RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 NFE4Q86UQ8 179 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 LINC00269Q8N2A0 174 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 UBE2WQ96B02 151 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 SPANXA1Q9NS26 97 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 AP5S1Q9NUS5 200 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 CYSLTR1Q9Y271 337 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 CRPP02741 224 aa11.89□□□□□ -0.51
TRAM1-202ENST00000518678 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
TRAM1-202ENST00000518678 Q9HAA7 133 aa11.89□□□□□ -0.51
TRAM1-202ENST00000518678 CDC42SE2Q9NRR3 84 aa11.89□□□□□ -0.51
TRAM1-202ENST00000518678 REG3AQ06141 175 aa11.88□□□□□ -0.51
TRAM1-202ENST00000518678 ZNF664Q8N3J9 261 aa11.88□□□□□ -0.51
TRAM1-202ENST00000518678 TOMM6Q96B49 74 aa11.88□□□□□ -0.51
TRAM1-202ENST00000518678 PYGO1Q9Y3Y4 419 aa11.88□□□□□ -0.51
TRAM1-202ENST00000518678 CLPSL2Q6UWE3 100 aa11.87□□□□□ -0.51
TRAM1-202ENST00000518678 BAGE3Q86Y29 109 aa11.87□□□□□ -0.51
TRAM1-202ENST00000518678 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
TRAM1-202ENST00000518678 PKHD1P08F94 4074 aa11.87□□□□□ -0.51
TRAM1-202ENST00000518678 RTL8CO15255 209 aa11.86□□□□□ -0.51
TRAM1-202ENST00000518678 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
TRAM1-202ENST00000518678 MIAQ16674 131 aa11.86□□□□□ -0.51
TRAM1-202ENST00000518678 Q6ZRN7 208 aaPredicted RBP11.86□□□□□ -0.51
TRAM1-202ENST00000518678 Q6ZUT4 128 aa11.86□□□□□ -0.51
TRAM1-202ENST00000518678 LINC01549A6NIU2 74 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST1H2BKO60814 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST1H2BJP06899 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST1H2BOP23527 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST1H2BBP33778 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST1H2BDP58876 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST1H2BCP62807 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST2H2BEQ16778 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST1H2BHQ93079 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 FAM104AQ969W3 186 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 RMI2Q96E14 147 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST1H2BNQ99877 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 HIST1H2BMQ99879 126 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 DNAH11Q96DT5 4516 aa11.85□□□□□ -0.51
TRAM1-202ENST00000518678 A0A096LNJ9 63 aa11.84□□□□□ -0.51
TRAM1-202ENST00000518678 IGIPA6NJ69 53 aa11.84□□□□□ -0.51
TRAM1-202ENST00000518678 NPSP0C0P6 89 aa11.84□□□□□ -0.51
TRAM1-202ENST00000518678 OPRPNQ99935 248 aaPredicted RBP11.84□□□□□ -0.51
TRAM1-202ENST00000518678 TM2D2Q9BX73 214 aa11.84□□□□□ -0.51
TRAM1-202ENST00000518678 IGLV4-3A0A075B6K6 122 aa11.83□□□□□ -0.52
TRAM1-202ENST00000518678 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.52
TRAM1-202ENST00000518678 TRAV8-4A0A0B4J246 113 aa11.83□□□□□ -0.52
TRAM1-202ENST00000518678 RNASE13Q5GAN3 156 aaKnown RBP11.83□□□□□ -0.52
TRAM1-202ENST00000518678 C1orf43Q9BWL3 253 aa11.83□□□□□ -0.52
TRAM1-202ENST00000518678 COX11Q9Y6N1 276 aa11.83□□□□□ -0.52
TRAM1-202ENST00000518678 IGKV3OR2-268A0A0C4DH90 116 aa11.82□□□□□ -0.52
TRAM1-202ENST00000518678 C1orf196B1AJZ1 125 aa11.82□□□□□ -0.52
TRAM1-202ENST00000518678 HBDP02042 147 aa11.82□□□□□ -0.52
TRAM1-202ENST00000518678 LINC00310P59036 64 aa11.82□□□□□ -0.52
TRAM1-202ENST00000518678 ERASQ7Z444 233 aa11.82□□□□□ -0.52
TRAM1-202ENST00000518678 SCGB3A1Q96QR1 104 aa11.82□□□□□ -0.52
TRAM1-202ENST00000518678 TIMM17AQ99595 171 aa11.82□□□□□ -0.52
TRAM1-202ENST00000518678 SERF1AO75920 110 aa11.81□□□□□ -0.52
TRAM1-202ENST00000518678 PMCHL1Q16048 86 aa11.81□□□□□ -0.52
TRAM1-202ENST00000518678 TMEM141Q96I45 108 aa11.81□□□□□ -0.52
TRAM1-202ENST00000518678 IGLV10-54A0A075B6I4 117 aa11.8□□□□□ -0.52
TRAM1-202ENST00000518678 LINC00959A0A1B0GUT2 108 aa11.8□□□□□ -0.52
TRAM1-202ENST00000518678 HSBP1O75506 76 aa11.8□□□□□ -0.52
TRAM1-202ENST00000518678 PDZD11Q5EBL8 140 aa11.8□□□□□ -0.52
TRAM1-202ENST00000518678 LINC00336Q6ZUF6 198 aa11.8□□□□□ -0.52
TRAM1-202ENST00000518678 PSCAO43653 123 aa11.79□□□□□ -0.52
TRAM1-202ENST00000518678 PAPPA-AS1Q5QFB9 102 aa11.79□□□□□ -0.52
TRAM1-202ENST00000518678 KRTAP26-1Q6PEX3 210 aa11.79□□□□□ -0.52
TRAM1-202ENST00000518678 NUPR1O60356 82 aa11.78□□□□□ -0.52
TRAM1-202ENST00000518678 SS18Q15532 418 aa11.78□□□□□ -0.52
TRAM1-202ENST00000518678 Q6ZN92 141 aa11.78□□□□□ -0.52
TRAM1-202ENST00000518678 TEX43Q6ZNM6 134 aa11.78□□□□□ -0.52
TRAM1-202ENST00000518678 AMELXQ99217 191 aa11.78□□□□□ -0.52
TRAM1-202ENST00000518678 IFITM10A6NMD0 228 aa11.77□□□□□ -0.53
TRAM1-202ENST00000518678 CCL25O15444 150 aa11.77□□□□□ -0.53
TRAM1-202ENST00000518678 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
TRAM1-202ENST00000518678 MAPKAPK5-AS1Q8N8E1 139 aa11.77□□□□□ -0.53
TRAM1-202ENST00000518678 CHCHD10Q8WYQ3 142 aaPredicted RBP11.77□□□□□ -0.53
TRAM1-202ENST00000518678 KRTAP17-1Q9BYP8 105 aa11.77□□□□□ -0.53
TRAM1-202ENST00000518678 VCX2Q9H322 139 aa11.77□□□□□ -0.53
TRAM1-202ENST00000518678 TRAV13-1A0A0B4J241 112 aa11.76□□□□□ -0.53
TRAM1-202ENST00000518678 PRSS29PA6NIE9 313 aa11.76□□□□□ -0.53
TRAM1-202ENST00000518678 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.76□□□□□ -0.53
TRAM1-202ENST00000518678 TNP2Q05952 138 aa11.76□□□□□ -0.53
TRAM1-202ENST00000518678 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
TRAM1-202ENST00000518678 A0A1B0GVY2 172 aa11.75□□□□□ -0.53
TRAM1-202ENST00000518678 COA6Q5JTJ3 125 aaKnown RBP11.75□□□□□ -0.53
TRAM1-202ENST00000518678 ZC2HC1BQ5TFG8 222 aa11.75□□□□□ -0.53
TRAM1-202ENST00000518678 C2orf88Q9BSF0 95 aa11.75□□□□□ -0.53
TRAM1-202ENST00000518678 GAGE12HA6NDE8 117 aa11.74□□□□□ -0.53
TRAM1-202ENST00000518678 ATP5LO75964 103 aa11.74□□□□□ -0.53
TRAM1-202ENST00000518678 LRCOL1A6NCL2 159 aa11.73□□□□□ -0.53
TRAM1-202ENST00000518678 XCL1P47992 114 aa11.73□□□□□ -0.53
TRAM1-202ENST00000518678 UBE2D1P51668 147 aa11.73□□□□□ -0.53
TRAM1-202ENST00000518678 NDUFA6P56556 154 aa11.73□□□□□ -0.53
TRAM1-202ENST00000518678 CD164L2Q6UWJ8 174 aa11.73□□□□□ -0.53
TRAM1-202ENST00000518678 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
TRAM1-202ENST00000518678 A0A087WTM6 91 aa11.72□□□□□ -0.53
TRAM1-202ENST00000518678 FOXI1Q12951 378 aa11.72□□□□□ -0.53
TRAM1-202ENST00000518678 PCLOQ9Y6V0 5065 aa11.71□□□□□ -0.53
TRAM1-202ENST00000518678 CST9LQ9H4G1 147 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms