RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CCL17Q92583 94 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 TNCP24821 2201 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV1-3A0A0C4DH29 117 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGLV5-39A0A0G2JS06 123 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 A0A1B0GW54 56 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 HCG22E2RYF7 251 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 CHKB-CPT1BH3BT56 60 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 LECT2O14960 151 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 SPRY3O43610 288 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV3-9P01782 118 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 CCL3P10147 92 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 DEFB114Q30KQ6 69 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 C10orf55Q5SWW7 151 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 C10orf25Q5T742 122 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 ZNRF1Q8ND25 227 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 LEAP2Q969E1 77 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 FAM218AQ96MZ4 157 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q9H8V8 135 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 PDE4DIPQ5VU43 2346 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 TRAV10A0A0B4J240 114 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 A6NN06 94 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 PSCAO43653 123 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 PRM2P04554 102 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 LINC00315P59091 139 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 NDPQ00604 133 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 C9orf66Q5T8R8 295 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q6ZS52 159 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q6ZSV7 163 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 C1orf64Q8NEQ6 169 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 SPTSSBQ8NFR3 76 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 SMIM11BQ8TCY0 68 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 SND1-IT1Q9HBX3 110 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 ARFGEF3Q5TH69 2177 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 PI4KAP42356 2102 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 SEC16AO15027 2179 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV1OR15-1A0A075B7D0 117 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV3-21A0A0B4J1V1 117 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 M0QY20 66 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 PSPHP1O15172 72 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 GNRH2O43555 120 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 LY6HO94772 140 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 LINC01554Q52M75 96 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q6ZQT0 140 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q75L30 129 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q8N814 137 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 WFDC9Q8NEX5 89 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGLV11-55A0A075B6I3 123 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 A0A087WYN8 130 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 TRBV10-1A0A0K0K1A3 114 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 C16orf90A8MZG2 172 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 C19orf84I3L1E1 186 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGKV3-15P01624 115 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 MRGPRG-AS1Q2M3A8 158 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 C9orf116Q5BN46 136 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 NTM-AS1Q6ZSK4 140 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 GAFA1Q96PS6 74 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 OCR1Q9BZK8 76 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 CELA1Q9UNI1 258 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 LY6G6EA0A0G2JKS1 128 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 LOC101927531A0A1B0GV80 90 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGKV2-29A2NJV5 120 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 A6NED7 52 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 PRAC2D3DTV9 90 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 C5orf67F2Z3F1 127 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 H3BPC8 53 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 LY6G6DO95868 133 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 RNASE3P12724 160 aaKnown RBP3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q5VV11 94 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 ZFAND2AQ8N6M9 145 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 SPANXA2-OT1Q8N9U9 137 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q9BRP9 147 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 ARHGAP32A7KAX9 2087 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV3-64DA0A0J9YX35 117 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 LCE6AA0A183 80 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 TRBV6-4A0A1B0GX49 114 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 KLK9Q2XQG4 91 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 CASC2Q6XLA1 102 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 NPBQ8NG41 125 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 MUC7Q8TAX7 377 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 CDKN2A-AS1Q9UH64 79 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 KLK9Q9UKQ9 250 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 C10orf142B7Z368 130 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 H0Y9J4 135 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 C3orf84H3BNL1 204 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 PLXNB1O43157 2135 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGLV1-44P01699 117 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV4-38-2P0DP08 117 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 LINC00158P58513 81 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 SCXQ7RTU7 201 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 ITLN2Q8WWU7 325 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 MALRD1Q5VYJ5 2156 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 DOCK10Q96BY6 2186 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 K7EQD1 137 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV1-8P0DP01 117 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 C9orf129Q5T035 196 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms