RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 MANBALQ9NQG1 85 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 CDC42SE2Q9NRR3 84 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 ZDBF2Q9HCK1 2354 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 A0A1W2PPM0 123 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 CHKB-CPT1BH3BT56 60 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 ANGP03950 147 aaKnown RBP1.44□□□□□ -2.18
C11orf88-204ENST00000529661 COX6CP09669 75 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 LYNX1P0DP58 116 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 SPAG11BQ08648 103 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 SPAG11AQ6PDA7 123 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 Q8N6K4 173 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 AMELXQ99217 191 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 R4GMQ9 66 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 BTAF1O14981 1849 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 KIF21AQ7Z4S6 1674 aa1.44□□□□□ -2.18
C11orf88-204ENST00000529661 EPRSP07814 1512 aaKnown RBP1.44□□□□□ -2.18
C11orf88-204ENST00000529661 RP1L1Q8IWN7 2480 aaPredicted RBP1.44□□□□□ -2.18
C11orf88-204ENST00000529661 FANCAO15360 1455 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 HELZ2Q9BYK8 2649 aaKnown RBP1.43□□□□□ -2.18
C11orf88-204ENST00000529661 F5P12259 2224 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 CEP162Q5TB80 1403 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 HMGN4O00479 90 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 Q96NJ1 140 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 PRO1933Q9H354 126 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 CACFD1Q9UGQ2 172 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 V9GYH0 126 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 EHBP1L1Q8N3D4 1523 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 UBR1Q8IWV7 1749 aa1.43□□□□□ -2.18
C11orf88-204ENST00000529661 SCN7AQ01118 1682 aa1.42□□□□□ -2.18
C11orf88-204ENST00000529661 HMGXB3Q12766 1538 aa1.42□□□□□ -2.18
C11orf88-204ENST00000529661 CNTRLQ7Z7A1 2325 aa1.42□□□□□ -2.18
C11orf88-204ENST00000529661 MYO3AQ8NEV4 1616 aa1.42□□□□□ -2.18
C11orf88-204ENST00000529661 ARL14EPLP0DKL9 152 aa1.42□□□□□ -2.18
C11orf88-204ENST00000529661 VMO1Q7Z5L0 202 aa1.42□□□□□ -2.18
C11orf88-204ENST00000529661 SUPT6HQ7KZ85 1726 aaKnown RBP1.42□□□□□ -2.18
C11orf88-204ENST00000529661 ZNF236Q9UL36 1845 aa1.42□□□□□ -2.18
C11orf88-204ENST00000529661 UNC13BO14795 1591 aa1.42□□□□□ -2.18
C11orf88-204ENST00000529661 KNTC1P50748 2209 aa1.42□□□□□ -2.18
C11orf88-204ENST00000529661 NUP188Q5SRE5 1749 aa1.41□□□□□ -2.18
C11orf88-204ENST00000529661 LAMA4Q16363 1823 aa1.41□□□□□ -2.18
C11orf88-204ENST00000529661 A0A096LNT2 108 aa1.41□□□□□ -2.18
C11orf88-204ENST00000529661 TMEM14DPA8MWL7 114 aa1.41□□□□□ -2.18
C11orf88-204ENST00000529661 H7BZZ5 65 aa1.41□□□□□ -2.18
C11orf88-204ENST00000529661 APOC3P02656 99 aa1.41□□□□□ -2.18
C11orf88-204ENST00000529661 SPINK13Q1W4C9 94 aa1.41□□□□□ -2.18
C11orf88-204ENST00000529661 BAGE3Q86Y29 109 aa1.41□□□□□ -2.18
C11orf88-204ENST00000529661 UNC79Q9P2D8 2635 aa1.4□□□□□ -2.18
C11orf88-204ENST00000529661 SYS1-DBNDD2H3BUS1 97 aa1.4□□□□□ -2.19
C11orf88-204ENST00000529661 K7EP34 96 aa1.4□□□□□ -2.19
C11orf88-204ENST00000529661 FAUP35544 74 aaKnown RBP1.4□□□□□ -2.19
C11orf88-204ENST00000529661 TMEM170BQ5T4T1 132 aa1.4□□□□□ -2.19
C11orf88-204ENST00000529661 CACNA1CQ13936 2221 aa1.4□□□□□ -2.19
C11orf88-204ENST00000529661 MAP3K4Q9Y6R4 1608 aa1.4□□□□□ -2.19
C11orf88-204ENST00000529661 UACAQ9BZF9 1416 aa1.4□□□□□ -2.19
C11orf88-204ENST00000529661 ATP10BO94823 1461 aa1.39□□□□□ -2.19
C11orf88-204ENST00000529661 MAGI2Q86UL8 1455 aa1.39□□□□□ -2.19
C11orf88-204ENST00000529661 IGLC7A0M8Q6 106 aa1.39□□□□□ -2.19
C11orf88-204ENST00000529661 TRAPPC2P0DI81 140 aa1.39□□□□□ -2.19
C11orf88-204ENST00000529661 TRAPPC2BP0DI82 140 aa1.39□□□□□ -2.19
C11orf88-204ENST00000529661 C20orf78Q9BR46 151 aa1.39□□□□□ -2.19
C11orf88-204ENST00000529661 BPESC1Q9GZL8 116 aa1.39□□□□□ -2.19
C11orf88-204ENST00000529661 MYO7AQ13402 2215 aa1.39□□□□□ -2.19
C11orf88-204ENST00000529661 KIF20BQ96Q89 1820 aa1.38□□□□□ -2.19
C11orf88-204ENST00000529661 IQSEC2Q5JU85 1478 aa1.38□□□□□ -2.19
C11orf88-204ENST00000529661 RAPGEF6Q8TEU7 1601 aa1.38□□□□□ -2.19
C11orf88-204ENST00000529661 TRGV1A0A0A0MS02 117 aa1.38□□□□□ -2.19
C11orf88-204ENST00000529661 F8VRH5 84 aa1.38□□□□□ -2.19
C11orf88-204ENST00000529661 M0R135 149 aa1.38□□□□□ -2.19
C11orf88-204ENST00000529661 PLAC4Q8WY50 150 aa1.38□□□□□ -2.19
C11orf88-204ENST00000529661 LINC01558Q9Y6Z2 57 aa1.38□□□□□ -2.19
C11orf88-204ENST00000529661 LRRC37A2A6NM11 1700 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 COL6A6A6NMZ7 2263 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 KIF14Q15058 1648 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 PLIN4Q96Q06 1357 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 CDK13Q14004 1512 aaKnown RBP1.37□□□□□ -2.19
C11orf88-204ENST00000529661 ZMYM4Q5VZL5 1548 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 TRBV25-1A0A075B6N4 114 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 UQCRHLA0A096LP55 91 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 A0A0G2JND7 137 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 UQCR11O14957 56 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 BCE1O60756 84 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 RPL37P61927 97 aaKnown RBP1.37□□□□□ -2.19
C11orf88-204ENST00000529661 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 BAGE2Q86Y30 109 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 NXT2Q9NPJ8 142 aaKnown RBP1.37□□□□□ -2.19
C11orf88-204ENST00000529661 RABAC1Q9UI14 185 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 PLXNB2O15031 1838 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 NLRP1Q9C000 1473 aa1.37□□□□□ -2.19
C11orf88-204ENST00000529661 TRAV1-2A0A0B4J238 106 aa1.36□□□□□ -2.19
C11orf88-204ENST00000529661 CYB5AP00167 134 aa1.36□□□□□ -2.19
C11orf88-204ENST00000529661 UQCRHP07919 91 aa1.36□□□□□ -2.19
C11orf88-204ENST00000529661 SAA2P0DJI9 122 aaPredicted RBP1.36□□□□□ -2.19
C11orf88-204ENST00000529661 ACYP2P14621 99 aa1.36□□□□□ -2.19
C11orf88-204ENST00000529661 KRTAP10-4P60372 401 aaPredicted RBP1.36□□□□□ -2.19
C11orf88-204ENST00000529661 PMCHL1Q16048 86 aa1.36□□□□□ -2.19
C11orf88-204ENST00000529661 POLA1P09884 1462 aaPredicted RBP1.36□□□□□ -2.19
C11orf88-204ENST00000529661 ROS1P08922 2347 aa1.35□□□□□ -2.19
C11orf88-204ENST00000529661 ABCC2Q92887 1545 aa1.35□□□□□ -2.19
C11orf88-204ENST00000529661 CTXND1A0A1B0GTU2 59 aa1.35□□□□□ -2.19
C11orf88-204ENST00000529661 C10orf142B7Z368 130 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms