RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 UBE2D1P51668 147 aa12.32□□□□□ -0.44
PCDHA6-202ENST00000527624 FAM104AQ969W3 186 aa12.32□□□□□ -0.44
PCDHA6-202ENST00000527624 OVOL2Q9BRP0 275 aa12.32□□□□□ -0.44
PCDHA6-202ENST00000527624 TMEM223A0PJW6 202 aa12.31□□□□□ -0.44
PCDHA6-202ENST00000527624 GAGE12JA6NER3 117 aa12.31□□□□□ -0.44
PCDHA6-202ENST00000527624 GAGE4Q13068 117 aa12.31□□□□□ -0.44
PCDHA6-202ENST00000527624 GAGE5Q13069 117 aa12.31□□□□□ -0.44
PCDHA6-202ENST00000527624 GAGE13Q4V321 117 aa12.31□□□□□ -0.44
PCDHA6-202ENST00000527624 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
PCDHA6-202ENST00000527624 NBEAL2Q6ZNJ1 2754 aa12.3□□□□□ -0.44
PCDHA6-202ENST00000527624 ZNF22P17026 224 aaPredicted RBP12.3□□□□□ -0.44
PCDHA6-202ENST00000527624 RPL36AP83881 106 aaKnown RBP12.3□□□□□ -0.44
PCDHA6-202ENST00000527624 RPL36ALQ969Q0 106 aaKnown RBP12.3□□□□□ -0.44
PCDHA6-202ENST00000527624 A0A0J9YXV3 536 aa12.3□□□□□ -0.44
PCDHA6-202ENST00000527624 G3V4G9 280 aa12.3□□□□□ -0.44
PCDHA6-202ENST00000527624 LGALS3P17931 250 aaKnown RBP12.3□□□□□ -0.44
PCDHA6-202ENST00000527624 UBE2D4Q9Y2X8 147 aa12.3□□□□□ -0.44
PCDHA6-202ENST00000527624 TRBV10-1A0A0K0K1A3 114 aa12.29□□□□□ -0.44
PCDHA6-202ENST00000527624 LEPROTO15243 131 aa12.29□□□□□ -0.44
PCDHA6-202ENST00000527624 PGPEP1Q9NXJ5 209 aa12.29□□□□□ -0.44
PCDHA6-202ENST00000527624 H3BMG7 143 aa12.29□□□□□ -0.44
PCDHA6-202ENST00000527624 LOC100131303A0A0U1RQF7 123 aa12.28□□□□□ -0.44
PCDHA6-202ENST00000527624 F8W1H4 67 aa12.28□□□□□ -0.44
PCDHA6-202ENST00000527624 IGHV3-30P01768 117 aa12.28□□□□□ -0.44
PCDHA6-202ENST00000527624 IGHV3-30-5P0DP03 117 aa12.28□□□□□ -0.44
PCDHA6-202ENST00000527624 CRYBA4P53673 196 aa12.28□□□□□ -0.44
PCDHA6-202ENST00000527624 TRGV4A0A0C4DH28 118 aa12.27□□□□□ -0.44
PCDHA6-202ENST00000527624 DEFB130BP0DP73 79 aa12.27□□□□□ -0.44
PCDHA6-202ENST00000527624 DEFB130AP0DP74 79 aa12.27□□□□□ -0.44
PCDHA6-202ENST00000527624 SPANXA1Q9NS26 97 aa12.27□□□□□ -0.44
PCDHA6-202ENST00000527624 X6R8D5 127 aa12.27□□□□□ -0.44
PCDHA6-202ENST00000527624 Q6ZUT4 128 aa12.27□□□□□ -0.45
PCDHA6-202ENST00000527624 UBE2D3P61077 147 aa12.26□□□□□ -0.45
PCDHA6-202ENST00000527624 UBE2D2P62837 147 aa12.26□□□□□ -0.45
PCDHA6-202ENST00000527624 WFDC9Q8NEX5 89 aa12.26□□□□□ -0.45
PCDHA6-202ENST00000527624 MRPS36P82909 103 aaKnown RBP12.26□□□□□ -0.45
PCDHA6-202ENST00000527624 DEFB135Q30KP9 77 aa12.26□□□□□ -0.45
PCDHA6-202ENST00000527624 KRTAP24-1Q3LI83 254 aa12.26□□□□□ -0.45
PCDHA6-202ENST00000527624 APOMO95445 188 aa12.25□□□□□ -0.45
PCDHA6-202ENST00000527624 NTM-AS1Q6ZSK4 140 aa12.25□□□□□ -0.45
PCDHA6-202ENST00000527624 DAZ4Q86SG3 579 aaKnown RBP12.25□□□□□ -0.45
PCDHA6-202ENST00000527624 DAZ3Q9NR90 486 aaKnown RBP12.25□□□□□ -0.45
PCDHA6-202ENST00000527624 IGHV3-64A0A075B6Q5 118 aa12.25□□□□□ -0.45
PCDHA6-202ENST00000527624 RPL24P83731 157 aaKnown RBP12.25□□□□□ -0.45
PCDHA6-202ENST00000527624 WFDC2Q14508 124 aa12.25□□□□□ -0.45
PCDHA6-202ENST00000527624 TSPAN13O95857 204 aa12.24□□□□□ -0.45
PCDHA6-202ENST00000527624 LINC00694P0DN24 101 aa12.24□□□□□ -0.45
PCDHA6-202ENST00000527624 FHL2Q14192 279 aa12.24□□□□□ -0.45
PCDHA6-202ENST00000527624 TEX48A0A1B0GUV7 120 aa12.23□□□□□ -0.45
PCDHA6-202ENST00000527624 TRBV6-4A0A1B0GX49 114 aa12.23□□□□□ -0.45
PCDHA6-202ENST00000527624 CFC1BP0CG36 223 aa12.23□□□□□ -0.45
PCDHA6-202ENST00000527624 CFC1P0CG37 223 aa12.23□□□□□ -0.45
PCDHA6-202ENST00000527624 DEFB4AO15263 64 aa12.22□□□□□ -0.45
PCDHA6-202ENST00000527624 DGAT2L7PQ6IED9 249 aa12.22□□□□□ -0.45
PCDHA6-202ENST00000527624 PRO0461Q9UI25 63 aa12.22□□□□□ -0.45
PCDHA6-202ENST00000527624 CIDEAO60543 219 aa12.21□□□□□ -0.45
PCDHA6-202ENST00000527624 IGHV3-30-3P0DP02 117 aa12.21□□□□□ -0.45
PCDHA6-202ENST00000527624 APOC4P55056 127 aa12.21□□□□□ -0.45
PCDHA6-202ENST00000527624 KIR2DL5BQ8NHK3 375 aa12.21□□□□□ -0.45
PCDHA6-202ENST00000527624 C10orf126Q8N4M7 172 aa12.21□□□□□ -0.46
PCDHA6-202ENST00000527624 TIMM21Q9BVV7 248 aa12.21□□□□□ -0.46
PCDHA6-202ENST00000527624 FBN1P35555 2871 aaKnown RBP12.2□□□□□ -0.46
PCDHA6-202ENST00000527624 SMIM9A6NGZ8 99 aa12.2□□□□□ -0.46
PCDHA6-202ENST00000527624 TINCRA0A1B0GVN0 87 aa12.19□□□□□ -0.46
PCDHA6-202ENST00000527624 LINC00612Q8N6U2 182 aa12.19□□□□□ -0.46
PCDHA6-202ENST00000527624 LOC107984156A0A0G2JMH3 177 aa12.19□□□□□ -0.46
PCDHA6-202ENST00000527624 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
PCDHA6-202ENST00000527624 ARL17AQ8IVW1 177 aa12.19□□□□□ -0.46
PCDHA6-202ENST00000527624 MTURNQ8N3F0 131 aa12.19□□□□□ -0.46
PCDHA6-202ENST00000527624 TRAV8-3A0A0A6YYJ7 113 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 WIPF1O43516 503 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 IGHV4-30-4P0DP06 118 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 OXLD1Q5BKU9 147 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 SFTA2Q6UW10 78 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 SBSPONQ8IVN8 264 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 STAB1Q9NY15 2570 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 IGHV1-58A0A0C4DH39 117 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 A0A0J9YXY3 114 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 TMEM238C9JI98 176 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 ETDBQ3ZM63 59 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 PRO1854Q9UHT4 67 aa12.18□□□□□ -0.46
PCDHA6-202ENST00000527624 A4D1N5 150 aa12.17□□□□□ -0.46
PCDHA6-202ENST00000527624 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
PCDHA6-202ENST00000527624 C3orf56Q8N813 242 aa12.17□□□□□ -0.46
PCDHA6-202ENST00000527624 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
PCDHA6-202ENST00000527624 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
PCDHA6-202ENST00000527624 LYRM7Q5U5X0 104 aa12.16□□□□□ -0.46
PCDHA6-202ENST00000527624 MUSTN1Q8IVN3 82 aa12.16□□□□□ -0.46
PCDHA6-202ENST00000527624 GTSF1LQ9H1H1 148 aa12.16□□□□□ -0.46
PCDHA6-202ENST00000527624 GEMIN7Q9H840 131 aaKnown RBP12.16□□□□□ -0.46
PCDHA6-202ENST00000527624 UBE2L6O14933 153 aa12.15□□□□□ -0.46
PCDHA6-202ENST00000527624 PSMB2P49721 201 aa12.15□□□□□ -0.46
PCDHA6-202ENST00000527624 VSIG2Q96IQ7 327 aa12.15□□□□□ -0.46
PCDHA6-202ENST00000527624 SPINK8P0C7L1 97 aa12.14□□□□□ -0.47
PCDHA6-202ENST00000527624 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
PCDHA6-202ENST00000527624 LITAFQ99732 161 aa12.14□□□□□ -0.47
PCDHA6-202ENST00000527624 NDUFA12Q9UI09 145 aa12.14□□□□□ -0.47
PCDHA6-202ENST00000527624 TRAV13-1A0A0B4J241 112 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 GYPEP15421 78 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 CDKN2A-AS1Q9UH64 79 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms