RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 C18orf32Q8TCD1 76 aa7.3□□□□□ -1.24
CAPN1-218ENST00000530442 LRCOL1A6NCL2 159 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 LINC01546A6NGU7 62 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 K7EMI3 77 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 PSCAO43653 123 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 ORMDL2Q53FV1 153 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 KRTAP26-1Q6PEX3 210 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 MAPKAPK5-AS1Q8N8E1 139 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 FAM104AQ969W3 186 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 TMEM18Q96B42 140 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 RMI2Q96E14 147 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 TMEM101Q96IK0 257 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 TIMM21Q9BVV7 248 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 C1orf43Q9BWL3 253 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 TM2D2Q9BX73 214 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 CDC42SE2Q9NRR3 84 aa7.29□□□□□ -1.24
CAPN1-218ENST00000530442 CSDC2Q9Y534 153 aaKnown RBP7.29□□□□□ -1.24
CAPN1-218ENST00000530442 IGLV10-54A0A075B6I4 117 aa7.28□□□□□ -1.24
CAPN1-218ENST00000530442 A0A087WTM6 91 aa7.28□□□□□ -1.24
CAPN1-218ENST00000530442 IGKV3OR2-268A0A0C4DH90 116 aa7.28□□□□□ -1.24
CAPN1-218ENST00000530442 WFDC2Q14508 124 aa7.28□□□□□ -1.24
CAPN1-218ENST00000530442 RNASE13Q5GAN3 156 aaKnown RBP7.28□□□□□ -1.24
CAPN1-218ENST00000530442 C2orf66Q6UXQ4 117 aa7.28□□□□□ -1.24
CAPN1-218ENST00000530442 PRSS3P2Q8NHM4 247 aa7.28□□□□□ -1.24
CAPN1-218ENST00000530442 URB1-AS1Q96HZ7 61 aa7.28□□□□□ -1.24
CAPN1-218ENST00000530442 SPANXA1Q9NS26 97 aa7.28□□□□□ -1.24
CAPN1-218ENST00000530442 TRGC2P03986 189 aa7.27□□□□□ -1.25
CAPN1-218ENST00000530442 S100A1P23297 94 aa7.27□□□□□ -1.25
CAPN1-218ENST00000530442 SMAGPQ0VAQ4 97 aa7.27□□□□□ -1.25
CAPN1-218ENST00000530442 DGAT2L7PQ6IED9 249 aa7.27□□□□□ -1.25
CAPN1-218ENST00000530442 ZNF664Q8N3J9 261 aa7.27□□□□□ -1.25
CAPN1-218ENST00000530442 CYSLTR1Q9Y271 337 aa7.27□□□□□ -1.25
CAPN1-218ENST00000530442 COX11Q9Y6N1 276 aa7.27□□□□□ -1.25
CAPN1-218ENST00000530442 TRAV8-4A0A0B4J246 113 aa7.26□□□□□ -1.25
CAPN1-218ENST00000530442 FA2HQ7L5A8 372 aa7.26□□□□□ -1.25
CAPN1-218ENST00000530442 OPRPNQ99935 248 aaPredicted RBP7.26□□□□□ -1.25
CAPN1-218ENST00000530442 PYGO1Q9Y3Y4 419 aa7.26□□□□□ -1.25
CAPN1-218ENST00000530442 DNAH8Q96JB1 4490 aa7.25□□□□□ -1.25
CAPN1-218ENST00000530442 IGLV4-3A0A075B6K6 122 aa7.25□□□□□ -1.25
CAPN1-218ENST00000530442 LINC00959A0A1B0GUT2 108 aa7.25□□□□□ -1.25
CAPN1-218ENST00000530442 LECT2O14960 151 aa7.25□□□□□ -1.25
CAPN1-218ENST00000530442 MRPS36P82909 103 aaKnown RBP7.25□□□□□ -1.25
CAPN1-218ENST00000530442 BAALCQ8WXS3 180 aa7.25□□□□□ -1.25
CAPN1-218ENST00000530442 APOBP04114 4563 aaKnown RBP7.24□□□□□ -1.25
CAPN1-218ENST00000530442 A0A096LNJ9 63 aa7.24□□□□□ -1.25
CAPN1-218ENST00000530442 IGIPA6NJ69 53 aa7.24□□□□□ -1.25
CAPN1-218ENST00000530442 KRTAP10-2P60368 255 aa7.24□□□□□ -1.25
CAPN1-218ENST00000530442 SPATA12Q7Z6I5 190 aa7.24□□□□□ -1.25
CAPN1-218ENST00000530442 CHCHD10Q8WYQ3 142 aaPredicted RBP7.24□□□□□ -1.25
CAPN1-218ENST00000530442 TOMM6Q96B49 74 aa7.24□□□□□ -1.25
CAPN1-218ENST00000530442 AP5S1Q9NUS5 200 aa7.24□□□□□ -1.25
CAPN1-218ENST00000530442 GAGE12HA6NDE8 117 aa7.23□□□□□ -1.25
CAPN1-218ENST00000530442 CCL25O15444 150 aa7.23□□□□□ -1.25
CAPN1-218ENST00000530442 LINC00614P0C842 121 aa7.23□□□□□ -1.25
CAPN1-218ENST00000530442 Q8N814 137 aa7.23□□□□□ -1.25
CAPN1-218ENST00000530442 TMEM141Q96I45 108 aa7.23□□□□□ -1.25
CAPN1-218ENST00000530442 TIMM17AQ99595 171 aa7.23□□□□□ -1.25
CAPN1-218ENST00000530442 TRAV13-1A0A0B4J241 112 aa7.22□□□□□ -1.25
CAPN1-218ENST00000530442 EREGO14944 169 aa7.22□□□□□ -1.25
CAPN1-218ENST00000530442 FUSP35637 526 aaKnown RBP eCLIP7.22□□□□□ -1.25
CAPN1-218ENST00000530442 XCL1P47992 114 aa7.22□□□□□ -1.25
CAPN1-218ENST00000530442 FOXI1Q12951 378 aa7.22□□□□□ -1.25
CAPN1-218ENST00000530442 LINC00173Q6ZV60 143 aa7.22□□□□□ -1.25
CAPN1-218ENST00000530442 IFITM10A6NMD0 228 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 USP17L23D6RBM5 183 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 NPSP0C0P6 89 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 G0S2P27469 103 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 LINC00310P59036 64 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 RAB5BP61020 215 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 SS18Q15532 418 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 PMCHL1Q16048 86 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 ZC2HC1BQ5TFG8 222 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 AMELXQ99217 191 aa7.21□□□□□ -1.26
CAPN1-218ENST00000530442 C1orf196B1AJZ1 125 aa7.2□□□□□ -1.26
CAPN1-218ENST00000530442 HBDP02042 147 aa7.2□□□□□ -1.26
CAPN1-218ENST00000530442 CD164L2Q6UWJ8 174 aa7.2□□□□□ -1.26
CAPN1-218ENST00000530442 Q6ZN92 141 aa7.2□□□□□ -1.26
CAPN1-218ENST00000530442 TEX43Q6ZNM6 134 aa7.2□□□□□ -1.26
CAPN1-218ENST00000530442 ERASQ7Z444 233 aa7.2□□□□□ -1.26
CAPN1-218ENST00000530442 C15orf56Q8N910 161 aa7.2□□□□□ -1.26
CAPN1-218ENST00000530442 CHCHD1Q96BP2 118 aaKnown RBP7.2□□□□□ -1.26
CAPN1-218ENST00000530442 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
CAPN1-218ENST00000530442 RYR1P21817 5038 aa7.2□□□□□ -1.26
CAPN1-218ENST00000530442 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.19□□□□□ -1.26
CAPN1-218ENST00000530442 LINC01549A6NIU2 74 aa7.19□□□□□ -1.26
CAPN1-218ENST00000530442 BAGE3Q86Y29 109 aa7.19□□□□□ -1.26
CAPN1-218ENST00000530442 KIAA1109Q2LD37 5005 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 C16orf90A8MZG2 172 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST1H2BKO60814 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 SERF1AO75920 110 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST1H2BJP06899 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST1H2BOP23527 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST1H2BBP33778 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 UBE2D1P51668 147 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST1H2BDP58876 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST1H2BCP62807 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST2H2BEQ16778 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 C14orf177Q52M58 125 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 PDZD11Q5EBL8 140 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms