RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 FAM213BQ8TBF2 198 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 C18orf32Q8TCD1 76 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 NDUFA12Q9UI09 145 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 TARBP1Q13395 1621 aaKnown RBP1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 OTOGLQ3ZCN5 2332 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 MYO7BQ6PIF6 2116 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 CDK12Q9NYV4 1490 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 URB2Q14146 1524 aaKnown RBP1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 UNC13BO14795 1591 aa1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 SHROOM2Q13796 1616 aa1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 ADCYAP1P18509 176 aa1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 RBM3P98179 157 aaKnown RBP1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 SPATA45Q537H7 98 aa1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 NMSQ5H8A3 153 aa1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 NXT2Q9NPJ8 142 aaKnown RBP1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 SIPA1L3O60292 1781 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P46-201ENST00000520062 ABCA6Q8N139 1617 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 UNC13CQ8NB66 2214 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 MUC22E2RYF6 1773 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 TSC2P49815 1807 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 TRAV13-2A0A0B4J235 113 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 TRBV10-3A0A0K0K1G6 114 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 C7orf77A4D0Y5 90 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 CRYM-AS1A6NIL9 109 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 WFDC2Q14508 124 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 C9orf116Q5BN46 136 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 AMELYQ99218 206 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 GOLGA3Q08378 1498 aa1.55□□□□□ -2.16
HMGB1P46-201ENST00000520062 TRBV7-1A0A0A6YYK4 115 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 UMAD1C9J7I0 102 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 F2Z2F3 143 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 H3BUT2 72 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 SMIM13P0DJ93 91 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 KLKP1Q107X0 134 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 CYP2G1PQ6ZSU1 146 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 LINC00643Q86TS7 51 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 EDC4Q6P2E9 1401 aaKnown RBP1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 PLXNC1O60486 1568 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 PLCH1Q4KWH8 1693 aa1.54□□□□□ -2.16
HMGB1P46-201ENST00000520062 TRAV23DV6A0A075B6W5 121 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 JMJD7-PLA2G4BH0Y9G9 81 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 TECTAO75443 2155 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 SIX6O95475 246 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 ZNF142P52746 1687 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 S100A7L2Q5SY68 101 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 TMEM170BQ5T4T1 132 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 CFAP126Q5VTH2 177 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 FAM167A-AS1Q96KT0 104 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 LIMD2Q9BT23 127 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 SYCP2Q9BX26 1530 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 DYNLRB1Q9NP97 96 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 PRO1854Q9UHT4 67 aa1.53□□□□□ -2.16
HMGB1P46-201ENST00000520062 ABCA4P78363 2273 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 SIP14410 1827 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 XRN1Q8IZH2 1706 aaKnown RBP1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 KIF1AQ12756 1690 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 LRP5O75197 1615 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 MADDQ8WXG6 1647 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 HCG22E2RYF7 251 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 H7BZZ5 65 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 PPYP01298 95 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 COX6CP09669 75 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 ZNF818PQ6ZRF7 136 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 ZCCHC23Q6ZST2 131 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 SMIM5Q71RC9 77 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 VMO1Q7Z5L0 202 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 DNAJC13O75165 2243 aa1.52□□□□□ -2.17
HMGB1P46-201ENST00000520062 PREX1Q8TCU6 1659 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 PIK3C2BO00750 1634 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 RAPGEF6Q8TEU7 1601 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 RNF17Q9BXT8 1623 aaKnown RBP1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 DIP2CQ9Y2E4 1556 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 TRBV7-3A0A075B6L6 115 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 TMEM30CPA0ZSE6 113 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 UBE2D3P61077 147 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 UBE2D2P62837 147 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 XAF1Q6GPH4 301 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 HIGD1BQ9P298 99 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 LINC00474Q9P2X8 69 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 UBR3Q6ZT12 1888 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 ARFGEF1Q9Y6D6 1849 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 COL4A6Q14031 1691 aa1.51□□□□□ -2.17
HMGB1P46-201ENST00000520062 CLASP1Q7Z460 1538 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 NKTRP30414 1462 aaKnown RBP1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 COL14A1Q05707 1796 aaKnown RBP1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 TRBV25-1A0A075B6N4 114 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 A0A0J9YY99 117 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 TRBV10-1A0A0K0K1A3 114 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 CXorf51AA0A1B0GTR3 108 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 LOC285095A0A1B0GVY8 99 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 NCR3O14931 201 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 SFTA3P0C7M3 94 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 DEFB121Q5J5C9 76 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 LYPD5Q6UWN5 251 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 Q8N6K4 173 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 WFDC10AQ9H1F0 79 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 MANBALQ9NQG1 85 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 NCOA6Q14686 2063 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 PTPRMP28827 1452 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms