RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 DDTP30046 118 aa10.5□□□□□ -0.73
TRAPPC9-205ENST00000518839 OR5A1Q8NGJ0 315 aa10.5□□□□□ -0.73
TRAPPC9-205ENST00000518839 OPRPNQ99935 248 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC9-205ENST00000518839 MIEN1Q9BRT3 115 aa10.5□□□□□ -0.73
TRAPPC9-205ENST00000518839 ZC2HC1BQ5TFG8 222 aa10.49□□□□□ -0.73
TRAPPC9-205ENST00000518839 Q6ZTC4 211 aa10.49□□□□□ -0.73
TRAPPC9-205ENST00000518839 Q6ZUT4 128 aa10.49□□□□□ -0.73
TRAPPC9-205ENST00000518839 NFE4Q86UQ8 179 aa10.49□□□□□ -0.73
TRAPPC9-205ENST00000518839 B9D2Q9BPU9 175 aa10.49□□□□□ -0.73
TRAPPC9-205ENST00000518839 CHCHD5Q9BSY4 110 aa10.49□□□□□ -0.73
TRAPPC9-205ENST00000518839 NBEAL2Q6ZNJ1 2754 aa10.48□□□□□ -0.73
TRAPPC9-205ENST00000518839 IGLV4-69A0A075B6H9 119 aa10.48□□□□□ -0.73
TRAPPC9-205ENST00000518839 HERVK_113P61574 105 aa10.48□□□□□ -0.73
TRAPPC9-205ENST00000518839 CEMP1Q6PRD7 247 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC9-205ENST00000518839 STPG4Q8N801 248 aa10.48□□□□□ -0.73
TRAPPC9-205ENST00000518839 TIRAPP58753 221 aa10.47□□□□□ -0.73
TRAPPC9-205ENST00000518839 NANOS2P60321 138 aaKnown RBP10.47□□□□□ -0.73
TRAPPC9-205ENST00000518839 ANKRD39Q53RE8 183 aa10.47□□□□□ -0.73
TRAPPC9-205ENST00000518839 FAM104AQ969W3 186 aa10.47□□□□□ -0.73
TRAPPC9-205ENST00000518839 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
TRAPPC9-205ENST00000518839 MGAM2Q2M2H8 2515 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 DEFB131BA0A096LNP1 70 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 A0A096LPF7 62 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 TRAV10A0A0B4J240 114 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 C11orf86A6NJI1 115 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 COX8AP10176 69 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 SEC11AP67812 179 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 GAGE6Q13070 117 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 SLC25A34Q6PIV7 304 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 CHAC1Q9BUX1 264 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 CDC42SE2Q9NRR3 84 aa10.46□□□□□ -0.73
TRAPPC9-205ENST00000518839 TINCRA0A1B0GVN0 87 aa10.45□□□□□ -0.74
TRAPPC9-205ENST00000518839 C14orf144Q96I85 54 aa10.45□□□□□ -0.74
TRAPPC9-205ENST00000518839 A0A1B0GUV1 79 aa10.44□□□□□ -0.74
TRAPPC9-205ENST00000518839 DLEU1O43261 78 aa10.44□□□□□ -0.74
TRAPPC9-205ENST00000518839 NHLRC4P0CG21 123 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-205ENST00000518839 LELP1Q5T871 98 aa10.44□□□□□ -0.74
TRAPPC9-205ENST00000518839 FAM19A3Q7Z5A8 133 aa10.44□□□□□ -0.74
TRAPPC9-205ENST00000518839 A0A0J9YXV3 536 aa10.43□□□□□ -0.74
TRAPPC9-205ENST00000518839 E9PLD3 99 aa10.43□□□□□ -0.74
TRAPPC9-205ENST00000518839 NMUP48645 174 aa10.43□□□□□ -0.74
TRAPPC9-205ENST00000518839 UBE2D1P51668 147 aa10.43□□□□□ -0.74
TRAPPC9-205ENST00000518839 RNASE13Q5GAN3 156 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-205ENST00000518839 TMEM170BQ5T4T1 132 aa10.43□□□□□ -0.74
TRAPPC9-205ENST00000518839 TMEM262E9PQX1 116 aa10.42□□□□□ -0.74
TRAPPC9-205ENST00000518839 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-205ENST00000518839 GEMIN7Q9H840 131 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-205ENST00000518839 LINC00587B1AMM8 73 aa10.41□□□□□ -0.74
TRAPPC9-205ENST00000518839 ZNF22P17026 224 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC9-205ENST00000518839 HERVK_113P63121 156 aa10.41□□□□□ -0.74
TRAPPC9-205ENST00000518839 BOD1L2Q8IYS8 172 aa10.41□□□□□ -0.74
TRAPPC9-205ENST00000518839 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
TRAPPC9-205ENST00000518839 NBEAL1Q6ZS30 2694 aa10.41□□□□□ -0.74
TRAPPC9-205ENST00000518839 TRAV8-6A0A0B4J262 113 aa10.4□□□□□ -0.74
TRAPPC9-205ENST00000518839 H3BRM9 83 aa10.4□□□□□ -0.74
TRAPPC9-205ENST00000518839 DEFA6Q01524 100 aa10.4□□□□□ -0.74
TRAPPC9-205ENST00000518839 LYPD5Q6UWN5 251 aa10.4□□□□□ -0.74
TRAPPC9-205ENST00000518839 IGKV2D-26A0A0A0MRZ7 120 aa10.39□□□□□ -0.75
TRAPPC9-205ENST00000518839 TMEM223A0PJW6 202 aa10.39□□□□□ -0.75
TRAPPC9-205ENST00000518839 SIVA1O15304 175 aa10.39□□□□□ -0.75
TRAPPC9-205ENST00000518839 RBX1P62877 108 aa10.39□□□□□ -0.75
TRAPPC9-205ENST00000518839 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
TRAPPC9-205ENST00000518839 IGLV4-60A0A075B6I1 120 aa10.38□□□□□ -0.75
TRAPPC9-205ENST00000518839 IGLV5-45A0A087WSX0 123 aa10.38□□□□□ -0.75
TRAPPC9-205ENST00000518839 CCL25O15444 150 aa10.38□□□□□ -0.75
TRAPPC9-205ENST00000518839 MPV17L2Q567V2 206 aa10.38□□□□□ -0.75
TRAPPC9-205ENST00000518839 TRAV13-1A0A0B4J241 112 aa10.37□□□□□ -0.75
TRAPPC9-205ENST00000518839 TCTAP57738 103 aa10.37□□□□□ -0.75
TRAPPC9-205ENST00000518839 LINC00242Q5T6M2 205 aa10.37□□□□□ -0.75
TRAPPC9-205ENST00000518839 LINC00469Q8N7U9 141 aa10.37□□□□□ -0.75
TRAPPC9-205ENST00000518839 PLEKHB2Q96CS7 222 aa10.37□□□□□ -0.75
TRAPPC9-205ENST00000518839 LEPROTO15243 131 aa10.36□□□□□ -0.75
TRAPPC9-205ENST00000518839 PCP2Q8IVA1 136 aa10.36□□□□□ -0.75
TRAPPC9-205ENST00000518839 SS18Q15532 418 aa10.35□□□□□ -0.75
TRAPPC9-205ENST00000518839 IGHV1-58A0A0C4DH39 117 aa10.34□□□□□ -0.75
TRAPPC9-205ENST00000518839 LGALS3P17931 250 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-205ENST00000518839 CTAG1AP78358 180 aa10.34□□□□□ -0.75
TRAPPC9-205ENST00000518839 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
TRAPPC9-205ENST00000518839 TENM3Q9P273 2699 aa10.34□□□□□ -0.75
TRAPPC9-205ENST00000518839 MYMXA0A1B0GTQ4 84 aa10.33□□□□□ -0.76
TRAPPC9-205ENST00000518839 LINC00959A0A1B0GUT2 108 aa10.33□□□□□ -0.76
TRAPPC9-205ENST00000518839 J3QQQ9 107 aa10.33□□□□□ -0.76
TRAPPC9-205ENST00000518839 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
TRAPPC9-205ENST00000518839 CDKN2A-AS1Q9UH64 79 aa10.33□□□□□ -0.76
TRAPPC9-205ENST00000518839 M0R143 59 aa10.32□□□□□ -0.76
TRAPPC9-205ENST00000518839 COX6A2Q02221 97 aa10.32□□□□□ -0.76
TRAPPC9-205ENST00000518839 ESRGQ1W209 222 aa10.32□□□□□ -0.76
TRAPPC9-205ENST00000518839 C2orf91Q6ZV80 131 aa10.32□□□□□ -0.76
TRAPPC9-205ENST00000518839 IGKV3OR2-268A0A0C4DH90 116 aa10.31□□□□□ -0.76
TRAPPC9-205ENST00000518839 ZNF815PA8K554 130 aa10.31□□□□□ -0.76
TRAPPC9-205ENST00000518839 MAPKAPK5-AS1Q8N8E1 139 aa10.31□□□□□ -0.76
TRAPPC9-205ENST00000518839 SPINK8P0C7L1 97 aa10.3□□□□□ -0.76
TRAPPC9-205ENST00000518839 IGHV3-30-3P0DP02 117 aa10.3□□□□□ -0.76
TRAPPC9-205ENST00000518839 REG3AQ06141 175 aa10.3□□□□□ -0.76
TRAPPC9-205ENST00000518839 LINC00269Q8N2A0 174 aa10.3□□□□□ -0.76
TRAPPC9-205ENST00000518839 TTTY13Q9BZ97 58 aa10.3□□□□□ -0.76
TRAPPC9-205ENST00000518839 TP73-AS1Q9UF72 201 aa10.3□□□□□ -0.76
TRAPPC9-205ENST00000518839 LBHQ53QV2 105 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC9-205ENST00000518839 LINC01561Q8N1V8 128 aa10.29□□□□□ -0.76
TRAPPC9-205ENST00000518839 IGHV3-64A0A075B6Q5 118 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms