RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 LGALS9CQ6DKI2 356 aa10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 TMEM141Q96I45 108 aa10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 Q9H8V8 135 aa10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 HSPB8Q9UJY1 196 aa10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 CSDC2Q9Y534 153 aaKnown RBP10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 IGLV4-60A0A075B6I1 120 aa10.78□□□□□ -0.68
TSPAN4-213ENST00000524895 Q6ZN92 141 aa10.78□□□□□ -0.68
TSPAN4-213ENST00000524895 Q6ZUT4 128 aa10.78□□□□□ -0.68
TSPAN4-213ENST00000524895 IGLV4-3A0A075B6K6 122 aa10.77□□□□□ -0.69
TSPAN4-213ENST00000524895 ANGP03950 147 aaKnown RBP10.77□□□□□ -0.69
TSPAN4-213ENST00000524895 NPSP0C0P6 89 aa10.77□□□□□ -0.69
TSPAN4-213ENST00000524895 MRPS36P82909 103 aaKnown RBP10.77□□□□□ -0.69
TSPAN4-213ENST00000524895 PAPPA-AS1Q5QFB9 102 aa10.77□□□□□ -0.69
TSPAN4-213ENST00000524895 ZNF664Q8N3J9 261 aa10.77□□□□□ -0.69
TSPAN4-213ENST00000524895 PACRGQ96M98 296 aaPredicted RBP10.77□□□□□ -0.69
TSPAN4-213ENST00000524895 OPRPNQ99935 248 aaPredicted RBP10.77□□□□□ -0.69
TSPAN4-213ENST00000524895 RNASE13Q5GAN3 156 aaKnown RBP10.76□□□□□ -0.69
TSPAN4-213ENST00000524895 LINC00173Q6ZV60 143 aa10.76□□□□□ -0.69
TSPAN4-213ENST00000524895 LINC00476Q8WZB0 136 aa10.76□□□□□ -0.69
TSPAN4-213ENST00000524895 IFI27L1Q96BM0 104 aa10.76□□□□□ -0.69
TSPAN4-213ENST00000524895 HIST1H2BLQ99880 126 aa10.76□□□□□ -0.69
TSPAN4-213ENST00000524895 CDC42SE2Q9NRR3 84 aa10.76□□□□□ -0.69
TSPAN4-213ENST00000524895 LY6G6CO95867 125 aa10.75□□□□□ -0.69
TSPAN4-213ENST00000524895 TEX43Q6ZNM6 134 aa10.75□□□□□ -0.69
TSPAN4-213ENST00000524895 KLK12Q9UKR0 248 aa10.75□□□□□ -0.69
TSPAN4-213ENST00000524895 LYSTQ99698 3801 aa10.75□□□□□ -0.69
TSPAN4-213ENST00000524895 TRAV9-2A0A087WT02 112 aa10.74□□□□□ -0.69
TSPAN4-213ENST00000524895 CLPSL2Q6UWE3 100 aa10.74□□□□□ -0.69
TSPAN4-213ENST00000524895 LINC00269Q8N2A0 174 aa10.74□□□□□ -0.69
TSPAN4-213ENST00000524895 C10orf126Q8N4M7 172 aa10.74□□□□□ -0.69
TSPAN4-213ENST00000524895 BAALCQ8WXS3 180 aa10.74□□□□□ -0.69
TSPAN4-213ENST00000524895 FAM104AQ969W3 186 aa10.74□□□□□ -0.69
TSPAN4-213ENST00000524895 VCX2Q9H322 139 aa10.74□□□□□ -0.69
TSPAN4-213ENST00000524895 IFITM10A6NMD0 228 aa10.73□□□□□ -0.69
TSPAN4-213ENST00000524895 CRPP02741 224 aa10.73□□□□□ -0.69
TSPAN4-213ENST00000524895 PRSS1P07477 247 aa10.73□□□□□ -0.69
TSPAN4-213ENST00000524895 C2orf88Q9BSF0 95 aa10.73□□□□□ -0.69
TSPAN4-213ENST00000524895 MAP1LC3CQ9BXW4 147 aa10.73□□□□□ -0.69
TSPAN4-213ENST00000524895 IGKV3OR2-268A0A0C4DH90 116 aa10.72□□□□□ -0.69
TSPAN4-213ENST00000524895 H0Y8G0 127 aa10.72□□□□□ -0.69
TSPAN4-213ENST00000524895 K7EP13 123 aa10.72□□□□□ -0.69
TSPAN4-213ENST00000524895 REG3AQ06141 175 aa10.72□□□□□ -0.69
TSPAN4-213ENST00000524895 PMVKQ15126 192 aa10.72□□□□□ -0.69
TSPAN4-213ENST00000524895 TTC32Q5I0X7 151 aa10.72□□□□□ -0.69
TSPAN4-213ENST00000524895 ZC2HC1BQ5TFG8 222 aa10.72□□□□□ -0.69
TSPAN4-213ENST00000524895 KRTDAPP60985 99 aa10.71□□□□□ -0.69
TSPAN4-213ENST00000524895 UBE2WQ96B02 151 aa10.71□□□□□ -0.69
TSPAN4-213ENST00000524895 AMELXQ99217 191 aa10.71□□□□□ -0.69
TSPAN4-213ENST00000524895 NBDYA0A0U1RRE5 68 aa10.7□□□□□ -0.7
TSPAN4-213ENST00000524895 CST9LQ9H4G1 147 aa10.7□□□□□ -0.7
TSPAN4-213ENST00000524895 PRR34Q9NV39 138 aa10.7□□□□□ -0.7
TSPAN4-213ENST00000524895 TRAV13-1A0A0B4J241 112 aa10.69□□□□□ -0.7
TSPAN4-213ENST00000524895 IBA57-AS1B1ANH7 110 aa10.69□□□□□ -0.7
TSPAN4-213ENST00000524895 ALMS1Q8TCU4 4167 aa10.68□□□□□ -0.7
TSPAN4-213ENST00000524895 TRAV12-1A0A0B4J245 112 aa10.68□□□□□ -0.7
TSPAN4-213ENST00000524895 PRSS29PA6NIE9 313 aa10.68□□□□□ -0.7
TSPAN4-213ENST00000524895 SYS1-DBNDD2H3BUS1 97 aa10.68□□□□□ -0.7
TSPAN4-213ENST00000524895 C3orf79P0CE67 100 aa10.68□□□□□ -0.7
TSPAN4-213ENST00000524895 MIAQ16674 131 aa10.68□□□□□ -0.7
TSPAN4-213ENST00000524895 ENHOQ6UWT2 76 aa10.68□□□□□ -0.7
TSPAN4-213ENST00000524895 KRTAP1-5Q9BYS1 174 aa10.68□□□□□ -0.7
TSPAN4-213ENST00000524895 TRAV8-3A0A0A6YYJ7 113 aa10.67□□□□□ -0.7
TSPAN4-213ENST00000524895 LINC00959A0A1B0GUT2 108 aa10.67□□□□□ -0.7
TSPAN4-213ENST00000524895 UBE2D1P51668 147 aa10.67□□□□□ -0.7
TSPAN4-213ENST00000524895 SS18Q15532 418 aa10.67□□□□□ -0.7
TSPAN4-213ENST00000524895 OR10D4PQ8NGN7 298 aa10.67□□□□□ -0.7
TSPAN4-213ENST00000524895 Q9HAA7 133 aa10.67□□□□□ -0.7
TSPAN4-213ENST00000524895 VPS13DQ5THJ4 4388 aa10.66□□□□□ -0.7
TSPAN4-213ENST00000524895 IGLV10-54A0A075B6I4 117 aa10.66□□□□□ -0.7
TSPAN4-213ENST00000524895 PET117Q6UWS5 81 aa10.66□□□□□ -0.7
TSPAN4-213ENST00000524895 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
TSPAN4-213ENST00000524895 DNAH1Q9P2D7 4330 aa10.66□□□□□ -0.7
TSPAN4-213ENST00000524895 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.7
TSPAN4-213ENST00000524895 M0R2N4 97 aa10.65□□□□□ -0.7
TSPAN4-213ENST00000524895 CCL25O15444 150 aa10.65□□□□□ -0.7
TSPAN4-213ENST00000524895 ODF1Q14990 250 aa10.65□□□□□ -0.7
TSPAN4-213ENST00000524895 SPATA12Q7Z6I5 190 aa10.65□□□□□ -0.7
TSPAN4-213ENST00000524895 A0A0J9YXV3 536 aa10.64□□□□□ -0.71
TSPAN4-213ENST00000524895 C20orf202A1L168 122 aa10.64□□□□□ -0.71
TSPAN4-213ENST00000524895 F8VRH5 84 aa10.64□□□□□ -0.71
TSPAN4-213ENST00000524895 RMI2Q96E14 147 aa10.64□□□□□ -0.71
TSPAN4-213ENST00000524895 C1orf43Q9BWL3 253 aa10.64□□□□□ -0.71
TSPAN4-213ENST00000524895 MRPL35Q9NZE8 188 aaKnown RBP10.64□□□□□ -0.71
TSPAN4-213ENST00000524895 IGKV2D-24A0A075B6R9 120 aa10.63□□□□□ -0.71
TSPAN4-213ENST00000524895 LCE6AA0A183 80 aa10.63□□□□□ -0.71
TSPAN4-213ENST00000524895 XCL1P47992 114 aa10.63□□□□□ -0.71
TSPAN4-213ENST00000524895 SEC11AP67812 179 aa10.63□□□□□ -0.71
TSPAN4-213ENST00000524895 LINC00242Q5T6M2 205 aa10.63□□□□□ -0.71
TSPAN4-213ENST00000524895 CHCHD10Q8WYQ3 142 aaPredicted RBP10.63□□□□□ -0.71
TSPAN4-213ENST00000524895 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
TSPAN4-213ENST00000524895 CHAC1Q9BUX1 264 aa10.63□□□□□ -0.71
TSPAN4-213ENST00000524895 GEMIN7Q9H840 131 aaKnown RBP10.63□□□□□ -0.71
TSPAN4-213ENST00000524895 IGLV4-69A0A075B6H9 119 aa10.62□□□□□ -0.71
TSPAN4-213ENST00000524895 TINCRA0A1B0GVN0 87 aa10.62□□□□□ -0.71
TSPAN4-213ENST00000524895 IGLC3P0DOY3 106 aa10.62□□□□□ -0.71
TSPAN4-213ENST00000524895 LINC01545Q5VT33 79 aa10.62□□□□□ -0.71
TSPAN4-213ENST00000524895 FAM19A3Q7Z5A8 133 aa10.62□□□□□ -0.71
TSPAN4-213ENST00000524895 PLNP26678 52 aa10.61□□□□□ -0.71
TSPAN4-213ENST00000524895 HERVK_113P63121 156 aa10.61□□□□□ -0.71
TSPAN4-213ENST00000524895 Q6ZR54 194 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms