RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ALG5Q9Y673 324 aa6.25□□□□□ -1.41
CTNNA1-234ENST00000522227 INMT-MINDY4F8WBC2 141 aa6.24□□□□□ -1.41
CTNNA1-234ENST00000522227 NCR2O95944 276 aa6.24□□□□□ -1.41
CTNNA1-234ENST00000522227 RPL28P46779 137 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-234ENST00000522227 ZNF726P1Q15940 193 aa6.24□□□□□ -1.41
CTNNA1-234ENST00000522227 CST9LP1Q5W188 147 aa6.24□□□□□ -1.41
CTNNA1-234ENST00000522227 UNQ6190/PRO20217Q6UXQ8 127 aa6.24□□□□□ -1.41
CTNNA1-234ENST00000522227 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
CTNNA1-234ENST00000522227 CDC42SE2Q9NRR3 84 aa6.24□□□□□ -1.41
CTNNA1-234ENST00000522227 MRPL35Q9NZE8 188 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-234ENST00000522227 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 TRAV13-1A0A0B4J241 112 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 G3V3Q6 166 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 MPC2O95563 127 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 MBP02144 154 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 PMCHP20382 165 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 BAGE2Q86Y30 109 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 ORAOV1Q8WV07 137 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 SMDT1Q9H4I9 107 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 C6orf48Q9UBA6 75 aa6.23□□□□□ -1.41
CTNNA1-234ENST00000522227 C1orf196B1AJZ1 125 aa6.22□□□□□ -1.41
CTNNA1-234ENST00000522227 NDUFA1O15239 70 aa6.22□□□□□ -1.41
CTNNA1-234ENST00000522227 NUPR1O60356 82 aa6.22□□□□□ -1.41
CTNNA1-234ENST00000522227 TRGC1P0CF51 173 aa6.22□□□□□ -1.41
CTNNA1-234ENST00000522227 NKX6-2Q9C056 277 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-234ENST00000522227 H2BFSP57053 126 aa6.21□□□□□ -1.42
CTNNA1-234ENST00000522227 C9orf129Q5T035 196 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-234ENST00000522227 SDHAF1A6NFY7 115 aa6.2□□□□□ -1.42
CTNNA1-234ENST00000522227 TLX1NBP0CAT3 122 aa6.2□□□□□ -1.42
CTNNA1-234ENST00000522227 IGLC6P0CF74 106 aa6.2□□□□□ -1.42
CTNNA1-234ENST00000522227 PET100P0DJ07 73 aa6.2□□□□□ -1.42
CTNNA1-234ENST00000522227 FP248Q71RG6 208 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-234ENST00000522227 MRAP2Q96G30 205 aa6.2□□□□□ -1.42
CTNNA1-234ENST00000522227 PSMG3Q9BT73 122 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-234ENST00000522227 TMEM242Q9NWH2 141 aa6.2□□□□□ -1.42
CTNNA1-234ENST00000522227 CTXND1A0A1B0GTU2 59 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 FAM240BA0A1B0GVZ2 78 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 SCO2A0A1W2PP80 73 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 BCE1O60756 84 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 SERF2P84101 59 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 MZT2BQ6NZ67 158 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 LYZL1Q6UWQ5 148 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 OR10D4PQ8NGN7 298 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 TNFSF18Q9UNG2 199 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 UBE2D4Q9Y2X8 147 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
CTNNA1-234ENST00000522227 USH2AO75445 5202 aa6.18□□□□□ -1.42
CTNNA1-234ENST00000522227 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-234ENST00000522227 TMEM241Q24JQ0 296 aa6.18□□□□□ -1.42
CTNNA1-234ENST00000522227 C3orf22Q8N5N4 141 aa6.18□□□□□ -1.42
CTNNA1-234ENST00000522227 LINC00469Q8N7U9 141 aa6.18□□□□□ -1.42
CTNNA1-234ENST00000522227 I3L3M4 83 aa6.17□□□□□ -1.42
CTNNA1-234ENST00000522227 PAGE4O60829 102 aa6.17□□□□□ -1.42
CTNNA1-234ENST00000522227 CTRLP40313 264 aa6.17□□□□□ -1.42
CTNNA1-234ENST00000522227 TWIST1Q15672 202 aa6.16□□□□□ -1.42
CTNNA1-234ENST00000522227 FAM229BQ4G0N7 80 aa6.16□□□□□ -1.42
CTNNA1-234ENST00000522227 MRPL52Q86TS9 123 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-234ENST00000522227 MARVELD1Q9BSK0 173 aa6.16□□□□□ -1.42
CTNNA1-234ENST00000522227 MAP1LC3B2A6NCE7 125 aa6.15□□□□□ -1.42
CTNNA1-234ENST00000522227 RPL37AP8A6NKH3 93 aa6.15□□□□□ -1.42
CTNNA1-234ENST00000522227 UBE2AP49459 152 aa6.15□□□□□ -1.42
CTNNA1-234ENST00000522227 FOXA3P55318 350 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-234ENST00000522227 LBHQ53QV2 105 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-234ENST00000522227 C2orf82Q6UX34 121 aa6.15□□□□□ -1.42
CTNNA1-234ENST00000522227 CCDC32Q9BV29 185 aa6.15□□□□□ -1.42
CTNNA1-234ENST00000522227 MAP1LC3BQ9GZQ8 125 aa6.15□□□□□ -1.42
CTNNA1-234ENST00000522227 RNASE7Q9H1E1 156 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-234ENST00000522227 C7orf77A4D0Y5 90 aa6.14□□□□□ -1.43
CTNNA1-234ENST00000522227 F2Z2F3 143 aa6.14□□□□□ -1.43
CTNNA1-234ENST00000522227 S100A9P06702 114 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-234ENST00000522227 RPS20P60866 119 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-234ENST00000522227 Q6ZUT4 128 aa6.14□□□□□ -1.43
CTNNA1-234ENST00000522227 TCEAL7Q9BRU2 100 aa6.14□□□□□ -1.43
CTNNA1-234ENST00000522227 IGLV8-61A0A075B6I0 122 aa6.13□□□□□ -1.43
CTNNA1-234ENST00000522227 A0A1B0GV50 99 aa6.13□□□□□ -1.43
CTNNA1-234ENST00000522227 A0A1B0GVG6 124 aa6.13□□□□□ -1.43
CTNNA1-234ENST00000522227 NDUFC2-KCTD14E9PQ53 114 aa6.13□□□□□ -1.43
CTNNA1-234ENST00000522227 F8WDY8 70 aa6.13□□□□□ -1.43
CTNNA1-234ENST00000522227 IFNA1P01562 189 aa6.13□□□□□ -1.43
CTNNA1-234ENST00000522227 FHITP49789 147 aa6.13□□□□□ -1.43
CTNNA1-234ENST00000522227 XAGE1AQ9HD64 81 aa6.13□□□□□ -1.43
CTNNA1-234ENST00000522227 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-234ENST00000522227 GAGE10A6NGK3 116 aa6.12□□□□□ -1.43
CTNNA1-234ENST00000522227 KRTAP4-16G5E9R7 235 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-234ENST00000522227 SSNA1O43805 119 aa6.12□□□□□ -1.43
CTNNA1-234ENST00000522227 CTAG1AP78358 180 aa6.12□□□□□ -1.43
CTNNA1-234ENST00000522227 AKR1C8PQ5T2L2 129 aa6.12□□□□□ -1.43
CTNNA1-234ENST00000522227 TMUB2Q71RG4 321 aa6.12□□□□□ -1.43
CTNNA1-234ENST00000522227 DAND5Q8N907 189 aa6.12□□□□□ -1.43
CTNNA1-234ENST00000522227 PCOTHQ58A44 107 aa6.11□□□□□ -1.43
CTNNA1-234ENST00000522227 C4orf48Q5BLP8 95 aa6.11□□□□□ -1.43
CTNNA1-234ENST00000522227 RPL7L1Q6DKI1 246 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-234ENST00000522227 MRPL55Q7Z7F7 128 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-234ENST00000522227 PACRGQ96M98 296 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-234ENST00000522227 ST20Q9HBF5 79 aa6.11□□□□□ -1.43
CTNNA1-234ENST00000522227 CYTL1Q9NRR1 136 aa6.11□□□□□ -1.43
CTNNA1-234ENST00000522227 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
CTNNA1-234ENST00000522227 PFDN1O60925 122 aa6.1□□□□□ -1.43
CTNNA1-234ENST00000522227 XP32Q5T750 250 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms