RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 H7C2G1 150 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 NDUFA3O95167 84 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 IGKV1D-16P01601 117 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 IGLV3-1P01715 115 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 IGHV3-30P01768 117 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 IGHV3-33P01772 117 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 COX6CP09669 75 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 ARMS2P0C7Q2 107 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 IGHV3-30-5P0DP03 117 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 LGALS3P17931 250 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 XCL1P47992 114 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 RBM3P98179 157 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 CIRBPQ14011 172 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 NCOA6Q14686 2063 aaPredicted RBP1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 SPINK9Q5DT21 86 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 EYSQ5T1H1 3165 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 BRD3OSQ6XYD6 125 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 KTN1-AS1Q86SY8 53 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 Q86TA4 180 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 DCANP1Q8TF63 244 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 TMEM263Q8WUH6 116 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 C11orf68Q9H3H3 251 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 LINC00474Q9P2X8 69 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 SCN10AQ9Y5Y9 1956 aa1.53□□□□□ -2.16
TRAPPC13-212ENST00000520525 ANKHD1Q8IWZ3 2542 aaKnown RBP1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 NOTCH1P46531 2555 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 ZFHX2Q9C0A1 2572 aaPredicted RBP1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 IGKV1D-43A0A0B4J1Z2 117 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 TRAV3A0A0B4J244 114 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 IGKV1-12A0A0C4DH73 117 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 C8orf87E5RJ46 101 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 H7BZZ5 65 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 LST1O00453 97 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 NDUFB3O43676 98 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 NDUFS5O43920 106 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 DNAL4O96015 105 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 IGKV1D-12P01611 117 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 CCKP06307 115 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 INAFM2P0DMQ5 153 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 COX6B1P14854 86 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 HMGA1P17096 107 aaKnown RBP1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 CKS2P33552 79 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 PLGLAQ15195 96 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 RHOHQ15669 191 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 MRPL51Q4U2R6 128 aaKnown RBP1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 S100A7L2Q5SY68 101 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 ATP5EP2Q5VTU8 51 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 LINC00322Q6ZN03 302 aaPredicted RBP1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 DYNAPQ8N1N2 210 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 C20orf197Q8N268 126 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 TM2D3Q9BRN9 247 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 TIMM21Q9BVV7 248 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 ICOSQ9Y6W8 199 aa1.52□□□□□ -2.17
TRAPPC13-212ENST00000520525 TRAV13-2A0A0B4J235 113 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 IGKV2-24A0A0C4DH68 120 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 TRBV27A0A0K0K1C4 114 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 TRBV6-1A0A0K0K1D8 114 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 TMEM30CPA0ZSE6 113 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 IBA57-AS1B1ANH7 110 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 F8WEM9 126 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 TMEM256-PLSCR3K7ERE1 68 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 UBE2L6O14933 153 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 NDUFC1O43677 76 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 COX7A2P2O60397 106 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 BCE1O60756 84 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 IGLV7-43P04211 117 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 UBE2BP63146 152 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 KLKP1Q107X0 134 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 NNATQ16517 81 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 C10orf113Q5VZT2 155 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 LYPD5Q6UWN5 251 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 TMEM75Q8N9X5 138 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 SPTSSAQ969W0 71 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 FXYD5Q96DB9 178 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 FAM167A-AS1Q96KT0 104 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 UBE2D4Q9Y2X8 147 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 LTBP2Q14767 1821 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 SZT2Q5T011 3432 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 VCANP13611 3396 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 COL6A5A8TX70 2615 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 ATG2BQ96BY7 2078 aa1.51□□□□□ -2.17
TRAPPC13-212ENST00000520525 SPG11Q96JI7 2443 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 COL5A1P20908 1838 aaPredicted RBP1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 TRAV7A0A075B6U4 112 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 A0A087WVE0 104 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 TRAV8-3A0A0A6YYJ7 113 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 IGHV6-1A0A0B4J1U7 121 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 CXorf51AA0A1B0GTR3 108 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 C17orf98A8MV24 154 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 E7EUB6 86 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 J3QT63 122 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 M0R378 163 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 M0R3E3 92 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 ZNF73O43830 326 aaPredicted RBP1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 SH2D1AO60880 128 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 P0C880 135 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 BLCAPP62952 87 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 ESRGQ1W209 222 aa1.5□□□□□ -2.17
TRAPPC13-212ENST00000520525 DEFB134Q4QY38 66 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms