RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	GAS8-AS1	O95177	125 aa		4.58	□□□□□ -1.68
SPIDR-215	ENST00000521798	LTA	P01374	205 aa		4.58	□□□□□ -1.68
SPIDR-215	ENST00000521798	UBE2G1	P62253	170 aa		4.58	□□□□□ -1.68
SPIDR-215	ENST00000521798	C15orf53	Q8NAA6	179 aa		4.58	□□□□□ -1.68
SPIDR-215	ENST00000521798	ZC2HC1A	Q96GY0	325 aa		4.58	□□□□□ -1.68
SPIDR-215	ENST00000521798	ZFP30	Q9Y2G7	519 aa		4.58	□□□□□ -1.68
SPIDR-215	ENST00000521798		A0A0J9YY99	117 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	FABP5P3	A8MUU1	101 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	SH2D1A	O60880	128 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	IGHV3-53	P01767	116 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798		P0DMU3	169 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	FAM231A	P0DMU4	169 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	FAM231C	P0DMU5	169 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	BCL2	P10415	239 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	RNASE3	P12724	160 aa	Known RBP	4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	SYCN	Q0VAF6	134 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	COX19	Q49B96	90 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	RNASE13	Q5GAN3	156 aa	Known RBP	4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	DERL1	Q9BUN8	251 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	DNAH5	Q8TE73	4624 aa		4.57	□□□□□ -1.68
SPIDR-215	ENST00000521798	LOC389332	A0A1B0GUA5	103 aa		4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798		B4DEV8	164 aa		4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798		M0R2P5	195 aa		4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798	SFTA3	P0C7M3	94 aa		4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798	RPL35	P42766	123 aa	Known RBP	4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798	MEF2B	Q02080	365 aa	Predicted RBP	4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798	PDZD11	Q5EBL8	140 aa		4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798	FAM162B	Q5T6X4	162 aa		4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798	BAGE2	Q86Y30	109 aa		4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798	ORAOV1	Q8WV07	137 aa		4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798	TXNDC17	Q9BRA2	123 aa		4.56	□□□□□ -1.68
SPIDR-215	ENST00000521798		A0A096LNJ9	63 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	TRAV4	A0A0B4J268	109 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	TMEM223	A0PJW6	202 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798		H3BNG1	76 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798		M0R036	132 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	PDE6D	O43924	150 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	IFNA1	P01562	189 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	C4orf26	Q17RF5	130 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	DNLZ	Q5SXM8	178 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	FAM231D	Q6ZW35	169 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	RBM12B-AS1	Q9P1G2	102 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	LRP1B	Q9NZR2	4599 aa		4.55	□□□□□ -1.68
SPIDR-215	ENST00000521798	NACA	E9PAV3	2078 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	TRBV20OR9-2	A0A075B6H5	130 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798		A0A096LPF7	62 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	TINCR	A0A1B0GVN0	87 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	GRIFIN	A4D1Z8	144 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798		C9JCJ5	164 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	S100A4	P26447	101 aa	Known RBP	4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	ASIP	P42127	132 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	CRYBA4	P53673	196 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	CENPW	Q5EE01	88 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	CFAP126	Q5VTH2	177 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	UBE2DNL	Q8IWF7	75 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	SLC25A29	Q8N8R3	303 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	PTH2	Q96A98	100 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	IL36B	Q9NZH7	164 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	PRO0255	Q9UI72	69 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	HHLA3	Q9XRX5	114 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	LINC00588	Q9Y4M8	146 aa		4.54	□□□□□ -1.68
SPIDR-215	ENST00000521798	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	TMSB15B	A0A087X1C1	80 aa		4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	TRGV4	A0A0C4DH28	118 aa		4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798		H3BVH4	76 aa		4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	ARMS2	P0C7Q2	107 aa		4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	RPL19	P84098	196 aa	Known RBP	4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	ESRG	Q1W209	222 aa		4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	ZNRF2	Q8NHG8	242 aa		4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	SMIM12	Q96EX1	92 aa		4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	KRTAP2-2	Q9BYT5	123 aa		4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	MED9	Q9NWA0	146 aa		4.53	□□□□□ -1.68
SPIDR-215	ENST00000521798	IGLV2-18	A0A075B6J9	118 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	IGHV3-73	A0A0B4J1V6	119 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	C19orf71	A6NCJ1	209 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	HLA-DQA1	P01909	254 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	CXCL1	P09341	107 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	MGST1	P10620	155 aa	Known RBP	4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	GNG4	P50150	75 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	CCL18	P55774	89 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	TEX261	Q6UWH6	196 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	CHCHD7	Q9BUK0	85 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	ICOS	Q9Y6W8	199 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	KIAA1109	Q2LD37	5005 aa		4.52	□□□□□ -1.69
SPIDR-215	ENST00000521798	TRAV8-3	A0A0A6YYJ7	113 aa		4.51	□□□□□ -1.69
SPIDR-215	ENST00000521798		A8MWV9	139 aa		4.51	□□□□□ -1.69
SPIDR-215	ENST00000521798	TMEM250	H0YL14	139 aa		4.51	□□□□□ -1.69
SPIDR-215	ENST00000521798		M0R2N4	97 aa		4.51	□□□□□ -1.69
SPIDR-215	ENST00000521798	GATD1	Q8NB37	220 aa		4.51	□□□□□ -1.69
SPIDR-215	ENST00000521798	UPK3B	Q9BT76	320 aa		4.51	□□□□□ -1.69
SPIDR-215	ENST00000521798	MRPS16	Q9Y3D3	137 aa	Known RBP	4.51	□□□□□ -1.69
SPIDR-215	ENST00000521798	PHLDA3	Q9Y5J5	127 aa		4.51	□□□□□ -1.69
SPIDR-215	ENST00000521798	RYR1	P21817	5038 aa		4.51	□□□□□ -1.69
SPIDR-215	ENST00000521798	TRBV6-4	A0A1B0GX49	114 aa		4.5	□□□□□ -1.69
SPIDR-215	ENST00000521798	C8orf87	E5RJ46	101 aa		4.5	□□□□□ -1.69
SPIDR-215	ENST00000521798		M0R381	172 aa		4.5	□□□□□ -1.69
SPIDR-215	ENST00000521798	CRYGD	P07320	174 aa		4.5	□□□□□ -1.69
SPIDR-215	ENST00000521798	GZMB	P10144	247 aa		4.5	□□□□□ -1.69
SPIDR-215	ENST00000521798	SRI	P30626	198 aa		4.5	□□□□□ -1.69

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