RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 MGPP08493 103 aa4.53□□□□□ -1.68
SDCBP-208ENST00000520228 TRGC1P0CF51 173 aa4.53□□□□□ -1.68
SDCBP-208ENST00000520228 LINC00694P0DN24 101 aa4.53□□□□□ -1.68
SDCBP-208ENST00000520228 NTF3P20783 257 aa4.53□□□□□ -1.68
SDCBP-208ENST00000520228 CTRLP40313 264 aa4.53□□□□□ -1.68
SDCBP-208ENST00000520228 RAB14P61106 215 aa4.53□□□□□ -1.68
SDCBP-208ENST00000520228 SMDT1Q9H4I9 107 aa4.53□□□□□ -1.68
SDCBP-208ENST00000520228 DNAH10Q8IVF4 4471 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 LINC00315P59091 139 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 UBE2D3P61077 147 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 UBE2D2P62837 147 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 LINC01556Q5JQF7 62 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 C15orf54Q8N8G6 183 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-208ENST00000520228 PGLYRP4Q96LB8 373 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 CNFNQ9BYD5 112 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 OSTCQ9NRP0 149 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 DNAH2Q9P225 4427 aa4.52□□□□□ -1.69
SDCBP-208ENST00000520228 H7C1H1 209 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 M0QY20 66 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 IGHV3-30P01768 117 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 IGHV3-33P01772 117 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 IGHV3-30-3P0DP02 117 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 IGHV3-30-5P0DP03 117 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 RPL23P62829 140 aaKnown RBP4.51□□□□□ -1.69
SDCBP-208ENST00000520228 RPL32P62910 135 aaKnown RBP4.51□□□□□ -1.69
SDCBP-208ENST00000520228 ADIRFQ15847 76 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 SMIM15Q7Z3B0 74 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 CEND1Q8N111 149 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 TSKUQ8WUA8 353 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 ISOC2Q96AB3 205 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 BORCS7Q96B45 105 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 DPH3P1Q9H4G8 78 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 NAT8Q9UHE5 227 aa4.51□□□□□ -1.69
SDCBP-208ENST00000520228 DNAH6Q9C0G6 4158 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 TRBV6-8A0A0A6YYG3 113 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 FAM231BA6NCW3 169 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 HIGD1CA8MV81 97 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 IBA57-AS1B1ANH7 110 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 E9PLD3 99 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 FOXA3P55318 350 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-208ENST00000520228 LINC01620Q4KN68 170 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 RASL11AQ6T310 242 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 Q6ZRN7 208 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-208ENST00000520228 DAZ4Q86SG3 579 aaKnown RBP4.5□□□□□ -1.69
SDCBP-208ENST00000520228 DNAJC30Q96LL9 226 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 DAZ3Q9NR90 486 aaKnown RBP4.5□□□□□ -1.69
SDCBP-208ENST00000520228 URGCP-MRPS24S4R325 110 aa4.5□□□□□ -1.69
SDCBP-208ENST00000520228 A0A087WX48 190 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 A0A1B0GUT8 65 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 TMEM262E9PQX1 116 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 TMEM97Q5BJF2 176 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 CLLU1Q5K131 121 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 KCNIP4Q6PIL6 250 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 ERASQ7Z444 233 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 NIT1Q86X76 327 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 NIT2Q9NQR4 276 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 V9GYV3 84 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 FRAS1Q86XX4 4008 aa4.49□□□□□ -1.69
SDCBP-208ENST00000520228 HECTD4Q9Y4D8 3996 aa4.48□□□□□ -1.69
SDCBP-208ENST00000520228 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
SDCBP-208ENST00000520228 TRAV26-2A0A0B4J265 109 aa4.48□□□□□ -1.69
SDCBP-208ENST00000520228 IFITM2Q01629 132 aa4.48□□□□□ -1.69
SDCBP-208ENST00000520228 GATD1Q8NB37 220 aa4.48□□□□□ -1.69
SDCBP-208ENST00000520228 FRZBQ92765 325 aa4.48□□□□□ -1.69
SDCBP-208ENST00000520228 NAT8BQ9UHF3 227 aa4.48□□□□□ -1.69
SDCBP-208ENST00000520228 NACAE9PAV3 2078 aa4.48□□□□□ -1.69
SDCBP-208ENST00000520228 DNAH17Q9UFH2 4485 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 TRBV25-1A0A075B6N4 114 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 TRAV8-3A0A0A6YYJ7 113 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 C16orf90A8MZG2 172 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 PSCAO43653 123 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 PKIAP61925 76 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 LAGE3Q14657 143 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 ELOBQ15370 118 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 NTM-AS1Q6ZSK4 140 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 SPATA12Q7Z6I5 190 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 NUP35Q8NFH5 326 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 CHCHD7Q9BUK0 85 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 TMEM191AQ9H0A3 160 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 KLK12Q9UKR0 248 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 RYR1P21817 5038 aa4.47□□□□□ -1.69
SDCBP-208ENST00000520228 A0A087WTM6 91 aa4.46□□□□□ -1.7
SDCBP-208ENST00000520228 IGHV1-24A0A0C4DH33 117 aa4.46□□□□□ -1.7
SDCBP-208ENST00000520228 SMIM27A0A1W2PRY6 76 aa4.46□□□□□ -1.7
SDCBP-208ENST00000520228 IQCJQ1A5X6 159 aa4.46□□□□□ -1.7
SDCBP-208ENST00000520228 RPL39LQ96EH5 51 aaKnown RBP4.46□□□□□ -1.7
SDCBP-208ENST00000520228 TMEM243Q9BU79 118 aa4.46□□□□□ -1.7
SDCBP-208ENST00000520228 ANAPC11Q9NYG5 84 aa4.46□□□□□ -1.7
SDCBP-208ENST00000520228 A0A1B0GW15 77 aa4.45□□□□□ -1.7
SDCBP-208ENST00000520228 PPP1R2P9O14990 202 aa4.45□□□□□ -1.7
SDCBP-208ENST00000520228 MT-ND4LP03901 98 aa4.45□□□□□ -1.7
SDCBP-208ENST00000520228 ANGP03950 147 aaKnown RBP4.45□□□□□ -1.7
SDCBP-208ENST00000520228 RAB4AP20338 218 aa4.45□□□□□ -1.7
SDCBP-208ENST00000520228 RBX1P62877 108 aa4.45□□□□□ -1.7
SDCBP-208ENST00000520228 COTL1Q14019 142 aa4.45□□□□□ -1.7
SDCBP-208ENST00000520228 MPV17L2Q567V2 206 aa4.45□□□□□ -1.7
SDCBP-208ENST00000520228 UQCC3Q6UW78 93 aa4.45□□□□□ -1.7
SDCBP-208ENST00000520228 AMN1Q8IY45 258 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms