RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 PYGO1Q9Y3Y4 419 aa8.72□□□□□ -1.01
SSSCA1-203ENST00000526877 TRAV8-6A0A0B4J262 113 aa8.71□□□□□ -1.02
SSSCA1-203ENST00000526877 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
SSSCA1-203ENST00000526877 PRSS1P07477 247 aa8.71□□□□□ -1.02
SSSCA1-203ENST00000526877 NPSP0C0P6 89 aa8.71□□□□□ -1.02
SSSCA1-203ENST00000526877 FGF6P10767 208 aa8.71□□□□□ -1.02
SSSCA1-203ENST00000526877 GAGE6Q13070 117 aa8.71□□□□□ -1.02
SSSCA1-203ENST00000526877 PAPPA-AS1Q5QFB9 102 aa8.71□□□□□ -1.02
SSSCA1-203ENST00000526877 TMEM101Q96IK0 257 aa8.71□□□□□ -1.02
SSSCA1-203ENST00000526877 UBE2D4Q9Y2X8 147 aa8.71□□□□□ -1.02
SSSCA1-203ENST00000526877 TMEM262E9PQX1 116 aa8.7□□□□□ -1.02
SSSCA1-203ENST00000526877 C3orf79P0CE67 100 aa8.7□□□□□ -1.02
SSSCA1-203ENST00000526877 ZNF25P17030 456 aaPredicted RBP8.7□□□□□ -1.02
SSSCA1-203ENST00000526877 MRPL52Q86TS9 123 aaKnown RBP8.7□□□□□ -1.02
SSSCA1-203ENST00000526877 H0Y8G0 127 aa8.69□□□□□ -1.02
SSSCA1-203ENST00000526877 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
SSSCA1-203ENST00000526877 ESRGQ1W209 222 aa8.69□□□□□ -1.02
SSSCA1-203ENST00000526877 PET117Q6UWS5 81 aa8.69□□□□□ -1.02
SSSCA1-203ENST00000526877 OR5A1Q8NGJ0 315 aa8.69□□□□□ -1.02
SSSCA1-203ENST00000526877 CSDC2Q9Y534 153 aaKnown RBP8.69□□□□□ -1.02
SSSCA1-203ENST00000526877 C20orf202A1L168 122 aa8.68□□□□□ -1.02
SSSCA1-203ENST00000526877 CCL18P55774 89 aa8.68□□□□□ -1.02
SSSCA1-203ENST00000526877 MRPS36P82909 103 aaKnown RBP8.68□□□□□ -1.02
SSSCA1-203ENST00000526877 BAALCQ8WXS3 180 aa8.68□□□□□ -1.02
SSSCA1-203ENST00000526877 VCX2Q9H322 139 aa8.68□□□□□ -1.02
SSSCA1-203ENST00000526877 IGLV4-3A0A075B6K6 122 aa8.67□□□□□ -1.02
SSSCA1-203ENST00000526877 A0A087WX48 190 aa8.67□□□□□ -1.02
SSSCA1-203ENST00000526877 SCGB1D1O95968 90 aa8.67□□□□□ -1.02
SSSCA1-203ENST00000526877 PMVKQ15126 192 aa8.67□□□□□ -1.02
SSSCA1-203ENST00000526877 Q6ZR54 194 aa8.67□□□□□ -1.02
SSSCA1-203ENST00000526877 SPATA12Q7Z6I5 190 aa8.67□□□□□ -1.02
SSSCA1-203ENST00000526877 DNAH17Q9UFH2 4485 aa8.66□□□□□ -1.02
SSSCA1-203ENST00000526877 TRAV12-1A0A0B4J245 112 aa8.66□□□□□ -1.02
SSSCA1-203ENST00000526877 A0A1B0GUV1 79 aa8.66□□□□□ -1.02
SSSCA1-203ENST00000526877 RTL8CO15255 209 aa8.66□□□□□ -1.02
SSSCA1-203ENST00000526877 JOSD1Q15040 202 aaPredicted RBP8.66□□□□□ -1.02
SSSCA1-203ENST00000526877 TEX43Q6ZNM6 134 aa8.66□□□□□ -1.02
SSSCA1-203ENST00000526877 ZNF664Q8N3J9 261 aa8.66□□□□□ -1.02
SSSCA1-203ENST00000526877 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
SSSCA1-203ENST00000526877 C2orf88Q9BSF0 95 aa8.66□□□□□ -1.02
SSSCA1-203ENST00000526877 DNAH2Q9P225 4427 aa8.65□□□□□ -1.02
SSSCA1-203ENST00000526877 M0R2N4 97 aa8.65□□□□□ -1.02
SSSCA1-203ENST00000526877 RBX1P62877 108 aa8.65□□□□□ -1.02
SSSCA1-203ENST00000526877 LINC00336Q6ZUF6 198 aa8.65□□□□□ -1.02
SSSCA1-203ENST00000526877 Q6ZUT4 128 aa8.65□□□□□ -1.02
SSSCA1-203ENST00000526877 CST9LQ9H4G1 147 aa8.65□□□□□ -1.02
SSSCA1-203ENST00000526877 CDC42SE2Q9NRR3 84 aa8.65□□□□□ -1.02
SSSCA1-203ENST00000526877 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
SSSCA1-203ENST00000526877 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
SSSCA1-203ENST00000526877 A0A1B0GVY2 172 aa8.64□□□□□ -1.03
SSSCA1-203ENST00000526877 PRSS29PA6NIE9 313 aa8.64□□□□□ -1.03
SSSCA1-203ENST00000526877 MPV17L2Q567V2 206 aa8.64□□□□□ -1.03
SSSCA1-203ENST00000526877 LINC01545Q5VT33 79 aa8.64□□□□□ -1.03
SSSCA1-203ENST00000526877 AMELXQ99217 191 aa8.64□□□□□ -1.03
SSSCA1-203ENST00000526877 CHTOPQ9Y3Y2 248 aaKnown RBP8.64□□□□□ -1.03
SSSCA1-203ENST00000526877 LINC00588Q9Y4M8 146 aa8.64□□□□□ -1.03
SSSCA1-203ENST00000526877 FAT2Q9NYQ8 4349 aa8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 HECTD4Q9Y4D8 3996 aa8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 IGLV4-60A0A075B6I1 120 aa8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 ODF1Q14990 250 aa8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 RNASE13Q5GAN3 156 aaKnown RBP8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 ZC2HC1BQ5TFG8 222 aa8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 WFDC10BQ8IUB3 73 aa8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 UBE2DNLQ8IWF7 75 aa8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 Q8N976 141 aa8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 FAM104AQ969W3 186 aa8.63□□□□□ -1.03
SSSCA1-203ENST00000526877 F8VRH5 84 aa8.62□□□□□ -1.03
SSSCA1-203ENST00000526877 ANGP03950 147 aaKnown RBP8.62□□□□□ -1.03
SSSCA1-203ENST00000526877 PYY3Q5JQD4 70 aa8.62□□□□□ -1.03
SSSCA1-203ENST00000526877 HERC2O95714 4834 aa8.62□□□□□ -1.03
SSSCA1-203ENST00000526877 DPM2O94777 84 aa8.61□□□□□ -1.03
SSSCA1-203ENST00000526877 IGHV3-30P01768 117 aa8.61□□□□□ -1.03
SSSCA1-203ENST00000526877 IGHV3-33P01772 117 aa8.61□□□□□ -1.03
SSSCA1-203ENST00000526877 IGHV3-30-3P0DP02 117 aa8.61□□□□□ -1.03
SSSCA1-203ENST00000526877 IGHV3-30-5P0DP03 117 aa8.61□□□□□ -1.03
SSSCA1-203ENST00000526877 PMCHL2Q9BQD1 86 aa8.61□□□□□ -1.03
SSSCA1-203ENST00000526877 UPK3BQ9BT76 320 aa8.61□□□□□ -1.03
SSSCA1-203ENST00000526877 MRPL35Q9NZE8 188 aaKnown RBP8.61□□□□□ -1.03
SSSCA1-203ENST00000526877 SIVA1O15304 175 aa8.6□□□□□ -1.03
SSSCA1-203ENST00000526877 SMIM6P0DI80 62 aa8.6□□□□□ -1.03
SSSCA1-203ENST00000526877 PLNP26678 52 aa8.6□□□□□ -1.03
SSSCA1-203ENST00000526877 LINC01556Q5JQF7 62 aa8.6□□□□□ -1.03
SSSCA1-203ENST00000526877 TRAV13-1A0A0B4J241 112 aa8.59□□□□□ -1.03
SSSCA1-203ENST00000526877 IGKV3OR2-268A0A0C4DH90 116 aa8.59□□□□□ -1.03
SSSCA1-203ENST00000526877 IGKCP01834 107 aa8.59□□□□□ -1.03
SSSCA1-203ENST00000526877 DNAH10OSP0CZ25 163 aa8.59□□□□□ -1.03
SSSCA1-203ENST00000526877 UBE2D1P51668 147 aa8.59□□□□□ -1.03
SSSCA1-203ENST00000526877 SEC11AP67812 179 aa8.59□□□□□ -1.03
SSSCA1-203ENST00000526877 LINC00269Q8N2A0 174 aa8.59□□□□□ -1.03
SSSCA1-203ENST00000526877 CCL25O15444 150 aa8.58□□□□□ -1.04
SSSCA1-203ENST00000526877 REG3AQ06141 175 aa8.58□□□□□ -1.04
SSSCA1-203ENST00000526877 SS18Q15532 418 aa8.58□□□□□ -1.04
SSSCA1-203ENST00000526877 Q8N3U1 123 aa8.58□□□□□ -1.04
SSSCA1-203ENST00000526877 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
SSSCA1-203ENST00000526877 KLK12Q9UKR0 248 aa8.58□□□□□ -1.04
SSSCA1-203ENST00000526877 PKD1P98161 4303 aa8.58□□□□□ -1.04
SSSCA1-203ENST00000526877 IGLV4-69A0A075B6H9 119 aa8.57□□□□□ -1.04
SSSCA1-203ENST00000526877 TRAV9-2A0A087WT02 112 aa8.57□□□□□ -1.04
SSSCA1-203ENST00000526877 A0A0J9YXV3 536 aa8.57□□□□□ -1.04
SSSCA1-203ENST00000526877 TINCRA0A1B0GVN0 87 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms