RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 LINC01549A6NIU2 74 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 H7BZZ5 65 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 SH2D1AO60880 128 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 ERC2-IT1O76042 136 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 LTAP01374 205 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 RNASE4P34096 147 aaKnown RBP1.87□□□□□ -2.11
CTR9-204ENST00000529355 DYNLT1P63172 113 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 ZNF826PQ6ZT77 177 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 WFDC5Q8TCV5 224 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 RNASE6Q93091 150 aaKnown RBP1.87□□□□□ -2.11
CTR9-204ENST00000529355 CYP4F30PQ9H0H9 118 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 XAGE1AQ9HD64 81 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 TAC3Q9UHF0 121 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 V9GYV3 84 aa1.87□□□□□ -2.11
CTR9-204ENST00000529355 MUC4Q99102 2169 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 DSCAMO60469 2012 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 ARHGAP32A7KAX9 2087 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 IGLV10-54A0A075B6I4 117 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 TMSB15BA0A087X1C1 80 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 IGHV1-45A0A0A0MS14 117 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 TRBV30A0A0K0K1B3 111 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 A6NN06 94 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 IQCF6A8MYZ5 107 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 TRGV3P03979 118 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 FGF12P61328 243 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 RPL38P63173 70 aaKnown RBP1.86□□□□□ -2.11
CTR9-204ENST00000529355 SUPT4H1P63272 117 aaKnown RBP1.86□□□□□ -2.11
CTR9-204ENST00000529355 MIR17HGQ75NE6 70 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 CLEC2BQ92478 149 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 C11orf1Q9H5F2 150 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 PRO1854Q9UHT4 67 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 ZNF706Q9Y5V0 76 aaPredicted RBP1.86□□□□□ -2.11
CTR9-204ENST00000529355 HEATR5BQ9P2D3 2071 aa1.86□□□□□ -2.11
CTR9-204ENST00000529355 TEX49A0A1B0GTD5 131 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 H3BQ85 93 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 PLNP26678 52 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 FCER1GP30273 86 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 RPL27AP46776 148 aaKnown RBP1.85□□□□□ -2.11
CTR9-204ENST00000529355 FXYD7P58549 80 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 KISS1Q15726 138 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 C20orf197Q8N268 126 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 LINC00269Q8N2A0 174 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 CCL4L1Q8NHW4 92 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 TMEM141Q96I45 108 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 SCGB3A1Q96QR1 104 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 LINC00467Q9BRT7 94 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 PHLDA3Q9Y5J5 127 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 PI4KAP42356 2102 aa1.85□□□□□ -2.11
CTR9-204ENST00000529355 IGLV3-32A0A0A0MS00 114 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 TMEM30CPA0ZSE6 113 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 F8WEM9 126 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 PIN1P1O15428 100 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 MIFP14174 115 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 LYPD5Q6UWN5 251 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 PATE2Q6UY27 113 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 SOSTDC1Q6X4U4 206 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 ZNF818PQ6ZRF7 136 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 FAM223AQ8IWN6 122 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 FAM167A-AS1Q96KT0 104 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 NABP2Q9BQ15 211 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 LIMD2Q9BT23 127 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 CYSTM1Q9H1C7 97 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 LINC00474Q9P2X8 69 aa1.84□□□□□ -2.11
CTR9-204ENST00000529355 ARFGEF3Q5TH69 2177 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 CEP192Q8TEP8 1941 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 COL4A6Q14031 1691 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 FAM223BA6NKX1 122 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 ZNF815PA8K554 130 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 LEPROTO15243 131 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 GNRH2O43555 120 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 PPP1R17O96001 155 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 FREM3P0C091 2139 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 DYNAPQ8N1N2 210 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 Q8N6K4 173 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 WFDC6Q9BQY6 131 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 TMEM167BQ9NRX6 74 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 NDUFA12Q9UI09 145 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 UBE2D4Q9Y2X8 147 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 ICOSQ9Y6W8 199 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 MED12Q93074 2177 aa1.83□□□□□ -2.12
CTR9-204ENST00000529355 KIAA0100Q14667 2235 aaKnown RBP1.83□□□□□ -2.12
CTR9-204ENST00000529355 TRAV12-1A0A0B4J245 112 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 LINC01546A6NGU7 62 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 DNAL4O96015 105 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 IGHV3-33P01772 117 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 IGKV1-16P04430 117 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 ZNF22P17026 224 aaPredicted RBP1.82□□□□□ -2.12
CTR9-204ENST00000529355 NPPCP23582 126 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 EDDM3BP56851 147 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 BSPH1Q075Z2 132 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 CDC42SE1Q9NRR8 79 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 ZNF831Q5JPB2 1677 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 ZGRF1Q86YA3 2104 aa1.82□□□□□ -2.12
CTR9-204ENST00000529355 INTS1Q8N201 2190 aaKnown RBP1.82□□□□□ -2.12
CTR9-204ENST00000529355 hDV103S1A0JD37 113 aa1.81□□□□□ -2.12
CTR9-204ENST00000529355 HCG22E2RYF7 251 aa1.81□□□□□ -2.12
CTR9-204ENST00000529355 IGKV1D-33P01593 117 aa1.81□□□□□ -2.12
CTR9-204ENST00000529355 IGKV1-33P01594 117 aa1.81□□□□□ -2.12
CTR9-204ENST00000529355 C9orf116Q5BN46 136 aaPredicted RBP1.81□□□□□ -2.12
CTR9-204ENST00000529355 CASC2Q6XLA1 102 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms