RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 PCSK5Q92824 1860 aa8.42□□□□□ -1.06
CSRP1-215ENST00000532313 SOCS3O14543 225 aa8.42□□□□□ -1.06
CSRP1-215ENST00000532313 FUSP35637 526 aaKnown RBP eCLIP8.42□□□□□ -1.06
CSRP1-215ENST00000532313 RBMY1FQ15415 496 aaKnown RBP8.42□□□□□ -1.06
CSRP1-215ENST00000532313 HECTD1Q9ULT8 2610 aa8.41□□□□□ -1.06
CSRP1-215ENST00000532313 OPRPNQ99935 248 aaPredicted RBP8.41□□□□□ -1.06
CSRP1-215ENST00000532313 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
CSRP1-215ENST00000532313 H3BUT2 72 aa8.41□□□□□ -1.06
CSRP1-215ENST00000532313 TRBV20-1A0A075B6N2 111 aa8.41□□□□□ -1.06
CSRP1-215ENST00000532313 C2orf82Q6UX34 121 aa8.41□□□□□ -1.06
CSRP1-215ENST00000532313 BAALCQ8WXS3 180 aa8.41□□□□□ -1.06
CSRP1-215ENST00000532313 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
CSRP1-215ENST00000532313 MDFIQ99750 246 aa8.4□□□□□ -1.06
CSRP1-215ENST00000532313 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.06
CSRP1-215ENST00000532313 ODF1Q14990 250 aa8.39□□□□□ -1.07
CSRP1-215ENST00000532313 SBSPONQ8IVN8 264 aa8.39□□□□□ -1.07
CSRP1-215ENST00000532313 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
CSRP1-215ENST00000532313 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
CSRP1-215ENST00000532313 MRPS12O15235 138 aaKnown RBP8.39□□□□□ -1.07
CSRP1-215ENST00000532313 NDUFB1O75438 58 aa8.39□□□□□ -1.07
CSRP1-215ENST00000532313 KIR3DS1Q14943 382 aa8.38□□□□□ -1.07
CSRP1-215ENST00000532313 KRTAP1-3Q8IUG1 177 aa8.38□□□□□ -1.07
CSRP1-215ENST00000532313 A4D1N5 150 aa8.38□□□□□ -1.07
CSRP1-215ENST00000532313 C9orf153Q5TBE3 101 aa8.38□□□□□ -1.07
CSRP1-215ENST00000532313 IBA57-AS1B1ANH7 110 aa8.37□□□□□ -1.07
CSRP1-215ENST00000532313 FHL2Q14192 279 aa8.37□□□□□ -1.07
CSRP1-215ENST00000532313 IGLV2-8P01709 118 aa8.37□□□□□ -1.07
CSRP1-215ENST00000532313 LRCOL1A6NCL2 159 aa8.37□□□□□ -1.07
CSRP1-215ENST00000532313 ORMDL1Q9P0S3 153 aa8.37□□□□□ -1.07
CSRP1-215ENST00000532313 ACANP16112 2415 aa8.37□□□□□ -1.07
CSRP1-215ENST00000532313 A0A1B0GXF2 115 aa8.36□□□□□ -1.07
CSRP1-215ENST00000532313 IGLV2-11P01706 119 aa8.36□□□□□ -1.07
CSRP1-215ENST00000532313 COX8AP10176 69 aa8.36□□□□□ -1.07
CSRP1-215ENST00000532313 EDN2P20800 178 aa8.36□□□□□ -1.07
CSRP1-215ENST00000532313 DEFB105AQ8NG35 78 aa8.36□□□□□ -1.07
CSRP1-215ENST00000532313 FAM19A1Q7Z5A9 133 aa8.36□□□□□ -1.07
CSRP1-215ENST00000532313 PRR9Q5T870 116 aa8.36□□□□□ -1.07
CSRP1-215ENST00000532313 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
CSRP1-215ENST00000532313 PLXNB1O43157 2135 aa8.35□□□□□ -1.07
CSRP1-215ENST00000532313 HELZ2Q9BYK8 2649 aaKnown RBP8.35□□□□□ -1.07
CSRP1-215ENST00000532313 LINC00959A0A1B0GUT2 108 aa8.35□□□□□ -1.07
CSRP1-215ENST00000532313 COX7BP24311 80 aa8.35□□□□□ -1.07
CSRP1-215ENST00000532313 KLK9Q2XQG4 91 aa8.35□□□□□ -1.07
CSRP1-215ENST00000532313 MRPL52Q86TS9 123 aaKnown RBP8.35□□□□□ -1.07
CSRP1-215ENST00000532313 HCFC1P51610 2035 aa8.35□□□□□ -1.07
CSRP1-215ENST00000532313 MIR7-3HGQ8N6C7 128 aa8.35□□□□□ -1.07
CSRP1-215ENST00000532313 LYPD5Q6UWN5 251 aa8.34□□□□□ -1.07
CSRP1-215ENST00000532313 HIGD2AQ9BW72 106 aa8.34□□□□□ -1.07
CSRP1-215ENST00000532313 E9PLD3 99 aa8.34□□□□□ -1.07
CSRP1-215ENST00000532313 CRIP1P50238 77 aa8.34□□□□□ -1.07
CSRP1-215ENST00000532313 C12orf74Q32Q52 190 aa8.34□□□□□ -1.07
CSRP1-215ENST00000532313 LOC100131303A0A0U1RQF7 123 aa8.34□□□□□ -1.08
CSRP1-215ENST00000532313 NCR3O14931 201 aa8.34□□□□□ -1.08
CSRP1-215ENST00000532313 UBL5Q9BZL1 73 aa8.34□□□□□ -1.08
CSRP1-215ENST00000532313 LECT2O14960 151 aa8.33□□□□□ -1.08
CSRP1-215ENST00000532313 TRBV30A0A0K0K1B3 111 aa8.33□□□□□ -1.08
CSRP1-215ENST00000532313 FAM19A5Q7Z5A7 132 aaPredicted RBP8.33□□□□□ -1.08
CSRP1-215ENST00000532313 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
CSRP1-215ENST00000532313 RPL28P46779 137 aaKnown RBP8.33□□□□□ -1.08
CSRP1-215ENST00000532313 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
CSRP1-215ENST00000532313 CNFNQ9BYD5 112 aa8.33□□□□□ -1.08
CSRP1-215ENST00000532313 COX8CQ7Z4L0 72 aa8.32□□□□□ -1.08
CSRP1-215ENST00000532313 COX17Q14061 63 aa8.32□□□□□ -1.08
CSRP1-215ENST00000532313 TANC2Q9HCD6 1990 aa8.32□□□□□ -1.08
CSRP1-215ENST00000532313 KRTAP1-1Q07627 177 aa8.32□□□□□ -1.08
CSRP1-215ENST00000532313 MPV17L2Q567V2 206 aa8.32□□□□□ -1.08
CSRP1-215ENST00000532313 A8MZ25 164 aa8.32□□□□□ -1.08
CSRP1-215ENST00000532313 EGFEM1PQ0D2K5 195 aa8.32□□□□□ -1.08
CSRP1-215ENST00000532313 SPANXCQ9NY87 97 aa8.31□□□□□ -1.08
CSRP1-215ENST00000532313 OCIAD2Q56VL3 154 aa8.31□□□□□ -1.08
CSRP1-215ENST00000532313 IGKV2D-26A0A0A0MRZ7 120 aa8.31□□□□□ -1.08
CSRP1-215ENST00000532313 A0A1B0GUV1 79 aa8.31□□□□□ -1.08
CSRP1-215ENST00000532313 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
CSRP1-215ENST00000532313 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
CSRP1-215ENST00000532313 K7EIL1 84 aa8.3□□□□□ -1.08
CSRP1-215ENST00000532313 LINC01556Q5JQF7 62 aa8.3□□□□□ -1.08
CSRP1-215ENST00000532313 TSHBP01222 138 aa8.3□□□□□ -1.08
CSRP1-215ENST00000532313 CEND1Q8N111 149 aa8.3□□□□□ -1.08
CSRP1-215ENST00000532313 C11orf21Q9P2W6 132 aa8.3□□□□□ -1.08
CSRP1-215ENST00000532313 USP17L23D6RBM5 183 aa8.29□□□□□ -1.08
CSRP1-215ENST00000532313 M0R378 163 aa8.29□□□□□ -1.08
CSRP1-215ENST00000532313 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
CSRP1-215ENST00000532313 CFC1P0CG37 223 aa8.29□□□□□ -1.08
CSRP1-215ENST00000532313 Q8IZM0 81 aa8.29□□□□□ -1.08
CSRP1-215ENST00000532313 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
CSRP1-215ENST00000532313 A0A0J9YXY3 114 aa8.29□□□□□ -1.08
CSRP1-215ENST00000532313 C2orf48Q96LS8 159 aa8.29□□□□□ -1.08
CSRP1-215ENST00000532313 CDKN2A-AS1Q9UH64 79 aa8.29□□□□□ -1.08
CSRP1-215ENST00000532313 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
CSRP1-215ENST00000532313 PDE6GP18545 87 aa8.28□□□□□ -1.08
CSRP1-215ENST00000532313 UBE2D4Q9Y2X8 147 aa8.28□□□□□ -1.08
CSRP1-215ENST00000532313 CENPFP49454 3210 aa8.28□□□□□ -1.08
CSRP1-215ENST00000532313 SETD2Q9BYW2 2564 aaPredicted RBP8.28□□□□□ -1.08
CSRP1-215ENST00000532313 C9JAW5 83 aa8.28□□□□□ -1.08
CSRP1-215ENST00000532313 COA6Q5JTJ3 125 aaKnown RBP8.28□□□□□ -1.08
CSRP1-215ENST00000532313 CDC42SE2Q9NRR3 84 aa8.28□□□□□ -1.08
CSRP1-215ENST00000532313 DHRS4-AS1Q9P1J3 65 aa8.27□□□□□ -1.08
CSRP1-215ENST00000532313 GAGE2AQ6NT46 116 aa8.27□□□□□ -1.09
CSRP1-215ENST00000532313 LINC01561Q8N1V8 128 aa8.27□□□□□ -1.09
CSRP1-215ENST00000532313 TRACP01848 142 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms