RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 MUC21A0A140T8X8 626 aa2.58□□□□□ -2
SKP1-211ENST00000523359 H7BZZ5 65 aa2.58□□□□□ -2
SKP1-211ENST00000523359 CXCL8P10145 99 aa2.58□□□□□ -2
SKP1-211ENST00000523359 SNRPFP62306 86 aaKnown RBP2.58□□□□□ -2
SKP1-211ENST00000523359 PSMG4Q5JS54 123 aa2.58□□□□□ -2
SKP1-211ENST00000523359 NDUFA11Q86Y39 141 aa2.58□□□□□ -2
SKP1-211ENST00000523359 FAM213BQ8TBF2 198 aa2.58□□□□□ -2
SKP1-211ENST00000523359 C22orf24Q9Y442 160 aa2.58□□□□□ -2
SKP1-211ENST00000523359 R4GN34 69 aa2.58□□□□□ -2
SKP1-211ENST00000523359 USP9XQ93008 2570 aaPredicted RBP2.58□□□□□ -2
SKP1-211ENST00000523359 XRN1Q8IZH2 1706 aaKnown RBP2.57□□□□□ -2
SKP1-211ENST00000523359 ARFGEF2Q9Y6D5 1785 aa2.57□□□□□ -2
SKP1-211ENST00000523359 TMSB15BA0A087X1C1 80 aa2.57□□□□□ -2
SKP1-211ENST00000523359 HCG22E2RYF7 251 aa2.57□□□□□ -2
SKP1-211ENST00000523359 PDE6HQ13956 83 aa2.57□□□□□ -2
SKP1-211ENST00000523359 NMSQ5H8A3 153 aa2.57□□□□□ -2
SKP1-211ENST00000523359 PPP1R1CQ8WVI7 109 aa2.57□□□□□ -2
SKP1-211ENST00000523359 HIGD2AQ9BW72 106 aa2.57□□□□□ -2
SKP1-211ENST00000523359 PAPPAQ13219 1627 aa2.57□□□□□ -2
SKP1-211ENST00000523359 LAMA4Q16363 1823 aa2.56□□□□□ -2
SKP1-211ENST00000523359 NINQ8N4C6 2090 aa2.56□□□□□ -2
SKP1-211ENST00000523359 IGHV3-33P01772 117 aa2.56□□□□□ -2
SKP1-211ENST00000523359 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
SKP1-211ENST00000523359 UBE2D3P61077 147 aa2.56□□□□□ -2
SKP1-211ENST00000523359 UBE2D2P62837 147 aa2.56□□□□□ -2
SKP1-211ENST00000523359 KLKP1Q107X0 134 aa2.56□□□□□ -2
SKP1-211ENST00000523359 WFDC2Q14508 124 aa2.56□□□□□ -2
SKP1-211ENST00000523359 MPV17LQ2QL34 196 aa2.56□□□□□ -2
SKP1-211ENST00000523359 C2orf82Q6UX34 121 aa2.56□□□□□ -2
SKP1-211ENST00000523359 C18orf32Q8TCD1 76 aa2.56□□□□□ -2
SKP1-211ENST00000523359 FAM167A-AS1Q96KT0 104 aa2.56□□□□□ -2
SKP1-211ENST00000523359 ODF3Q96PU9 254 aa2.56□□□□□ -2
SKP1-211ENST00000523359 PKD1L3Q7Z443 1732 aa2.56□□□□□ -2
SKP1-211ENST00000523359 MPDZO75970 2070 aa2.56□□□□□ -2
SKP1-211ENST00000523359 MED12LQ86YW9 2145 aa2.56□□□□□ -2
SKP1-211ENST00000523359 GOLGB1Q14789 3259 aaKnown RBP2.55□□□□□ -2
SKP1-211ENST00000523359 BCE1O60756 84 aa2.55□□□□□ -2
SKP1-211ENST00000523359 SMIM11AP58511 58 aa2.55□□□□□ -2
SKP1-211ENST00000523359 KIAA0100Q14667 2235 aaKnown RBP2.55□□□□□ -2
SKP1-211ENST00000523359 QSER1Q2KHR3 1735 aa2.55□□□□□ -2
SKP1-211ENST00000523359 VMO1Q7Z5L0 202 aa2.55□□□□□ -2
SKP1-211ENST00000523359 EXPH5Q8NEV8 1989 aa2.55□□□□□ -2
SKP1-211ENST00000523359 MYOFQ9NZM1 2061 aa2.55□□□□□ -2
SKP1-211ENST00000523359 HEATR5BQ9P2D3 2071 aa2.55□□□□□ -2
SKP1-211ENST00000523359 SHANK1Q9Y566 2161 aa2.54□□□□□ -2
SKP1-211ENST00000523359 CD163L1Q9NR16 1453 aa2.54□□□□□ -2
SKP1-211ENST00000523359 CRYM-AS1A6NIL9 109 aa2.54□□□□□ -2
SKP1-211ENST00000523359 C2orf70A6NJV1 201 aa2.54□□□□□ -2
SKP1-211ENST00000523359 PRH1P02810 166 aa2.54□□□□□ -2
SKP1-211ENST00000523359 CNBPP62633 177 aaKnown RBP2.54□□□□□ -2
SKP1-211ENST00000523359 ERHP84090 104 aaKnown RBP2.54□□□□□ -2
SKP1-211ENST00000523359 MANBALQ9NQG1 85 aa2.54□□□□□ -2
SKP1-211ENST00000523359 HIGD1BQ9P298 99 aa2.54□□□□□ -2
SKP1-211ENST00000523359 MICAL3Q7RTP6 2002 aa2.53□□□□□ -2
SKP1-211ENST00000523359 IGFBP7Q16270 282 aa2.53□□□□□ -2
SKP1-211ENST00000523359 ZNF818PQ6ZRF7 136 aa2.53□□□□□ -2
SKP1-211ENST00000523359 CYP2G1PQ6ZSU1 146 aa2.53□□□□□ -2
SKP1-211ENST00000523359 BAGE3Q86Y29 109 aa2.53□□□□□ -2
SKP1-211ENST00000523359 BAGE2Q86Y30 109 aa2.53□□□□□ -2
SKP1-211ENST00000523359 NXT2Q9NPJ8 142 aaKnown RBP2.53□□□□□ -2
SKP1-211ENST00000523359 CMC2Q9NRP2 79 aa2.53□□□□□ -2
SKP1-211ENST00000523359 PTPN13Q12923 2485 aa2.53□□□□□ -2
SKP1-211ENST00000523359 TOGARAM1Q9Y4F4 1720 aa2.53□□□□□ -2
SKP1-211ENST00000523359 LMO7Q8WWI1 1683 aa2.53□□□□□ -2
SKP1-211ENST00000523359 ZFHX2Q9C0A1 2572 aaPredicted RBP2.53□□□□□ -2.01
SKP1-211ENST00000523359 NAV2Q8IVL1 2488 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 SHROOM3Q8TF72 1996 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 CACNA1BQ00975 2339 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 SEC16AO15027 2179 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 COL5A3P25940 1745 aaPredicted RBP2.52□□□□□ -2.01
SKP1-211ENST00000523359 DDX60LQ5H9U9 1706 aaKnown RBP2.52□□□□□ -2.01
SKP1-211ENST00000523359 TIAM2Q8IVF5 1701 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 A6NIN4 97 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 F2Z2F3 143 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 H3BUT2 72 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 SMIM13P0DJ93 91 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 EFNA4P52798 201 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 CAV3P56539 151 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 CFAP126Q5VTH2 177 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 Q5VV11 94 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 RPL7L1Q6DKI1 246 aaKnown RBP2.52□□□□□ -2.01
SKP1-211ENST00000523359 Q6ZTI0 123 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 SPTSSBQ8NFR3 76 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 TIMM21Q9BVV7 248 aa2.52□□□□□ -2.01
SKP1-211ENST00000523359 FAM208AQ9UK61 1670 aaKnown RBP2.52□□□□□ -2.01
SKP1-211ENST00000523359 C5P01031 1676 aa2.51□□□□□ -2.01
SKP1-211ENST00000523359 ALS2Q96Q42 1657 aa2.51□□□□□ -2.01
SKP1-211ENST00000523359 TRBV10-1A0A0K0K1A3 114 aa2.51□□□□□ -2.01
SKP1-211ENST00000523359 C3orf79P0CE67 100 aa2.51□□□□□ -2.01
SKP1-211ENST00000523359 UBE2D1P51668 147 aa2.51□□□□□ -2.01
SKP1-211ENST00000523359 C1orf137Q5JT78 98 aa2.51□□□□□ -2.01
SKP1-211ENST00000523359 TXNDC17Q9BRA2 123 aa2.51□□□□□ -2.01
SKP1-211ENST00000523359 CR1P17927 2039 aa2.51□□□□□ -2.01
SKP1-211ENST00000523359 MED13Q9UHV7 2174 aa2.5□□□□□ -2.01
SKP1-211ENST00000523359 ZGRF1Q86YA3 2104 aa2.5□□□□□ -2.01
SKP1-211ENST00000523359 TRAV12-3A0A0B4J271 114 aa2.5□□□□□ -2.01
SKP1-211ENST00000523359 TRAV22A0A0B4J277 110 aa2.5□□□□□ -2.01
SKP1-211ENST00000523359 COX8AP10176 69 aa2.5□□□□□ -2.01
SKP1-211ENST00000523359 HRES1P13985 223 aa2.5□□□□□ -2.01
SKP1-211ENST00000523359 BPESC1Q9GZL8 116 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms