RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 KRTDAPP60985 99 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 SEC11AP67812 179 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 CCL8P80075 99 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 ADIRFQ15847 76 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 ZNF79Q15937 498 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 SLC48A1Q6P1K1 146 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 ZCCHC23Q6ZST2 131 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 HMGN2P46Q86SG4 172 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 OR8B3Q8NGG8 313 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 TMEM254Q8TBM7 123 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 GFRA4Q9GZZ7 299 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 ST20Q9HBF5 79 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 ASH1LQ9NR48 2969 aaKnown RBP2.73□□□□□ -1.97
CD44-213ENST00000525209 SMAD5-AS1Q9Y6J3 95 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 ICE1Q9Y2F5 2266 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 MAST4O15021 2626 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 ITPR1Q14643 2758 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 TENM4Q6N022 2769 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 CELSR3Q9NYQ7 3312 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 IGKV3D-15A0A087WSY6 115 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 IGKV3D-11A0A0A0MRZ8 115 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 TRAV10A0A0B4J240 114 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 HMSDA8MTL9 139 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 UBE2G1P62253 170 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 SPTAN1Q13813 2472 aaKnown RBP2.72□□□□□ -1.97
CD44-213ENST00000525209 DEFB113Q30KQ7 82 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 FAM213BQ8TBF2 198 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 PPDPFLQ8WWR9 84 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 S100ZQ8WXG8 99 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 COL12A1Q99715 3063 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 MGST2Q99735 147 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 LINC00474Q9P2X8 69 aa2.72□□□□□ -1.97
CD44-213ENST00000525209 USP9XQ93008 2570 aaPredicted RBP2.72□□□□□ -1.97
CD44-213ENST00000525209 PTPN13Q12923 2485 aa2.71□□□□□ -1.97
CD44-213ENST00000525209 DOPEY1Q5JWR5 2465 aa2.71□□□□□ -1.97
CD44-213ENST00000525209 MED13Q9UHV7 2174 aa2.71□□□□□ -1.97
CD44-213ENST00000525209 TEP1Q99973 2627 aaKnown RBP2.71□□□□□ -1.98
CD44-213ENST00000525209 NAP1L6A6NFF2 107 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 ERC2-IT1O76042 136 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 IGKV3-11P04433 115 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 ASAH2BP0C7U1 165 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 P0C880 135 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 HINT1P49773 126 aaPredicted RBP2.71□□□□□ -1.98
CD44-213ENST00000525209 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 LINC00483Q53H64 154 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 C9orf116Q5BN46 136 aaPredicted RBP2.71□□□□□ -1.98
CD44-213ENST00000525209 SERP2Q8N6R1 65 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 AMELYQ99218 206 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 CYTL1Q9NRR1 136 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 CACFD1Q9UGQ2 172 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 SPCS1Q9Y6A9 102 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 KIF25-AS1Q9Y6Z4 181 aa2.71□□□□□ -1.98
CD44-213ENST00000525209 DIDO1Q9BTC0 2240 aaKnown RBP2.7□□□□□ -1.98
CD44-213ENST00000525209 CFAP46Q8IYW2 2715 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 LAMA5O15230 3695 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 ANKRD36A6QL64 1941 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 TCRBV4S1A1TA0A5B7 111 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 PSCAO43653 123 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 IGLC2P0DOY2 106 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 IGLC3P0DOY3 106 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 ZNF791Q3KP31 576 aaPredicted RBP2.7□□□□□ -1.98
CD44-213ENST00000525209 OR10AG1Q8NH19 301 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 Q8TAT8 98 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 TRGV9Q99603 122 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 HIGD2AQ9BW72 106 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 LHFPL6Q9Y693 200 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 RP1L1Q8IWN7 2480 aaPredicted RBP2.7□□□□□ -1.98
CD44-213ENST00000525209 MGAQ8IWI9 3026 aa2.7□□□□□ -1.98
CD44-213ENST00000525209 NBASA2RRP1 2371 aa2.69□□□□□ -1.98
CD44-213ENST00000525209 MED13LQ71F56 2210 aa2.69□□□□□ -1.98
CD44-213ENST00000525209 TRBV10-3A0A0K0K1G6 114 aa2.69□□□□□ -1.98
CD44-213ENST00000525209 CFDP00746 253 aaPredicted RBP2.69□□□□□ -1.98
CD44-213ENST00000525209 GNG11P61952 73 aa2.69□□□□□ -1.98
CD44-213ENST00000525209 RPL7L1Q6DKI1 246 aaKnown RBP2.69□□□□□ -1.98
CD44-213ENST00000525209 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
CD44-213ENST00000525209 SCRT1Q9BWW7 348 aa2.69□□□□□ -1.98
CD44-213ENST00000525209 SPTBN1Q01082 2364 aaKnown RBP2.69□□□□□ -1.98
CD44-213ENST00000525209 ATMQ13315 3056 aa2.69□□□□□ -1.98
CD44-213ENST00000525209 ABCA12Q86UK0 2595 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 UTP20O75691 2785 aaKnown RBP2.68□□□□□ -1.98
CD44-213ENST00000525209 KALRNO60229 2985 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 MYO7BQ6PIF6 2116 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 ZGRF1Q86YA3 2104 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 TMSB15BA0A087X1C1 80 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 TRAV13-2A0A0B4J235 113 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 TRAV12-1A0A0B4J245 112 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 TRAV17A0A0B4J275 112 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 A0A1W2PPM0 123 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 A6NIN4 97 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 NDUFC1O43677 76 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 IGKV3-20P01619 116 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 RNASE2P10153 161 aaKnown RBP2.68□□□□□ -1.98
CD44-213ENST00000525209 COX6B1P14854 86 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 NDPQ00604 133 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 ETDBQ3ZM63 59 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 BVES-AS1Q5T3Y7 98 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 KRTAP26-1Q6PEX3 210 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 C2orf82Q6UX34 121 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 KRTAP1-5Q9BYS1 174 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 CYP4F30PQ9H0H9 118 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms