RNA–Protein interactions for RNA: ENST00000531920.6

MED17-208, Transcript of mediator complex subunit 17, human

TSL 3

Gene MED17, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-208	ENST00000531920	APOC3	P02656	99 aa		0.86	□□□□□ -2.27
MED17-208	ENST00000531920	FAM167A-AS1	Q96KT0	104 aa		0.86	□□□□□ -2.27
MED17-208	ENST00000531920	CDC42SE2	Q9NRR3	84 aa		0.86	□□□□□ -2.27
MED17-208	ENST00000531920	LINC01558	Q9Y6Z2	57 aa		0.86	□□□□□ -2.27
MED17-208	ENST00000531920	NAV3	Q8IVL0	2385 aa		0.86	□□□□□ -2.27
MED17-208	ENST00000531920	ARHGEF5	Q12774	1597 aa		0.86	□□□□□ -2.27
MED17-208	ENST00000531920	TOPAZ1	Q8N9V7	1692 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	hADV29S1	A0JD25	119 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	ZNF815P	A8K554	130 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	CHD1	O14646	1710 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	PIN1P1	O15428	100 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	SFT2D2	O95562	160 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	HAMP	P81172	84 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	COX6A2	Q02221	97 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	COX17	Q14061	63 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	TOP2B	Q02880	1626 aa		0.85	□□□□□ -2.27
MED17-208	ENST00000531920	KRTAP5-10	Q6L8G5	202 aa		0.84	□□□□□ -2.27
MED17-208	ENST00000531920	SHANK2	Q9UPX8	1470 aa		0.84	□□□□□ -2.28
MED17-208	ENST00000531920	SBF2	Q86WG5	1849 aa		0.84	□□□□□ -2.28
MED17-208	ENST00000531920	LRRC37A2	A6NM11	1700 aa		0.84	□□□□□ -2.28
MED17-208	ENST00000531920	ABCC5	O15440	1437 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	BTAF1	O14981	1849 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	WNK3	Q9BYP7	1800 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	CAD	P27708	2225 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	UBE2D3	P61077	147 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	UBE2D2	P62837	147 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	NCMAP	Q5T1S8	102 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	ACBD7	Q8N6N7	88 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	PRO1854	Q9UHT4	67 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	ARL2-SNX15	V9GYD0	113 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	KCP	Q6ZWJ8	1503 aa		0.83	□□□□□ -2.28
MED17-208	ENST00000531920	FRAS1	Q86XX4	4008 aa		0.82	□□□□□ -2.28
MED17-208	ENST00000531920	GNGT2	O14610	69 aa		0.82	□□□□□ -2.28
MED17-208	ENST00000531920	TRAPPC2	P0DI81	140 aa		0.82	□□□□□ -2.28
MED17-208	ENST00000531920	TRAPPC2B	P0DI82	140 aa		0.82	□□□□□ -2.28
MED17-208	ENST00000531920	KRTDAP	P60985	99 aa		0.82	□□□□□ -2.28
MED17-208	ENST00000531920	FAM223A	Q8IWN6	122 aa		0.82	□□□□□ -2.28
MED17-208	ENST00000531920	LINC00472	Q9H8W2	130 aa		0.82	□□□□□ -2.28
MED17-208	ENST00000531920	NXT2	Q9NPJ8	142 aa	Known RBP	0.82	□□□□□ -2.28
MED17-208	ENST00000531920	KDM3B	Q7LBC6	1761 aa		0.82	□□□□□ -2.28
MED17-208	ENST00000531920	PLXNB2	O15031	1838 aa		0.82	□□□□□ -2.28
MED17-208	ENST00000531920	PRH1	P02810	166 aa		0.81	□□□□□ -2.28
MED17-208	ENST00000531920	IGLC1	P0CG04	106 aa		0.81	□□□□□ -2.28
MED17-208	ENST00000531920	SEC11A	P67812	179 aa		0.81	□□□□□ -2.28
MED17-208	ENST00000531920	FAIM	Q9NVQ4	179 aa		0.81	□□□□□ -2.28
MED17-208	ENST00000531920	HMGXB3	Q12766	1538 aa		0.8	□□□□□ -2.28
MED17-208	ENST00000531920		M0R3E3	92 aa		0.8	□□□□□ -2.28
MED17-208	ENST00000531920	MPC2	O95563	127 aa		0.8	□□□□□ -2.28
MED17-208	ENST00000531920	COX6C	P09669	75 aa		0.8	□□□□□ -2.28
MED17-208	ENST00000531920	SCN7A	Q01118	1682 aa		0.8	□□□□□ -2.28
MED17-208	ENST00000531920	MRC2	Q9UBG0	1479 aa		0.8	□□□□□ -2.28
MED17-208	ENST00000531920	EHBP1L1	Q8N3D4	1523 aa		0.79	□□□□□ -2.28
MED17-208	ENST00000531920	LRP6	O75581	1613 aa		0.79	□□□□□ -2.28
MED17-208	ENST00000531920		M0R143	59 aa		0.79	□□□□□ -2.28
MED17-208	ENST00000531920	MT-ATP8	P03928	68 aa		0.79	□□□□□ -2.28
MED17-208	ENST00000531920		Q6JHZ5	121 aa		0.79	□□□□□ -2.28
MED17-208	ENST00000531920	MGP	P08493	103 aa		0.78	□□□□□ -2.28
MED17-208	ENST00000531920	KRTAP2-3	P0C7H8	128 aa		0.78	□□□□□ -2.28
MED17-208	ENST00000531920	KRTAP2-4	Q9BYR9	128 aa		0.78	□□□□□ -2.28
MED17-208	ENST00000531920	KRTAP2-1	Q9BYU5	128 aa		0.78	□□□□□ -2.28
MED17-208	ENST00000531920	AP4S1	Q9Y587	144 aa		0.78	□□□□□ -2.28
MED17-208	ENST00000531920	AHNAK	Q09666	5890 aa	Known RBP	0.77	□□□□□ -2.29
MED17-208	ENST00000531920	S100A8	P05109	93 aa		0.77	□□□□□ -2.29
MED17-208	ENST00000531920	SPINK6	Q6UWN8	80 aa		0.77	□□□□□ -2.29
MED17-208	ENST00000531920	SMR3A	Q99954	134 aa		0.77	□□□□□ -2.29
MED17-208	ENST00000531920	PMCHL2	Q9BQD1	86 aa		0.77	□□□□□ -2.29
MED17-208	ENST00000531920	ERCC6L2	Q5T890	1561 aa		0.77	□□□□□ -2.29
MED17-208	ENST00000531920	RAPGEF6	Q8TEU7	1601 aa		0.76	□□□□□ -2.29
MED17-208	ENST00000531920	DIP2C	Q9Y2E4	1556 aa		0.76	□□□□□ -2.29
MED17-208	ENST00000531920	FAM223B	A6NKX1	122 aa		0.76	□□□□□ -2.29
MED17-208	ENST00000531920	C10orf142	B7Z368	130 aa		0.76	□□□□□ -2.29
MED17-208	ENST00000531920	BCE1	O60756	84 aa		0.76	□□□□□ -2.29
MED17-208	ENST00000531920	VPS8	Q8N3P4	1428 aa		0.75	□□□□□ -2.29
MED17-208	ENST00000531920	ASXL3	Q9C0F0	2248 aa		0.75	□□□□□ -2.29
MED17-208	ENST00000531920		A0A0D9SFI3	127 aa		0.75	□□□□□ -2.29
MED17-208	ENST00000531920	UBA52	P62987	128 aa	Known RBP	0.75	□□□□□ -2.29
MED17-208	ENST00000531920	AKAP12	Q02952	1782 aa		0.75	□□□□□ -2.29
MED17-208	ENST00000531920	CACNA1H	O95180	2353 aa		0.75	□□□□□ -2.29
MED17-208	ENST00000531920	ABCC10	Q5T3U5	1492 aa		0.74	□□□□□ -2.29
MED17-208	ENST00000531920	S100A3	P33764	101 aa		0.74	□□□□□ -2.29
MED17-208	ENST00000531920	PRO0255	Q9UI72	69 aa		0.74	□□□□□ -2.29
MED17-208	ENST00000531920	LAMC1	P11047	1609 aa		0.74	□□□□□ -2.29
MED17-208	ENST00000531920	TTC28	Q96AY4	2481 aa		0.74	□□□□□ -2.29
MED17-208	ENST00000531920	APC	P25054	2843 aa		0.74	□□□□□ -2.29
MED17-208	ENST00000531920	FYCO1	Q9BQS8	1478 aa		0.73	□□□□□ -2.29
MED17-208	ENST00000531920	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.73	□□□□□ -2.29
MED17-208	ENST00000531920		A0A0G2JND7	137 aa		0.73	□□□□□ -2.29
MED17-208	ENST00000531920		A0A1B0GWA3	101 aa		0.73	□□□□□ -2.29
MED17-208	ENST00000531920	SPRR4	Q96PI1	79 aa		0.73	□□□□□ -2.29
MED17-208	ENST00000531920	CNFN	Q9BYD5	112 aa		0.73	□□□□□ -2.29
MED17-208	ENST00000531920	DPY30	Q9C005	99 aa		0.73	□□□□□ -2.29
MED17-208	ENST00000531920	ANKRD36B	Q8N2N9	1353 aa		0.72	□□□□□ -2.29
MED17-208	ENST00000531920	CCNB3	Q8WWL7	1395 aa		0.72	□□□□□ -2.29
MED17-208	ENST00000531920	COL4A6	Q14031	1691 aa		0.72	□□□□□ -2.29
MED17-208	ENST00000531920	TNC	P24821	2201 aa		0.72	□□□□□ -2.29
MED17-208	ENST00000531920	LINC00032	P0C843	101 aa		0.72	□□□□□ -2.29
MED17-208	ENST00000531920	ADGRL2	O95490	1459 aa		0.72	□□□□□ -2.29
MED17-208	ENST00000531920	GAPVD1	Q14C86	1478 aa		0.72	□□□□□ -2.29
MED17-208	ENST00000531920	NSD3	Q9BZ95	1437 aa		0.72	□□□□□ -2.29
MED17-208	ENST00000531920	MUC16	Q8WXI7	14507 aa		0.71	□□□□□ -2.3

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms