RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
HMGB4-204ENST00000522796 ASCC3Q8N3C0 2202 aaKnown RBP5.82□□□□□ -1.48
HMGB4-204ENST00000522796 K7EIM0 57 aa5.81□□□□□ -1.48
HMGB4-204ENST00000522796 ZNRD1Q9P1U0 126 aa5.81□□□□□ -1.48
HMGB4-204ENST00000522796 BRWD1Q9NSI6 2320 aa5.81□□□□□ -1.48
HMGB4-204ENST00000522796 SPTBN5Q9NRC6 3674 aaKnown RBP5.81□□□□□ -1.48
HMGB4-204ENST00000522796 CCL3P10147 92 aa5.81□□□□□ -1.48
HMGB4-204ENST00000522796 HAMPP81172 84 aa5.81□□□□□ -1.48
HMGB4-204ENST00000522796 SMIM11BQ8TCY0 68 aa5.81□□□□□ -1.48
HMGB4-204ENST00000522796 TRBV6-8A0A0A6YYG3 113 aa5.8□□□□□ -1.48
HMGB4-204ENST00000522796 DEFB104AQ8WTQ1 72 aa5.8□□□□□ -1.48
HMGB4-204ENST00000522796 LENEPQ9Y5L5 61 aa5.8□□□□□ -1.48
HMGB4-204ENST00000522796 MALRD1Q5VYJ5 2156 aa5.8□□□□□ -1.48
HMGB4-204ENST00000522796 IGHV6-1A0A0B4J1U7 121 aa5.8□□□□□ -1.48
HMGB4-204ENST00000522796 APELAP0DMC3 54 aa5.8□□□□□ -1.48
HMGB4-204ENST00000522796 Q75L30 129 aa5.8□□□□□ -1.48
HMGB4-204ENST00000522796 OCR1Q9BZK8 76 aa5.8□□□□□ -1.48
HMGB4-204ENST00000522796 DNAJC13O75165 2243 aa5.8□□□□□ -1.48
HMGB4-204ENST00000522796 SDK2Q58EX2 2172 aa5.79□□□□□ -1.48
HMGB4-204ENST00000522796 IGHV3OR16-9A0A0B4J2B5 98 aa5.79□□□□□ -1.48
HMGB4-204ENST00000522796 PRSS33Q8NF86 280 aa5.79□□□□□ -1.48
HMGB4-204ENST00000522796 CADP27708 2225 aa5.79□□□□□ -1.48
HMGB4-204ENST00000522796 IGLV3-9A0A075B6K5 115 aa5.79□□□□□ -1.48
HMGB4-204ENST00000522796 TRBV10-1A0A0K0K1A3 114 aa5.79□□□□□ -1.48
HMGB4-204ENST00000522796 Q6ZTI0 123 aa5.79□□□□□ -1.48
HMGB4-204ENST00000522796 LIMD2Q9BT23 127 aa5.79□□□□□ -1.48
HMGB4-204ENST00000522796 CNTRLQ7Z7A1 2325 aa5.78□□□□□ -1.48
HMGB4-204ENST00000522796 LOC110117498A0A087WWA1 95 aa5.78□□□□□ -1.48
HMGB4-204ENST00000522796 RPL36AP83881 106 aaKnown RBP5.78□□□□□ -1.48
HMGB4-204ENST00000522796 RPL36ALQ969Q0 106 aaKnown RBP5.78□□□□□ -1.48
HMGB4-204ENST00000522796 IGLV5-45A0A087WSX0 123 aa5.78□□□□□ -1.48
HMGB4-204ENST00000522796 PINLYPA6NC86 204 aa5.78□□□□□ -1.48
HMGB4-204ENST00000522796 GNLYP22749 145 aa5.78□□□□□ -1.48
HMGB4-204ENST00000522796 Q6ZQT0 140 aa5.78□□□□□ -1.48
HMGB4-204ENST00000522796 FAM104AQ969W3 186 aa5.78□□□□□ -1.48
HMGB4-204ENST00000522796 FAM30AQ9NZY2 134 aa5.78□□□□□ -1.48
HMGB4-204ENST00000522796 SLPIP03973 132 aa5.77□□□□□ -1.49
HMGB4-204ENST00000522796 GYPEP15421 78 aa5.77□□□□□ -1.49
HMGB4-204ENST00000522796 FDCSPQ8NFU4 85 aa5.77□□□□□ -1.49
HMGB4-204ENST00000522796 HIGD2AQ9BW72 106 aa5.77□□□□□ -1.49
HMGB4-204ENST00000522796 IGLV5-39A0A0G2JS06 123 aa5.77□□□□□ -1.49
HMGB4-204ENST00000522796 C3orf84H3BNL1 204 aa5.77□□□□□ -1.49
HMGB4-204ENST00000522796 PRR9Q5T870 116 aa5.77□□□□□ -1.49
HMGB4-204ENST00000522796 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
HMGB4-204ENST00000522796 UNC80Q8N2C7 3258 aa5.76□□□□□ -1.49
HMGB4-204ENST00000522796 IGHV3-38A0A0C4DH36 116 aa5.76□□□□□ -1.49
HMGB4-204ENST00000522796 RNASE3P12724 160 aaKnown RBP5.76□□□□□ -1.49
HMGB4-204ENST00000522796 IGKV2-28A0A075B6P5 120 aa5.76□□□□□ -1.49
HMGB4-204ENST00000522796 F5H697 171 aa5.76□□□□□ -1.49
HMGB4-204ENST00000522796 IGKV2D-28P01615 120 aa5.76□□□□□ -1.49
HMGB4-204ENST00000522796 C9orf116Q5BN46 136 aaPredicted RBP5.76□□□□□ -1.49
HMGB4-204ENST00000522796 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.76□□□□□ -1.49
HMGB4-204ENST00000522796 C9orf106Q8NAJ2 232 aa5.76□□□□□ -1.49
HMGB4-204ENST00000522796 SEC16AO15027 2179 aa5.75□□□□□ -1.49
HMGB4-204ENST00000522796 REG3AQ06141 175 aa5.75□□□□□ -1.49
HMGB4-204ENST00000522796 MOBPQ13875 183 aa5.75□□□□□ -1.49
HMGB4-204ENST00000522796 FBXL19-AS1Q494R0 122 aa5.75□□□□□ -1.49
HMGB4-204ENST00000522796 RNASE13Q5GAN3 156 aaKnown RBP5.75□□□□□ -1.49
HMGB4-204ENST00000522796 LPAL2Q16609 132 aa5.75□□□□□ -1.49
HMGB4-204ENST00000522796 SCXQ7RTU7 201 aa5.75□□□□□ -1.49
HMGB4-204ENST00000522796 MAP6D1Q9H9H5 199 aa5.75□□□□□ -1.49
HMGB4-204ENST00000522796 PRUNE2Q8WUY3 3088 aa5.74□□□□□ -1.49
HMGB4-204ENST00000522796 M0QY20 66 aa5.74□□□□□ -1.49
HMGB4-204ENST00000522796 LY6HO94772 140 aa5.74□□□□□ -1.49
HMGB4-204ENST00000522796 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
HMGB4-204ENST00000522796 CDKN2A-AS1Q9UH64 79 aa5.74□□□□□ -1.49
HMGB4-204ENST00000522796 LCE6AA0A183 80 aa5.74□□□□□ -1.49
HMGB4-204ENST00000522796 CLPSL1A2RUU4 121 aa5.74□□□□□ -1.49
HMGB4-204ENST00000522796 C19orf84I3L1E1 186 aa5.74□□□□□ -1.49
HMGB4-204ENST00000522796 BSPH1Q075Z2 132 aa5.74□□□□□ -1.49
HMGB4-204ENST00000522796 SPTY2D1-AS1A0A0U1RR47 76 aa5.73□□□□□ -1.49
HMGB4-204ENST00000522796 PDE6GP18545 87 aa5.73□□□□□ -1.49
HMGB4-204ENST00000522796 SND1-IT1Q9HBX3 110 aa5.73□□□□□ -1.49
HMGB4-204ENST00000522796 COL27A1Q8IZC6 1860 aaPredicted RBP5.73□□□□□ -1.49
HMGB4-204ENST00000522796 ZNF318Q5VUA4 2279 aa5.73□□□□□ -1.49
HMGB4-204ENST00000522796 A6NED7 52 aa5.73□□□□□ -1.49
HMGB4-204ENST00000522796 ZFAND2AQ8N6M9 145 aa5.73□□□□□ -1.49
HMGB4-204ENST00000522796 NANOS2P60321 138 aaKnown RBP5.72□□□□□ -1.49
HMGB4-204ENST00000522796 ZNF843Q8N446 348 aa5.72□□□□□ -1.49
HMGB4-204ENST00000522796 CDC42SE2Q9NRR3 84 aa5.72□□□□□ -1.49
HMGB4-204ENST00000522796 PLCE1Q9P212 2302 aa5.72□□□□□ -1.49
HMGB4-204ENST00000522796 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.72□□□□□ -1.49
HMGB4-204ENST00000522796 B4DSR2 109 aa5.72□□□□□ -1.49
HMGB4-204ENST00000522796 F8W735 103 aaPredicted RBP5.72□□□□□ -1.49
HMGB4-204ENST00000522796 Q8N814 137 aa5.72□□□□□ -1.49
HMGB4-204ENST00000522796 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
HMGB4-204ENST00000522796 CELA1Q9UNI1 258 aa5.72□□□□□ -1.49
HMGB4-204ENST00000522796 MUC4Q99102 2169 aa5.72□□□□□ -1.49
HMGB4-204ENST00000522796 C9orf66Q5T8R8 295 aa5.71□□□□□ -1.5
HMGB4-204ENST00000522796 GAFA1Q96PS6 74 aa5.71□□□□□ -1.5
HMGB4-204ENST00000522796 PRR15LQ9BU68 103 aa5.71□□□□□ -1.5
HMGB4-204ENST00000522796 RETNLBQ9BQ08 111 aa5.71□□□□□ -1.5
HMGB4-204ENST00000522796 LOC101927531A0A1B0GV80 90 aa5.7□□□□□ -1.5
HMGB4-204ENST00000522796 K7EQD1 137 aa5.7□□□□□ -1.5
HMGB4-204ENST00000522796 LY6G6DO95868 133 aa5.7□□□□□ -1.5
HMGB4-204ENST00000522796 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
HMGB4-204ENST00000522796 CHCHD10Q8WYQ3 142 aaPredicted RBP5.7□□□□□ -1.5
HMGB4-204ENST00000522796 TRIOBPQ9H2D6 2365 aa5.7□□□□□ -1.5
HMGB4-204ENST00000522796 NTM-AS1Q6ZSK4 140 aa5.69□□□□□ -1.5
HMGB4-204ENST00000522796 F5P12259 2224 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms