RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CCL17Q92583 94 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 TNCP24821 2201 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV1-3A0A0C4DH29 117 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGLV5-39A0A0G2JS06 123 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 A0A1B0GW54 56 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 HCG22E2RYF7 251 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 CHKB-CPT1BH3BT56 60 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 LECT2O14960 151 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 SPRY3O43610 288 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV3-9P01782 118 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 CCL3P10147 92 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 DEFB114Q30KQ6 69 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 C10orf55Q5SWW7 151 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 C10orf25Q5T742 122 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 ZNRF1Q8ND25 227 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 LEAP2Q969E1 77 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 FAM218AQ96MZ4 157 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q9H8V8 135 aa3.39□□□□□ -1.87
HMGB1P19-201ENST00000517578 PDE4DIPQ5VU43 2346 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 TRAV10A0A0B4J240 114 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 A6NN06 94 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 PSCAO43653 123 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 PRM2P04554 102 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 LINC00315P59091 139 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 NDPQ00604 133 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 C9orf66Q5T8R8 295 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q6ZS52 159 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q6ZSV7 163 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 C1orf64Q8NEQ6 169 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 SPTSSBQ8NFR3 76 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 SMIM11BQ8TCY0 68 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 SND1-IT1Q9HBX3 110 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 ARFGEF3Q5TH69 2177 aa3.38□□□□□ -1.87
HMGB1P19-201ENST00000517578 PI4KAP42356 2102 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 SEC16AO15027 2179 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV1OR15-1A0A075B7D0 117 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV3-21A0A0B4J1V1 117 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 M0QY20 66 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 PSPHP1O15172 72 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 GNRH2O43555 120 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 LY6HO94772 140 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 LINC01554Q52M75 96 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q6ZQT0 140 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q75L30 129 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q8N814 137 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 WFDC9Q8NEX5 89 aa3.37□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGLV11-55A0A075B6I3 123 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 A0A087WYN8 130 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 TRBV10-1A0A0K0K1A3 114 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 C16orf90A8MZG2 172 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 C19orf84I3L1E1 186 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGKV3-15P01624 115 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 MRGPRG-AS1Q2M3A8 158 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 C9orf116Q5BN46 136 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 NTM-AS1Q6ZSK4 140 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 GAFA1Q96PS6 74 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 OCR1Q9BZK8 76 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 CELA1Q9UNI1 258 aa3.36□□□□□ -1.87
HMGB1P19-201ENST00000517578 LY6G6EA0A0G2JKS1 128 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 LOC101927531A0A1B0GV80 90 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGKV2-29A2NJV5 120 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 A6NED7 52 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 PRAC2D3DTV9 90 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 C5orf67F2Z3F1 127 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 H3BPC8 53 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 LY6G6DO95868 133 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 RNASE3P12724 160 aaKnown RBP3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q5VV11 94 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 ZFAND2AQ8N6M9 145 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 SPANXA2-OT1Q8N9U9 137 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q9BRP9 147 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 ARHGAP32A7KAX9 2087 aa3.35□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV3-64DA0A0J9YX35 117 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 LCE6AA0A183 80 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 TRBV6-4A0A1B0GX49 114 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 KLK9Q2XQG4 91 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 CASC2Q6XLA1 102 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 NPBQ8NG41 125 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 MUC7Q8TAX7 377 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 CDKN2A-AS1Q9UH64 79 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 KLK9Q9UKQ9 250 aa3.34□□□□□ -1.87
HMGB1P19-201ENST00000517578 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 C10orf142B7Z368 130 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 H0Y9J4 135 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 C3orf84H3BNL1 204 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 PLXNB1O43157 2135 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGLV1-44P01699 117 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV4-38-2P0DP08 117 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 LINC00158P58513 81 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 SCXQ7RTU7 201 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 ITLN2Q8WWU7 325 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 MALRD1Q5VYJ5 2156 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 DOCK10Q96BY6 2186 aa3.33□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 K7EQD1 137 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV1-8P0DP01 117 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 C9orf129Q5T035 196 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms