RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 DEFB4AO15263 64 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 LINC00694P0DN24 101 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 LGALS3P17931 250 aaKnown RBP7.03□□□□□ -1.28
VPS13B-212ENST00000524330 TIRAPP58753 221 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 HERVK_113P63121 156 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 HSD52Q0P140 79 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 BATFQ16520 125 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 Q9UF83 564 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 LOC100131303A0A0U1RQF7 123 aa7.02□□□□□ -1.29
VPS13B-212ENST00000524330 MYMXA0A1B0GTQ4 84 aa7.02□□□□□ -1.29
VPS13B-212ENST00000524330 H3BNG1 76 aa7.02□□□□□ -1.29
VPS13B-212ENST00000524330 LEPROTO15243 131 aa7.02□□□□□ -1.29
VPS13B-212ENST00000524330 HTN3P15516 51 aa7.02□□□□□ -1.29
VPS13B-212ENST00000524330 TAL2Q16559 108 aa7.02□□□□□ -1.29
VPS13B-212ENST00000524330 SBSPONQ8IVN8 264 aa7.02□□□□□ -1.29
VPS13B-212ENST00000524330 OPRPNQ99935 248 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-212ENST00000524330 A0A0J9YXV3 536 aa7.01□□□□□ -1.29
VPS13B-212ENST00000524330 CCL25O15444 150 aa7.01□□□□□ -1.29
VPS13B-212ENST00000524330 DEFB121Q5J5C9 76 aa7.01□□□□□ -1.29
VPS13B-212ENST00000524330 SCGB1D4Q6XE38 83 aa7.01□□□□□ -1.29
VPS13B-212ENST00000524330 NTM-AS1Q6ZSK4 140 aa7.01□□□□□ -1.29
VPS13B-212ENST00000524330 Q6ZUT4 128 aa7.01□□□□□ -1.29
VPS13B-212ENST00000524330 SNHG12Q9BXW3 62 aa7.01□□□□□ -1.29
VPS13B-212ENST00000524330 TMEM223A0PJW6 202 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 A6NDN8 102 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 ZNF815PA8K554 130 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 TMEM262E9PQX1 116 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 ZNF22P17026 224 aaPredicted RBP7□□□□□ -1.29
VPS13B-212ENST00000524330 HINT1P49773 126 aaPredicted RBP7□□□□□ -1.29
VPS13B-212ENST00000524330 UBE2D1P51668 147 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 TCTAP57738 103 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 GAGE6Q13070 117 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 KPRPQ5T749 579 aaPredicted RBP7□□□□□ -1.29
VPS13B-212ENST00000524330 PCP2Q8IVA1 136 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 LINC00469Q8N7U9 141 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 CDC42SE2Q9NRR3 84 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 CELA1Q9UNI1 258 aa7□□□□□ -1.29
VPS13B-212ENST00000524330 A0A0J9YY99 117 aa6.99□□□□□ -1.29
VPS13B-212ENST00000524330 A0A1B0GUV1 79 aa6.99□□□□□ -1.29
VPS13B-212ENST00000524330 J3QQQ9 107 aa6.99□□□□□ -1.29
VPS13B-212ENST00000524330 CEMP1Q6PRD7 247 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-212ENST00000524330 FAM19A3Q7Z5A8 133 aa6.99□□□□□ -1.29
VPS13B-212ENST00000524330 C11orf45Q8TAV5 145 aa6.99□□□□□ -1.29
VPS13B-212ENST00000524330 IGKV2D-26A0A0A0MRZ7 120 aa6.98□□□□□ -1.29
VPS13B-212ENST00000524330 EREGO14944 169 aa6.98□□□□□ -1.29
VPS13B-212ENST00000524330 SS18Q15532 418 aa6.98□□□□□ -1.29
VPS13B-212ENST00000524330 C12orf74Q32Q52 190 aa6.98□□□□□ -1.29
VPS13B-212ENST00000524330 VSIG2Q96IQ7 327 aa6.98□□□□□ -1.29
VPS13B-212ENST00000524330 NIPBLQ6KC79 2804 aaeCLIP6.97□□□□□ -1.29
VPS13B-212ENST00000524330 TRAV13-1A0A0B4J241 112 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 A6NJY4 79 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 GCSHP23434 173 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 MPV17L2Q567V2 206 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 RNASE13Q5GAN3 156 aaKnown RBP6.97□□□□□ -1.29
VPS13B-212ENST00000524330 BVES-AS1Q5T3Y7 98 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 LELP1Q5T871 98 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 C2orf91Q6ZV80 131 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 ORAOV1Q8WV07 137 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 HIST1H4GQ99525 98 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 RETNQ9HD89 108 aa6.97□□□□□ -1.29
VPS13B-212ENST00000524330 IGLV5-45A0A087WSX0 123 aa6.96□□□□□ -1.3
VPS13B-212ENST00000524330 PTTG1IPP53801 180 aa6.96□□□□□ -1.3
VPS13B-212ENST00000524330 SRSF9Q13242 221 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS13B-212ENST00000524330 TM2D3Q9BRN9 247 aa6.96□□□□□ -1.3
VPS13B-212ENST00000524330 TRAV10A0A0B4J240 114 aa6.95□□□□□ -1.3
VPS13B-212ENST00000524330 A0A0J9YWU9 116 aa6.95□□□□□ -1.3
VPS13B-212ENST00000524330 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
VPS13B-212ENST00000524330 K7EIL1 84 aa6.95□□□□□ -1.3
VPS13B-212ENST00000524330 CIRBPQ14011 172 aaKnown RBP6.95□□□□□ -1.3
VPS13B-212ENST00000524330 SFTA2Q6UW10 78 aa6.95□□□□□ -1.3
VPS13B-212ENST00000524330 MDFIQ99750 246 aa6.95□□□□□ -1.3
VPS13B-212ENST00000524330 DEFB131BA0A096LNP1 70 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 A0A096LPF7 62 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 RBX1P62877 108 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 LINC00242Q5T6M2 205 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 CEND1Q8N111 149 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 MAPKAPK5-AS1Q8N8E1 139 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 COPS9Q8WXC6 57 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 FAM104AQ969W3 186 aa6.94□□□□□ -1.3
VPS13B-212ENST00000524330 TENM1Q9UKZ4 2725 aa6.93□□□□□ -1.3
VPS13B-212ENST00000524330 SPINK8P0C7L1 97 aa6.93□□□□□ -1.3
VPS13B-212ENST00000524330 Q6ZVH6 145 aa6.93□□□□□ -1.3
VPS13B-212ENST00000524330 LINC01561Q8N1V8 128 aa6.93□□□□□ -1.3
VPS13B-212ENST00000524330 SPANXB1Q9NS25 103 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-212ENST00000524330 CDKN2A-AS1Q9UH64 79 aa6.93□□□□□ -1.3
VPS13B-212ENST00000524330 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
VPS13B-212ENST00000524330 IGKV3OR2-268A0A0C4DH90 116 aa6.92□□□□□ -1.3
VPS13B-212ENST00000524330 SMIM13P0DJ93 91 aa6.92□□□□□ -1.3
VPS13B-212ENST00000524330 HERV-K104P63124 156 aa6.92□□□□□ -1.3
VPS13B-212ENST00000524330 Q6ZTC4 211 aa6.92□□□□□ -1.3
VPS13B-212ENST00000524330 MRAPQ8TCY5 172 aa6.92□□□□□ -1.3
VPS13B-212ENST00000524330 TM2D2Q9BX73 214 aa6.92□□□□□ -1.3
VPS13B-212ENST00000524330 TTTY13Q9BZ97 58 aa6.92□□□□□ -1.3
VPS13B-212ENST00000524330 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
VPS13B-212ENST00000524330 IGLV4-60A0A075B6I1 120 aa6.91□□□□□ -1.3
VPS13B-212ENST00000524330 LINC00959A0A1B0GUT2 108 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms