RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ZC2HC1BQ5TFG8 222 aa12.94□□□□□ -0.34
SMPD1-205ENST00000531303 KLK12Q9UKR0 248 aa12.94□□□□□ -0.34
SMPD1-205ENST00000531303 PYGO1Q9Y3Y4 419 aa12.94□□□□□ -0.34
SMPD1-205ENST00000531303 IGLV4-3A0A075B6K6 122 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 IGKV3OR2-268A0A0C4DH90 116 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 A0A1B0GUV1 79 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 LINC01549A6NIU2 74 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.93□□□□□ -0.34
SMPD1-205ENST00000531303 ATP5LO75964 103 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 DNAH10OSP0CZ25 163 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 LINC01556Q5JQF7 62 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 LGALS9CQ6DKI2 356 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 CLPSL2Q6UWE3 100 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 ZNF664Q8N3J9 261 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 FAM104AQ969W3 186 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 TMEM141Q96I45 108 aa12.93□□□□□ -0.34
SMPD1-205ENST00000531303 IFI27L1Q96BM0 104 aa12.92□□□□□ -0.34
SMPD1-205ENST00000531303 TIMM17AQ99595 171 aa12.92□□□□□ -0.34
SMPD1-205ENST00000531303 CDC42SE2Q9NRR3 84 aa12.92□□□□□ -0.34
SMPD1-205ENST00000531303 HSPB8Q9UJY1 196 aa12.92□□□□□ -0.34
SMPD1-205ENST00000531303 CSDC2Q9Y534 153 aaKnown RBP12.92□□□□□ -0.34
SMPD1-205ENST00000531303 IFITM10A6NMD0 228 aa12.91□□□□□ -0.34
SMPD1-205ENST00000531303 H0Y8G0 127 aa12.91□□□□□ -0.34
SMPD1-205ENST00000531303 Q6ZN92 141 aa12.91□□□□□ -0.34
SMPD1-205ENST00000531303 LINC00269Q8N2A0 174 aa12.91□□□□□ -0.34
SMPD1-205ENST00000531303 HIST1H2BLQ99880 126 aa12.91□□□□□ -0.34
SMPD1-205ENST00000531303 PRSS1P07477 247 aa12.91□□□□□ -0.34
SMPD1-205ENST00000531303 LINC00476Q8WZB0 136 aa12.91□□□□□ -0.34
SMPD1-205ENST00000531303 VCX2Q9H322 139 aa12.91□□□□□ -0.34
SMPD1-205ENST00000531303 LYSTQ99698 3801 aa12.9□□□□□ -0.34
SMPD1-205ENST00000531303 MRPS36P82909 103 aaKnown RBP12.9□□□□□ -0.34
SMPD1-205ENST00000531303 BAALCQ8WXS3 180 aa12.9□□□□□ -0.34
SMPD1-205ENST00000531303 UBE2WQ96B02 151 aa12.89□□□□□ -0.35
SMPD1-205ENST00000531303 VPS13DQ5THJ4 4388 aa12.89□□□□□ -0.35
SMPD1-205ENST00000531303 TEX43Q6ZNM6 134 aa12.88□□□□□ -0.35
SMPD1-205ENST00000531303 TRAV9-2A0A087WT02 112 aa12.87□□□□□ -0.35
SMPD1-205ENST00000531303 KRTDAPP60985 99 aa12.87□□□□□ -0.35
SMPD1-205ENST00000531303 PAPPA-AS1Q5QFB9 102 aa12.87□□□□□ -0.35
SMPD1-205ENST00000531303 MAP1LC3CQ9BXW4 147 aa12.87□□□□□ -0.35
SMPD1-205ENST00000531303 TRAV13-1A0A0B4J241 112 aa12.86□□□□□ -0.35
SMPD1-205ENST00000531303 M0R2N4 97 aa12.86□□□□□ -0.35
SMPD1-205ENST00000531303 NPSP0C0P6 89 aa12.86□□□□□ -0.35
SMPD1-205ENST00000531303 REG3AQ06141 175 aa12.86□□□□□ -0.35
SMPD1-205ENST00000531303 PACRGQ96M98 296 aaPredicted RBP12.86□□□□□ -0.35
SMPD1-205ENST00000531303 PRSS29PA6NIE9 313 aa12.85□□□□□ -0.35
SMPD1-205ENST00000531303 CRPP02741 224 aa12.85□□□□□ -0.35
SMPD1-205ENST00000531303 PMVKQ15126 192 aa12.85□□□□□ -0.35
SMPD1-205ENST00000531303 AMELXQ99217 191 aa12.85□□□□□ -0.35
SMPD1-205ENST00000531303 C2orf88Q9BSF0 95 aa12.85□□□□□ -0.35
SMPD1-205ENST00000531303 CST9LQ9H4G1 147 aa12.85□□□□□ -0.35
SMPD1-205ENST00000531303 ENHOQ6UWT2 76 aa12.85□□□□□ -0.35
SMPD1-205ENST00000531303 KRTAP1-5Q9BYS1 174 aa12.85□□□□□ -0.35
SMPD1-205ENST00000531303 Q9HAA7 133 aa12.85□□□□□ -0.35
SMPD1-205ENST00000531303 NBDYA0A0U1RRE5 68 aa12.84□□□□□ -0.35
SMPD1-205ENST00000531303 C3orf79P0CE67 100 aa12.84□□□□□ -0.35
SMPD1-205ENST00000531303 C10orf126Q8N4M7 172 aa12.84□□□□□ -0.35
SMPD1-205ENST00000531303 DNAH1Q9P2D7 4330 aa12.83□□□□□ -0.36
SMPD1-205ENST00000531303 IGLV10-54A0A075B6I4 117 aa12.83□□□□□ -0.36
SMPD1-205ENST00000531303 OR10D4PQ8NGN7 298 aa12.83□□□□□ -0.36
SMPD1-205ENST00000531303 PRR34Q9NV39 138 aa12.83□□□□□ -0.36
SMPD1-205ENST00000531303 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
SMPD1-205ENST00000531303 LINC00959A0A1B0GUT2 108 aa12.82□□□□□ -0.36
SMPD1-205ENST00000531303 IBA57-AS1B1ANH7 110 aa12.82□□□□□ -0.36
SMPD1-205ENST00000531303 SYS1-DBNDD2H3BUS1 97 aa12.82□□□□□ -0.36
SMPD1-205ENST00000531303 SPATA12Q7Z6I5 190 aa12.81□□□□□ -0.36
SMPD1-205ENST00000531303 PMCHL2Q9BQD1 86 aa12.81□□□□□ -0.36
SMPD1-205ENST00000531303 UBE2D1P51668 147 aa12.8□□□□□ -0.36
SMPD1-205ENST00000531303 SS18Q15532 418 aa12.8□□□□□ -0.36
SMPD1-205ENST00000531303 TTC32Q5I0X7 151 aa12.8□□□□□ -0.36
SMPD1-205ENST00000531303 CHTOPQ9Y3Y2 248 aaKnown RBP12.8□□□□□ -0.36
SMPD1-205ENST00000531303 TRAV12-1A0A0B4J245 112 aa12.79□□□□□ -0.36
SMPD1-205ENST00000531303 A0A0J9YXV3 536 aa12.79□□□□□ -0.36
SMPD1-205ENST00000531303 K7EP13 123 aa12.78□□□□□ -0.36
SMPD1-205ENST00000531303 XCL1P47992 114 aa12.78□□□□□ -0.36
SMPD1-205ENST00000531303 MRPL35Q9NZE8 188 aaKnown RBP12.78□□□□□ -0.36
SMPD1-205ENST00000531303 IGKV2D-24A0A075B6R9 120 aa12.78□□□□□ -0.36
SMPD1-205ENST00000531303 TRAV8-3A0A0A6YYJ7 113 aa12.78□□□□□ -0.36
SMPD1-205ENST00000531303 CCL25O15444 150 aa12.78□□□□□ -0.36
SMPD1-205ENST00000531303 ODF1Q14990 250 aa12.78□□□□□ -0.36
SMPD1-205ENST00000531303 MIAQ16674 131 aa12.78□□□□□ -0.36
SMPD1-205ENST00000531303 PET117Q6UWS5 81 aa12.78□□□□□ -0.36
SMPD1-205ENST00000531303 CHCHD10Q8WYQ3 142 aaPredicted RBP12.78□□□□□ -0.36
SMPD1-205ENST00000531303 LINC00242Q5T6M2 205 aa12.77□□□□□ -0.37
SMPD1-205ENST00000531303 LCE6AA0A183 80 aa12.76□□□□□ -0.37
SMPD1-205ENST00000531303 AKR1D1P51857 326 aa12.76□□□□□ -0.37
SMPD1-205ENST00000531303 COX6A2Q02221 97 aa12.76□□□□□ -0.37
SMPD1-205ENST00000531303 C1orf43Q9BWL3 253 aa12.76□□□□□ -0.37
SMPD1-205ENST00000531303 GEMIN7Q9H840 131 aaKnown RBP12.76□□□□□ -0.37
SMPD1-205ENST00000531303 IGLV4-69A0A075B6H9 119 aa12.75□□□□□ -0.37
SMPD1-205ENST00000531303 TRAV8-4A0A0B4J246 113 aa12.75□□□□□ -0.37
SMPD1-205ENST00000531303 GAGE12HA6NDE8 117 aa12.75□□□□□ -0.37
SMPD1-205ENST00000531303 F8VRH5 84 aa12.74□□□□□ -0.37
SMPD1-205ENST00000531303 Q6ZR54 194 aa12.74□□□□□ -0.37
SMPD1-205ENST00000531303 C11orf86A6NJI1 115 aa12.73□□□□□ -0.37
SMPD1-205ENST00000531303 SCGB1D1O95968 90 aa12.73□□□□□ -0.37
SMPD1-205ENST00000531303 LINC01545Q5VT33 79 aa12.73□□□□□ -0.37
SMPD1-205ENST00000531303 CHAC1Q9BUX1 264 aa12.73□□□□□ -0.37
SMPD1-205ENST00000531303 TINCRA0A1B0GVN0 87 aa12.72□□□□□ -0.37
SMPD1-205ENST00000531303 C20orf202A1L168 122 aa12.72□□□□□ -0.37
SMPD1-205ENST00000531303 IGLC3P0DOY3 106 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 310 ms