RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 RYR2Q92736 4967 aa-2.64□□□□□ -2.83
SNORA40.14-201ENST00000516543 SYS1-DBNDD2H3BUS1 97 aa-2.64□□□□□ -2.83
SNORA40.14-201ENST00000516543 NCR2O95944 276 aa-2.64□□□□□ -2.83
SNORA40.14-201ENST00000516543 MAFIPQ8WZ33 124 aa-2.64□□□□□ -2.83
SNORA40.14-201ENST00000516543 HIGD1AQ9Y241 93 aa-2.64□□□□□ -2.83
SNORA40.14-201ENST00000516543 TRAV36DV7A0A075B6V5 113 aa-2.65□□□□□ -2.83
SNORA40.14-201ENST00000516543 IL5P05113 134 aa-2.65□□□□□ -2.83
SNORA40.14-201ENST00000516543 RPS28P62857 69 aaKnown RBP-2.65□□□□□ -2.83
SNORA40.14-201ENST00000516543 TCTE3Q8IZS6 198 aa-2.65□□□□□ -2.83
SNORA40.14-201ENST00000516543 PRRC2CQ9Y520 2896 aaKnown RBP-2.65□□□□□ -2.83
SNORA40.14-201ENST00000516543 ADGRB1O14514 1584 aa-2.66□□□□□ -2.83
SNORA40.14-201ENST00000516543 SCTP09683 121 aa-2.66□□□□□ -2.84
SNORA40.14-201ENST00000516543 CMPK1P30085 196 aa-2.66□□□□□ -2.84
SNORA40.14-201ENST00000516543 Q6AWC8 147 aa-2.66□□□□□ -2.84
SNORA40.14-201ENST00000516543 DOCK2Q92608 1830 aa-2.66□□□□□ -2.84
SNORA40.14-201ENST00000516543 SAR1AQ9NR31 198 aa-2.67□□□□□ -2.84
SNORA40.14-201ENST00000516543 PAPPA2Q9BXP8 1791 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 FAM236AA0A1B0GUQ0 79 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 LINC00959A0A1B0GUT2 108 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 FAM236BA0A1B0GV22 79 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 SIX6O95475 246 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 PIPP12273 146 aaPredicted RBP-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 NCS1P62166 190 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 TFAMQ00059 246 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 C9orf62Q8N4C0 152 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 SEC11CQ9BY50 192 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 MRPL40Q9NQ50 206 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 PATJQ8NI35 1801 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 VPS13BQ7Z7G8 4022 aa-2.68□□□□□ -2.84
SNORA40.14-201ENST00000516543 BTAF1O14981 1849 aa-2.69□□□□□ -2.84
SNORA40.14-201ENST00000516543 TRBV7-4A0A0J9YYF1 115 aa-2.69□□□□□ -2.84
SNORA40.14-201ENST00000516543 CPSF4LA6NMK7 179 aaKnown RBP-2.69□□□□□ -2.84
SNORA40.14-201ENST00000516543 COX8AP10176 69 aa-2.69□□□□□ -2.84
SNORA40.14-201ENST00000516543 GNG10P50151 68 aa-2.69□□□□□ -2.84
SNORA40.14-201ENST00000516543 C10orf128Q5T292 105 aa-2.69□□□□□ -2.84
SNORA40.14-201ENST00000516543 BAGE2Q86Y30 109 aa-2.69□□□□□ -2.84
SNORA40.14-201ENST00000516543 LYSTQ99698 3801 aa-2.69□□□□□ -2.84
SNORA40.14-201ENST00000516543 LENEPQ9Y5L5 61 aa-2.69□□□□□ -2.84
SNORA40.14-201ENST00000516543 TMEM2Q9UHN6 1383 aa-2.7□□□□□ -2.84
SNORA40.14-201ENST00000516543 A0A1B0GX51 115 aa-2.7□□□□□ -2.84
SNORA40.14-201ENST00000516543 HCG22E2RYF7 251 aa-2.7□□□□□ -2.84
SNORA40.14-201ENST00000516543 IFNGP01579 166 aa-2.7□□□□□ -2.84
SNORA40.14-201ENST00000516543 CTAGE3PQ8IX95 158 aa-2.7□□□□□ -2.84
SNORA40.14-201ENST00000516543 NAA60Q9H7X0 242 aa-2.7□□□□□ -2.84
SNORA40.14-201ENST00000516543 UQCR11O14957 56 aa-2.71□□□□□ -2.84
SNORA40.14-201ENST00000516543 S100GP29377 79 aa-2.71□□□□□ -2.84
SNORA40.14-201ENST00000516543 RRAS2P62070 204 aaPredicted RBP-2.71□□□□□ -2.84
SNORA40.14-201ENST00000516543 Q6ZUT4 128 aa-2.71□□□□□ -2.84
SNORA40.14-201ENST00000516543 ARAP2Q8WZ64 1704 aa-2.71□□□□□ -2.84
SNORA40.14-201ENST00000516543 SPAARA0A1B0GVQ0 90 aa-2.72□□□□□ -2.84
SNORA40.14-201ENST00000516543 SNCGO76070 127 aa-2.72□□□□□ -2.84
SNORA40.14-201ENST00000516543 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.72□□□□□ -2.84
SNORA40.14-201ENST00000516543 SPTSSAQ969W0 71 aa-2.72□□□□□ -2.84
SNORA40.14-201ENST00000516543 SMPXQ9UHP9 88 aa-2.72□□□□□ -2.84
SNORA40.14-201ENST00000516543 COL4A6Q14031 1691 aa-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 RIMS1Q86UR5 1692 aaKnown RBP-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 AKAP13Q12802 2813 aa-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 NIPBLQ6KC79 2804 aaeCLIP-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 F8VRH5 84 aa-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 ZZEF1O43149 2961 aa-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 H1FX-AS1Q4G0G2 97 aa-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 PSMG3Q9BT73 122 aaPredicted RBP-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 LAMA3Q16787 3333 aa-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 DMXL1Q9Y485 3027 aa-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 IFT140Q96RY7 1462 aa-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 PBRM1Q86U86 1689 aa-2.73□□□□□ -2.85
SNORA40.14-201ENST00000516543 ADAMTS12P58397 1594 aa-2.74□□□□□ -2.85
SNORA40.14-201ENST00000516543 E5RI56 91 aa-2.74□□□□□ -2.85
SNORA40.14-201ENST00000516543 NDUFB6O95139 128 aa-2.74□□□□□ -2.85
SNORA40.14-201ENST00000516543 PLECQ15149 4684 aaKnown RBP-2.74□□□□□ -2.85
SNORA40.14-201ENST00000516543 SHANK2Q9UPX8 1470 aa-2.75□□□□□ -2.85
SNORA40.14-201ENST00000516543 A0A1B0GV72 72 aa-2.75□□□□□ -2.85
SNORA40.14-201ENST00000516543 APOC3P02656 99 aa-2.75□□□□□ -2.85
SNORA40.14-201ENST00000516543 TTC9CQ8N5M4 171 aa-2.75□□□□□ -2.85
SNORA40.14-201ENST00000516543 AQP10Q96PS8 301 aa-2.75□□□□□ -2.85
SNORA40.14-201ENST00000516543 RAPGEF6Q8TEU7 1601 aa-2.75□□□□□ -2.85
SNORA40.14-201ENST00000516543 PTPN23Q9H3S7 1636 aa-2.75□□□□□ -2.85
SNORA40.14-201ENST00000516543 RNF213Q63HN8 5207 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 SPEF2Q9C093 1822 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 TRAV13-2A0A0B4J235 113 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 IGLC7A0M8Q6 106 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 IGLC6P0CF74 106 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 TPPP2P59282 170 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 USMG5Q96IX5 58 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 LINC01558Q9Y6Z2 57 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 DNAH11Q96DT5 4516 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 ACACAQ13085 2346 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 MYOM3Q5VTT5 1437 aa-2.76□□□□□ -2.85
SNORA40.14-201ENST00000516543 ARPC5O15511 151 aa-2.77□□□□□ -2.85
SNORA40.14-201ENST00000516543 HIST1H1AQ02539 215 aaPredicted RBP-2.77□□□□□ -2.85
SNORA40.14-201ENST00000516543 ALX1Q15699 326 aa-2.77□□□□□ -2.85
SNORA40.14-201ENST00000516543 NDUFA4L2Q9NRX3 87 aa-2.77□□□□□ -2.85
SNORA40.14-201ENST00000516543 APOBP04114 4563 aaKnown RBP-2.77□□□□□ -2.85
SNORA40.14-201ENST00000516543 TROQ12816 1431 aaPredicted RBP-2.77□□□□□ -2.85
SNORA40.14-201ENST00000516543 SETBP1Q9Y6X0 1596 aa-2.78□□□□□ -2.85
SNORA40.14-201ENST00000516543 MMGT1Q8N4V1 131 aa-2.78□□□□□ -2.85
SNORA40.14-201ENST00000516543 CDC26Q8NHZ8 85 aa-2.78□□□□□ -2.85
SNORA40.14-201ENST00000516543 SKA2Q8WVK7 121 aaPredicted RBP-2.78□□□□□ -2.85
SNORA40.14-201ENST00000516543 DISP2A7MBM2 1401 aa-2.78□□□□□ -2.85
SNORA40.14-201ENST00000516543 SLIT1O75093 1534 aa-2.78□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms