ -0.2
UBXN1-215	ENST00000533476	IGHV1-58	A0A0C4DH39	117 aa		13.78	□□□□□ -0.2
UBXN1-215	ENST00000533476	PSMB2	P49721	201 aa		13.78	□□□□□ -0.2
UBXN1-215	ENST00000533476	KRTAP10-3	P60369	221 aa		13.78	□□□□□ -0.2
UBXN1-215	ENST00000533476	LY6G6D	O95868	133 aa		13.77	□□□□□ -0.21
UBXN1-215	ENST00000533476	SCGB1A1	P11684	91 aa		13.77	□□□□□ -0.21
UBXN1-215	ENST00000533476	GAGE12H	A6NDE8	117 aa		13.76	□□□□□ -0.21
UBXN1-215	ENST00000533476	SMCP	P49901	116 aa	Predicted RBP	13.76	□□□□□ -0.21
UBXN1-215	ENST00000533476	SIGMAR1	Q99720	223 aa		13.76	□□□□□ -0.21
UBXN1-215	ENST00000533476		A0A0J9YXY3	114 aa		13.76	□□□□□ -0.21
UBXN1-215	ENST00000533476	SBSPON	Q8IVN8	264 aa		13.76	□□□□□ -0.21
UBXN1-215	ENST00000533476	VSIG2	Q96IQ7	327 aa		13.76	□□□□□ -0.21
UBXN1-215	ENST00000533476	OVOL2	Q9BRP0	275 aa		13.76	□□□□□ -0.21
UBXN1-215	ENST00000533476	TRAV8-3	A0A0A6YYJ7	113 aa		13.75	□□□□□ -0.21
UBXN1-215	ENST00000533476	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.75	□□□□□ -0.21
UBXN1-215	ENST00000533476		A4D1N5	150 aa		13.75	□□□□□ -0.21
UBXN1-215	ENST00000533476	DGAT2L7P	Q6IED9	249 aa		13.75	□□□□□ -0.21
UBXN1-215	ENST00000533476	GEMIN7	Q9H840	131 aa	Known RBP	13.75	□□□□□ -0.21
UBXN1-215	ENST00000533476	IGLV5-45	A0A087WSX0	123 aa		13.74	□□□□□ -0.21
UBXN1-215	ENST00000533476	CIDEA	O60543	219 aa		13.74	□□□□□ -0.21
UBXN1-215	ENST00000533476	TIRAP	P58753	221 aa		13.74	□□□□□ -0.21
UBXN1-215	ENST00000533476	LINC00482	Q8N8I6	264 aa		13.74	□□□□□ -0.21
UBXN1-215	ENST00000533476	PF4	P02776	101 aa		13.74	□□□□□ -0.21
UBXN1-215	ENST00000533476	FOXI1	Q12951	378 aa		13.74	□□□□□ -0.21
UBXN1-215	ENST00000533476	MTURN	Q8N3F0	131 aa		13.74	□□□□□ -0.21
UBXN1-215	ENST00000533476	CSDC2	Q9Y534	153 aa	Known RBP	13.74	□□□□□ -0.21
UBXN1-215	ENST00000533476	GAGE7	O76087	117 aa		13.73	□□□□□ -0.21
UBXN1-215	ENST00000533476	TCL1B	O95988	128 aa		13.73	□□□□□ -0.21
UBXN1-215	ENST00000533476	IGHV3-33	P01772	117 aa		13.73	□□□□□ -0.21
UBXN1-215	ENST00000533476	GAGE12F	P0CL80	117 aa		13.73	□□□□□ -0.21
UBXN1-215	ENST00000533476	GAGE12G	P0CL81	117 aa		13.73	□□□□□ -0.21
UBXN1-215	ENST00000533476	GAGE12I	P0CL82	117 aa		13.73	□□□□□ -0.21
UBXN1-215	ENST00000533476	NTM-AS1	Q6ZSK4	140 aa		13.73	□□□□□ -0.21
UBXN1-215	ENST00000533476	HIVEP2	P31629	2446 aa		13.73	□□□□□ -0.21
UBXN1-215	ENST00000533476	TRGV2	A0A075B6R0	118 aa		13.72	□□□□□ -0.21
UBXN1-215	ENST00000533476	GAGE12J	A6NER3	117 aa		13.72	□□□□□ -0.21
UBXN1-215	ENST00000533476	SPINK8	P0C7L1	97 aa		13.72	□□□□□ -0.21
UBXN1-215	ENST00000533476	GAGE4	Q13068	117 aa		13.72	□□□□□ -0.21
UBXN1-215	ENST00000533476	GAGE5	Q13069	117 aa		13.72	□□□□□ -0.21
UBXN1-215	ENST00000533476	MUSTN1	Q8IVN3	82 aa		13.72	□□□□□ -0.21
UBXN1-215	ENST00000533476	LINC00694	P0DN24	101 aa		13.72	□□□□□ -0.21
UBXN1-215	ENST00000533476	NDUFA12	Q9UI09	145 aa		13.72	□□□□□ -0.21
UBXN1-215	ENST00000533476		M0QXV9	152 aa		13.71	□□□□□ -0.21
UBXN1-215	ENST00000533476	SMAGP	Q0VAQ4	97 aa		13.71	□□□□□ -0.21
UBXN1-215	ENST00000533476	FAM19A3	Q7Z5A8	133 aa		13.71	□□□□□ -0.21
UBXN1-215	ENST00000533476	LITAF	Q99732	161 aa		13.71	□□□□□ -0.21
UBXN1-215	ENST00000533476	NIPBL	Q6KC79	2804 aa	eCLIP	13.71	□□□□□ -0.21
UBXN1-215	ENST00000533476	JMJD1C	Q15652	2540 aa		13.71	□□□□□ -0.22
UBXN1-215	ENST00000533476	TRBV6-4	A0A1B0GX49	114 aa		13.7	□□□□□ -0.22
UBXN1-215	ENST00000533476	SPANXD	Q9BXN6	97 aa		13.7	□□□□□ -0.22
UBXN1-215	ENST00000533476	GTSF1L	Q9H1H1	148 aa		13.7	□□□□□ -0.22
UBXN1-215	ENST00000533476	SPANXC	Q9NY87	97 aa		13.7	□□□□□ -0.22
UBXN1-215	ENST00000533476	CDKN2A-AS1	Q9UH64	79 aa		13.7	□□□□□ -0.22
UBXN1-215	ENST00000533476	ERG28	Q9UKR5	140 aa		13.7	□□□□□ -0.22
UBXN1-215	ENST00000533476	EIF4EBP3	O60516	100 aa	Predicted RBP	13.7	□□□□□ -0.22
UBXN1-215	ENST00000533476	ZFAND6	Q6FIF0	208 aa		13.7	□□□□□ -0.22
UBXN1-215	ENST00000533476	NSD1	Q96L73	2696 aa	Predicted RBP	13.69	□□□□□ -0.22
UBXN1-215	ENST00000533476	SCGB1C2	P0DMR2	95 aa		13.69	□□□□□ -0.22
UBXN1-215	ENST00000533476	HERVK_113	P63121	156 aa		13.69	□□□□□ -0.22
UBXN1-215	ENST00000533476	SFTA2	Q6UW10	78 aa		13.69	□□□□□ -0.22
UBXN1-215	ENST00000533476	TEN1	Q86WV5	123 aa		13.69	□□□□□ -0.22
UBXN1-215	ENST00000533476	INSL3	P51460	131 aa		13.68	□□□□□ -0.22
UBXN1-215	ENST00000533476	PPDPFL	Q8WWR9	84 aa		13.68	□□□□□ -0.22
UBXN1-215	ENST00000533476	RNF183	Q96D59	192 aa		13.68	□□□□□ -0.22
UBXN1-215	ENST00000533476	LINC00242	Q5T6M2	205 aa		13.67	□□□□□ -0.22
UBXN1-215	ENST00000533476	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.67	□□□□□ -0.22
UBXN1-215	ENST00000533476		A8MZ25	164 aa		13.66	□□□□□ -0.22
UBXN1-215	ENST00000533476	TIMM17B	O60830	172 aa		13.66	□□□□□ -0.22
UBXN1-215	ENST00000533476	TMEM243	Q9BU79	118 aa		13.66	□□□□□ -0.22
UBXN1-215	ENST00000533476	FN1	P02751	2386 aa	Known RBP	13.66	□□□□□ -0.22
UBXN1-215	ENST00000533476	TRGV4	A0A0C4DH28	118 aa		13.66	□□□□□ -0.22
UBXN1-215	ENST00000533476	COX6A2	Q02221	97 aa		13.66	□□□□□ -0.22
UBXN1-215	ENST00000533476	CDC42SE2	Q9NRR3	84 aa		13.66	□□□□□ -0.22
UBXN1-215	ENST00000533476	IGLV5-39	A0A0G2JS06	123 aa		13.65	□□□□□ -0.22
UBXN1-215	ENST00000533476	TMEM101	Q96IK0	257 aa		13.65	□□□□□ -0.22

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