RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DOCK11Q5JSL3 2073 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 MED13Q9UHV7 2174 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 LOC110117498A0A087WWA1 95 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 ZNF815PA8K554 130 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 F2Z2F3 143 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 J3QRE1 110 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 EFNA4P52798 201 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 GDF5OSQ5U4N7 250 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 BRD3OSQ6XYD6 125 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 DEFB132Q7Z7B7 95 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 RGPD2P0DJD1 1756 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 ARFGEF2Q9Y6D5 1785 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 IFT172Q9UG01 1749 aa1.94□□□□□ -2.1
RNU4-60P-201ENST00000517239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 F8WEM9 126 aa1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 BCE1O60756 84 aa1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 CFDP00746 253 aaPredicted RBP1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 CCL18P55774 89 aa1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 Q5BKY6 102 aa1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 R4GMQ9 66 aa1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 ZNF236Q9UL36 1845 aa1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 INO80Q9ULG1 1556 aaPredicted RBP1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 KDM3BQ7LBC6 1761 aa1.93□□□□□ -2.1
RNU4-60P-201ENST00000517239 MAGI3Q5TCQ9 1506 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 ABCC2Q92887 1545 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 A0A087WTM6 91 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 FAM223BA6NKX1 122 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 IGKV4-1P06312 121 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 KRTAP10-6P60371 365 aaPredicted RBP1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 KRTAP10-8P60410 259 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 CFAP126Q5VTH2 177 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 LINC00208Q96KT6 92 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 TMEM14BQ9NUH8 114 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 PRO0461Q9UI25 63 aa1.92□□□□□ -2.1
RNU4-60P-201ENST00000517239 ABCC1P33527 1531 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 KCPQ6ZWJ8 1503 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 NCOA2Q15596 1464 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 SPRR5A0A1B0GTR4 108 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 CTXND1A0A1B0GTU2 59 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 F8VRH5 84 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 SAA2P0DJI9 122 aaPredicted RBP1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 Q86TA4 180 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 LINC00643Q86TS7 51 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 OBSCN-AS1Q96MR7 158 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 TET1Q8NFU7 2136 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 NEXMIFQ5QGS0 1516 aa1.91□□□□□ -2.1
RNU4-60P-201ENST00000517239 PRRC2BQ5JSZ5 2229 aaKnown RBP1.9□□□□□ -2.1
RNU4-60P-201ENST00000517239 SPAG17Q6Q759 2223 aa1.9□□□□□ -2.1
RNU4-60P-201ENST00000517239 MYO7BQ6PIF6 2116 aa1.9□□□□□ -2.1
RNU4-60P-201ENST00000517239 KRTAP4-8A0A0G2JLE6 195 aa1.9□□□□□ -2.11
RNU4-60P-201ENST00000517239 C10orf142B7Z368 130 aa1.9□□□□□ -2.11
RNU4-60P-201ENST00000517239 HMGN2P05204 90 aaKnown RBP1.9□□□□□ -2.11
RNU4-60P-201ENST00000517239 ACYP1P07311 99 aa1.9□□□□□ -2.11
RNU4-60P-201ENST00000517239 PRR15LQ9BU68 103 aa1.9□□□□□ -2.11
RNU4-60P-201ENST00000517239 NOTCH3Q9UM47 2321 aa1.9□□□□□ -2.11
RNU4-60P-201ENST00000517239 THOC2Q8NI27 1593 aaKnown RBP1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 LRRC9Q6ZRR7 1453 aa1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 CRYBG1Q9Y4K1 1723 aa1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 M0R135 149 aa1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 PRB2P02812 416 aaPredicted RBP1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 Q6ZQY7 126 aa1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 ZNF563Q8TA94 476 aa1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 AMELXQ99217 191 aa1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 PSENENQ9NZ42 101 aa1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 ABCA4P78363 2273 aa1.89□□□□□ -2.11
RNU4-60P-201ENST00000517239 ITSN1Q15811 1721 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 MADDQ8WXG6 1647 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 ANKRD36A6QL64 1941 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 IQCF6A8MYZ5 107 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 M0R3E3 92 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 CAV3P56539 151 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 DEFB103AP81534 67 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 PP632Q6XCG6 107 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 BAGE3Q86Y29 109 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 BAGE2Q86Y30 109 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 C18orf32Q8TCD1 76 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 CCL19Q99731 98 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 KRTAP4-11Q9BYQ6 195 aa1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 MAP2P11137 1827 aaKnown RBP1.88□□□□□ -2.11
RNU4-60P-201ENST00000517239 ICE1Q9Y2F5 2266 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 TRAV1-2A0A0B4J238 106 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 A0A1B0GWA3 101 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 UQCR11O14957 56 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 ARMS2P0C7Q2 107 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 SPINT3P49223 89 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 PKD1L3Q7Z443 1732 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 FDCSPQ8NFU4 85 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 LINC01600Q96MT4 127 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 WFDC6Q9BQY6 131 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 KRTAP4-9Q9BYQ8 210 aa1.87□□□□□ -2.11
RNU4-60P-201ENST00000517239 C5P01031 1676 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 INTS1Q8N201 2190 aaKnown RBP1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 RGPD1P0DJD0 1748 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 SETBP1Q9Y6X0 1596 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 TRGV1A0A0A0MS02 117 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 MYMXA0A1B0GTQ4 84 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 C7orf77A4D0Y5 90 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 LEPROTL1O95214 131 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 ACYP2P14621 99 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms