RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 CTXND1A0A1B0GTU2 59 aa3.63□□□□□ -1.83
PABPC1-216ENST00000520868 REG3AQ06141 175 aa3.63□□□□□ -1.83
PABPC1-216ENST00000520868 CIRBPQ14011 172 aaKnown RBP3.63□□□□□ -1.83
PABPC1-216ENST00000520868 TMEM97Q5BJF2 176 aa3.63□□□□□ -1.83
PABPC1-216ENST00000520868 Q5BKY6 102 aa3.63□□□□□ -1.83
PABPC1-216ENST00000520868 RPL7L1Q6DKI1 246 aaKnown RBP3.63□□□□□ -1.83
PABPC1-216ENST00000520868 LINC00299Q6ZSB3 139 aa3.63□□□□□ -1.83
PABPC1-216ENST00000520868 GTSF1Q8WW33 167 aa3.63□□□□□ -1.83
PABPC1-216ENST00000520868 AQP10Q96PS8 301 aa3.63□□□□□ -1.83
PABPC1-216ENST00000520868 ZNF471Q9BX82 626 aaPredicted RBP3.63□□□□□ -1.83
PABPC1-216ENST00000520868 NKX6-2Q9C056 277 aaPredicted RBP3.63□□□□□ -1.83
PABPC1-216ENST00000520868 KIF25-AS1Q9Y6Z4 181 aa3.63□□□□□ -1.83
PABPC1-216ENST00000520868 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.62□□□□□ -1.83
PABPC1-216ENST00000520868 IGHV1-24A0A0C4DH33 117 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 LTAP01374 205 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 SMIM17P0DL12 118 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 AKR1C3P42330 323 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 DEFA1P59665 94 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 CNBPP62633 177 aaKnown RBP3.62□□□□□ -1.83
PABPC1-216ENST00000520868 SPANXN1Q5VSR9 72 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 LYPD6BQ8NI32 183 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 C7orf33Q8WU49 177 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 RNF185Q96GF1 192 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 ALKBH7Q9BT30 221 aaPredicted RBP3.62□□□□□ -1.83
PABPC1-216ENST00000520868 VAX2Q9UIW0 290 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 ALG5Q9Y673 324 aa3.62□□□□□ -1.83
PABPC1-216ENST00000520868 IGLV4-60A0A075B6I1 120 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 BORCS7-ASMTA0A0B4J1R7 106 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 TRAV8-4A0A0B4J246 113 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 IGKV2-24A0A0C4DH68 120 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 MAP1LC3B2A6NCE7 125 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 RPL37AP8A6NKH3 93 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 P01737 135 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 MGPP08493 103 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 COX6A2Q02221 97 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 IQCJQ1A5X6 159 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 Q1RN00 199 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 MAJINQ3KP22 176 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 AKR1C8PQ5T2L2 129 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 C20orf203Q8NBC4 194 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 INO80EQ8NBZ0 244 aaPredicted RBP3.61□□□□□ -1.83
PABPC1-216ENST00000520868 STOML3Q8TAV4 291 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 SPACA4Q8TDM5 124 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 LINC01600Q96MT4 127 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 MAP1LC3BQ9GZQ8 125 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 PLAC8Q9NZF1 115 aa3.61□□□□□ -1.83
PABPC1-216ENST00000520868 FXYD6-FXYD2A0A087WZ82 144 aa3.6□□□□□ -1.83
PABPC1-216ENST00000520868 IGKV3OR2-268A0A0C4DH90 116 aa3.6□□□□□ -1.83
PABPC1-216ENST00000520868 A0A1B0GV50 99 aa3.6□□□□□ -1.83
PABPC1-216ENST00000520868 SNAI2O43623 268 aa3.6□□□□□ -1.83
PABPC1-216ENST00000520868 SULT1A2P50226 295 aa3.6□□□□□ -1.83
PABPC1-216ENST00000520868 NKX2-5P52952 324 aaPredicted RBP3.6□□□□□ -1.83
PABPC1-216ENST00000520868 BAGE2Q86Y30 109 aa3.6□□□□□ -1.83
PABPC1-216ENST00000520868 TPPP3Q9BW30 176 aa3.6□□□□□ -1.83
PABPC1-216ENST00000520868 MED28Q9H204 178 aa3.6□□□□□ -1.83
PABPC1-216ENST00000520868 A0A0J9YXV3 536 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 M0QY20 66 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 UBE2L6O14933 153 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 NDUFS6O75380 124 aaKnown RBP3.59□□□□□ -1.83
PABPC1-216ENST00000520868 CXCL1P09341 107 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 OR5AL1P0C617 328 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 GZMBP10144 247 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 RPS10P46783 165 aaKnown RBP3.59□□□□□ -1.83
PABPC1-216ENST00000520868 FHITP49789 147 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
PABPC1-216ENST00000520868 C15orf56Q8N910 161 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 AP1S3Q96PC3 154 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 TCEAL7Q9BRU2 100 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 TMEM243Q9BU79 118 aa3.59□□□□□ -1.83
PABPC1-216ENST00000520868 H7C1H1 209 aa3.58□□□□□ -1.84
PABPC1-216ENST00000520868 S100A9P06702 114 aaKnown RBP3.58□□□□□ -1.84
PABPC1-216ENST00000520868 GIPP09681 153 aaPredicted RBP3.58□□□□□ -1.84
PABPC1-216ENST00000520868 LINC00242Q5T6M2 205 aa3.58□□□□□ -1.84
PABPC1-216ENST00000520868 RASL11AQ6T310 242 aa3.58□□□□□ -1.84
PABPC1-216ENST00000520868 SPINK6Q6UWN8 80 aa3.58□□□□□ -1.84
PABPC1-216ENST00000520868 SFT2D1Q8WV19 159 aa3.58□□□□□ -1.84
PABPC1-216ENST00000520868 CYTL1Q9NRR1 136 aa3.58□□□□□ -1.84
PABPC1-216ENST00000520868 A0A096LNI7 61 aa3.57□□□□□ -1.84
PABPC1-216ENST00000520868 PFDN1O60925 122 aa3.57□□□□□ -1.84
PABPC1-216ENST00000520868 COTL1Q14019 142 aa3.57□□□□□ -1.84
PABPC1-216ENST00000520868 OR2D3Q8NGH3 330 aa3.57□□□□□ -1.84
PABPC1-216ENST00000520868 FAM213BQ8TBF2 198 aa3.57□□□□□ -1.84
PABPC1-216ENST00000520868 CHCHD10Q8WYQ3 142 aaPredicted RBP3.57□□□□□ -1.84
PABPC1-216ENST00000520868 LINC00526Q96FQ7 95 aa3.57□□□□□ -1.84
PABPC1-216ENST00000520868 NIT2Q9NQR4 276 aa3.57□□□□□ -1.84
PABPC1-216ENST00000520868 ARPC5O15511 151 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 IGLC6P0CF74 106 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 RPL35P42766 123 aaKnown RBP3.56□□□□□ -1.84
PABPC1-216ENST00000520868 CACNG7P62955 275 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 LBHQ53QV2 105 aaPredicted RBP3.56□□□□□ -1.84
PABPC1-216ENST00000520868 AMMECR1LQ6DCA0 310 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 RNASEKQ6P5S7 137 aaKnown RBP3.56□□□□□ -1.84
PABPC1-216ENST00000520868 LYZL1Q6UWQ5 148 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 KCNRGQ8N5I3 272 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 FER1L6-AS1Q8NA97 138 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 MBD3L1Q8WWY6 194 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 PGLYRP4Q96LB8 373 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 ANAPC11Q9NYG5 84 aa3.56□□□□□ -1.84
PABPC1-216ENST00000520868 MUC2Q02817 5179 aa3.55□□□□□ -1.84
PABPC1-216ENST00000520868 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms