RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
FAM49B-218ENST00000520887 NXT2Q9NPJ8 142 aaKnown RBP4.06□□□□□ -1.76
FAM49B-218ENST00000520887 DNAH9Q9NYC9 4486 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 K7EMI3 77 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 FABP9Q0Z7S8 132 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 IQCJQ1A5X6 159 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 MRPL51Q4U2R6 128 aaKnown RBP4.05□□□□□ -1.76
FAM49B-218ENST00000520887 Q6ZN92 141 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 NIT1Q86X76 327 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 RPL39LQ96EH5 51 aaKnown RBP4.05□□□□□ -1.76
FAM49B-218ENST00000520887 URB1-AS1Q96HZ7 61 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 TMEM70Q9BUB7 260 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 SMIM2Q9BVW6 85 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 Q9HAA7 133 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 TRAPPC1Q9Y5R8 145 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 STAB2Q8WWQ8 2551 aa4.05□□□□□ -1.76
FAM49B-218ENST00000520887 NBEAL2Q6ZNJ1 2754 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 TENM3Q9P273 2699 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 TRBV27A0A0K0K1C4 114 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 IFI27P40305 119 aaPredicted RBP4.04□□□□□ -1.76
FAM49B-218ENST00000520887 LINC00315P59091 139 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 RAB5BP61020 215 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 RPL32P62910 135 aaKnown RBP4.04□□□□□ -1.76
FAM49B-218ENST00000520887 GAGE6Q13070 117 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 MIAQ16674 131 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 C14orf177Q52M58 125 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 ORMDL2Q53FV1 153 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 PAPPA-AS1Q5QFB9 102 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 FA2HQ7L5A8 372 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 OR5A1Q8NGJ0 315 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 UBE2WQ96B02 151 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 RNF185Q96GF1 192 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 KLK12Q9UKR0 248 aa4.04□□□□□ -1.76
FAM49B-218ENST00000520887 TRBV24-1A0A075B6N3 115 aa4.03□□□□□ -1.76
FAM49B-218ENST00000520887 IGKV2D-24A0A075B6R9 120 aa4.03□□□□□ -1.76
FAM49B-218ENST00000520887 TRAV8-4A0A0B4J246 113 aa4.03□□□□□ -1.76
FAM49B-218ENST00000520887 IBA57-AS1B1ANH7 110 aa4.03□□□□□ -1.76
FAM49B-218ENST00000520887 SMKR1H3BMG3 65 aa4.03□□□□□ -1.76
FAM49B-218ENST00000520887 S100A1P23297 94 aa4.03□□□□□ -1.76
FAM49B-218ENST00000520887 SLC7A5P1Q8MH63 180 aa4.03□□□□□ -1.76
FAM49B-218ENST00000520887 C2orf88Q9BSF0 95 aa4.03□□□□□ -1.76
FAM49B-218ENST00000520887 CYSLTR1Q9Y271 337 aa4.03□□□□□ -1.76
FAM49B-218ENST00000520887 TGP01266 2768 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 LOC389332A0A1B0GUA5 103 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 A0A1B0GUV1 79 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 NPYP01303 97 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 FGF6P10767 208 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 RPS10P46783 165 aaKnown RBP4.02□□□□□ -1.77
FAM49B-218ENST00000520887 SS18Q15532 418 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 MPV17L2Q567V2 206 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 ATRAIDQ6UW56 229 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 SPANXA1Q9NS26 97 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 COL7A1Q02388 2944 aa4.02□□□□□ -1.77
FAM49B-218ENST00000520887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.01□□□□□ -1.77
FAM49B-218ENST00000520887 TGIF2-C20orf24A0A0A6YYL0 155 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 IGKV3OR2-268A0A0C4DH90 116 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 IGKV2-29A2NJV5 120 aaPredicted RBP4.01□□□□□ -1.77
FAM49B-218ENST00000520887 USP17L23D6RBM5 183 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 CCL25O15444 150 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 POLR2KP53803 58 aaKnown RBP4.01□□□□□ -1.77
FAM49B-218ENST00000520887 RBX1P62877 108 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 REG3AQ06141 175 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 CLPSL2Q6UWE3 100 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 Q6ZR54 194 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 Q8N8P6 123 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 PKIGQ9Y2B9 76 aa4.01□□□□□ -1.77
FAM49B-218ENST00000520887 APOMO95445 188 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 TSHBP01222 138 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 SEC11AP67812 179 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 KIAA1644Q3SXP7 199 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 TEX43Q6ZNM6 134 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 NTM-AS1Q6ZSK4 140 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 CBLN2Q8IUK8 224 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 LINC00269Q8N2A0 174 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 Q8N976 141 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 TIMM21Q9BVV7 248 aa4□□□□□ -1.77
FAM49B-218ENST00000520887 IFITM10A6NMD0 228 aa3.99□□□□□ -1.77
FAM49B-218ENST00000520887 HSBP1O75506 76 aa3.99□□□□□ -1.77
FAM49B-218ENST00000520887 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
FAM49B-218ENST00000520887 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
FAM49B-218ENST00000520887 C2orf66Q6UXQ4 117 aa3.99□□□□□ -1.77
FAM49B-218ENST00000520887 MRPL52Q86TS9 123 aaKnown RBP3.99□□□□□ -1.77
FAM49B-218ENST00000520887 BAGE3Q86Y29 109 aa3.99□□□□□ -1.77
FAM49B-218ENST00000520887 C20orf203Q8NBC4 194 aa3.99□□□□□ -1.77
FAM49B-218ENST00000520887 DEFB104AQ8WTQ1 72 aa3.99□□□□□ -1.77
FAM49B-218ENST00000520887 TMEM141Q96I45 108 aa3.99□□□□□ -1.77
FAM49B-218ENST00000520887 Q9UF83 564 aa3.99□□□□□ -1.77
FAM49B-218ENST00000520887 CSDC2Q9Y534 153 aaKnown RBP3.99□□□□□ -1.77
FAM49B-218ENST00000520887 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.98□□□□□ -1.77
FAM49B-218ENST00000520887 C1orf196B1AJZ1 125 aa3.98□□□□□ -1.77
FAM49B-218ENST00000520887 ESDP10768 282 aa3.98□□□□□ -1.77
FAM49B-218ENST00000520887 ZNF664Q8N3J9 261 aa3.98□□□□□ -1.77
FAM49B-218ENST00000520887 SCGB3A1Q96QR1 104 aa3.98□□□□□ -1.77
FAM49B-218ENST00000520887 ALKBH7Q9BT30 221 aaPredicted RBP3.98□□□□□ -1.77
FAM49B-218ENST00000520887 VCX2Q9H322 139 aa3.98□□□□□ -1.77
FAM49B-218ENST00000520887 UBE2D4Q9Y2X8 147 aa3.98□□□□□ -1.77
FAM49B-218ENST00000520887 IGLV4-60A0A075B6I1 120 aa3.97□□□□□ -1.77
FAM49B-218ENST00000520887 IGLV10-54A0A075B6I4 117 aa3.97□□□□□ -1.77
FAM49B-218ENST00000520887 TRAV13-1A0A0B4J241 112 aa3.97□□□□□ -1.77
FAM49B-218ENST00000520887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms