RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 BAALCQ8WXS3 180 aa6.14□□□□□ -1.43
CSMD1-208ENST00000520561 C2orf88Q9BSF0 95 aa6.14□□□□□ -1.43
CSMD1-208ENST00000520561 LINC00588Q9Y4M8 146 aa6.14□□□□□ -1.43
CSMD1-208ENST00000520561 TRAV12-1A0A0B4J245 112 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 A0A1B0GUV1 79 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 C3orf84H3BNL1 204 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 SYS1-DBNDD2H3BUS1 97 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 C3orf79P0CE67 100 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 PMVKQ15126 192 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 PET117Q6UWS5 81 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 Q8N976 141 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 UPK3BQ9BT76 320 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 VCX2Q9H322 139 aa6.13□□□□□ -1.43
CSMD1-208ENST00000520561 IGLV4-60A0A075B6I1 120 aa6.12□□□□□ -1.43
CSMD1-208ENST00000520561 SIVA1O15304 175 aa6.12□□□□□ -1.43
CSMD1-208ENST00000520561 IGHV3-30P01768 117 aa6.12□□□□□ -1.43
CSMD1-208ENST00000520561 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
CSMD1-208ENST00000520561 ANGP03950 147 aaKnown RBP6.12□□□□□ -1.43
CSMD1-208ENST00000520561 IGHV3-30-3P0DP02 117 aa6.12□□□□□ -1.43
CSMD1-208ENST00000520561 IGHV3-30-5P0DP03 117 aa6.12□□□□□ -1.43
CSMD1-208ENST00000520561 RNASE13Q5GAN3 156 aaKnown RBP6.12□□□□□ -1.43
CSMD1-208ENST00000520561 LINC01556Q5JQF7 62 aa6.12□□□□□ -1.43
CSMD1-208ENST00000520561 ZNF664Q8N3J9 261 aa6.12□□□□□ -1.43
CSMD1-208ENST00000520561 CDC42SE2Q9NRR3 84 aa6.12□□□□□ -1.43
CSMD1-208ENST00000520561 LOC105371267A0A1B0GV96 52 aa6.11□□□□□ -1.43
CSMD1-208ENST00000520561 CRPP02741 224 aa6.11□□□□□ -1.43
CSMD1-208ENST00000520561 LGALS9CQ6DKI2 356 aa6.11□□□□□ -1.43
CSMD1-208ENST00000520561 SPATA12Q7Z6I5 190 aa6.11□□□□□ -1.43
CSMD1-208ENST00000520561 AMELXQ99217 191 aa6.11□□□□□ -1.43
CSMD1-208ENST00000520561 OPRPNQ99935 248 aaPredicted RBP6.11□□□□□ -1.43
CSMD1-208ENST00000520561 CHTOPQ9Y3Y2 248 aaKnown RBP6.11□□□□□ -1.43
CSMD1-208ENST00000520561 IGKV3OR2-268A0A0C4DH90 116 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 PRSS29PA6NIE9 313 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 F8VRH5 84 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 SCGB1D1O95968 90 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 DNAH10OSP0CZ25 163 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 ODF1Q14990 250 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 CASC10Q5T4H9 136 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 ZC2HC1BQ5TFG8 222 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 LINC01545Q5VT33 79 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 CLPSL2Q6UWE3 100 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 Q8N3U1 123 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 C10orf126Q8N4M7 172 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 CST9LQ9H4G1 147 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 KLK12Q9UKR0 248 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 COL7A1Q02388 2944 aa6.1□□□□□ -1.43
CSMD1-208ENST00000520561 TRAV9-2A0A087WT02 112 aa6.09□□□□□ -1.43
CSMD1-208ENST00000520561 TRAV13-1A0A0B4J241 112 aa6.09□□□□□ -1.43
CSMD1-208ENST00000520561 PLNP26678 52 aa6.09□□□□□ -1.43
CSMD1-208ENST00000520561 SEC11AP67812 179 aa6.09□□□□□ -1.43
CSMD1-208ENST00000520561 LINC00269Q8N2A0 174 aa6.09□□□□□ -1.43
CSMD1-208ENST00000520561 FAM104AQ969W3 186 aa6.09□□□□□ -1.43
CSMD1-208ENST00000520561 PMCHL2Q9BQD1 86 aa6.09□□□□□ -1.43
CSMD1-208ENST00000520561 Q9H8V8 135 aa6.09□□□□□ -1.43
CSMD1-208ENST00000520561 MRPL35Q9NZE8 188 aaKnown RBP6.09□□□□□ -1.43
CSMD1-208ENST00000520561 DPM2O94777 84 aa6.08□□□□□ -1.44
CSMD1-208ENST00000520561 IGKCP01834 107 aa6.08□□□□□ -1.44
CSMD1-208ENST00000520561 UBE2D1P51668 147 aa6.08□□□□□ -1.44
CSMD1-208ENST00000520561 REG3AQ06141 175 aa6.08□□□□□ -1.44
CSMD1-208ENST00000520561 JOSD1Q15040 202 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-208ENST00000520561 SS18Q15532 418 aa6.08□□□□□ -1.44
CSMD1-208ENST00000520561 UBE2WQ96B02 151 aa6.08□□□□□ -1.44
CSMD1-208ENST00000520561 CHAC1Q9BUX1 264 aa6.08□□□□□ -1.44
CSMD1-208ENST00000520561 GEMIN7Q9H840 131 aaKnown RBP6.08□□□□□ -1.44
CSMD1-208ENST00000520561 IGLV4-69A0A075B6H9 119 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 LINC00959A0A1B0GUT2 108 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 TINCRA0A1B0GVN0 87 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 K7EP13 123 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 CCL25O15444 150 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 SMIM6P0DI80 62 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 IGLC3P0DOY3 106 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 HERVK_113P63121 156 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 TTC32Q5I0X7 151 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 PRR34Q9NV39 138 aa6.07□□□□□ -1.44
CSMD1-208ENST00000520561 A0A0J9YXV3 536 aa6.06□□□□□ -1.44
CSMD1-208ENST00000520561 C11orf86A6NJI1 115 aa6.06□□□□□ -1.44
CSMD1-208ENST00000520561 MIAQ16674 131 aa6.06□□□□□ -1.44
CSMD1-208ENST00000520561 PYY3Q5JQD4 70 aa6.06□□□□□ -1.44
CSMD1-208ENST00000520561 NFE4Q86UQ8 179 aa6.06□□□□□ -1.44
CSMD1-208ENST00000520561 DYNC2H1Q8NCM8 4307 aaKnown RBP6.06□□□□□ -1.44
CSMD1-208ENST00000520561 DNAH7Q8WXX0 4024 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 TRAV8-3A0A0A6YYJ7 113 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 TRAV8-4A0A0B4J246 113 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 IBA57-AS1B1ANH7 110 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 HSBP1L1C9JCN9 74 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 H3BRM9 83 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 HERVK_113P61574 105 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 TMEM170BQ5T4T1 132 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 LINC00242Q5T6M2 205 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 FAM19A3Q7Z5A8 133 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 ATOH7Q8N100 152 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 LINC00469Q8N7U9 141 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 CHCHD10Q8WYQ3 142 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-208ENST00000520561 RMI2Q96E14 147 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 C1orf43Q9BWL3 253 aa6.05□□□□□ -1.44
CSMD1-208ENST00000520561 IGLV10-54A0A075B6I4 117 aa6.04□□□□□ -1.44
CSMD1-208ENST00000520561 LY6G6CO95867 125 aa6.04□□□□□ -1.44
CSMD1-208ENST00000520561 ZNF22P17026 224 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-208ENST00000520561 XCL1P47992 114 aa6.04□□□□□ -1.44
CSMD1-208ENST00000520561 ENHOQ6UWT2 76 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms