RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 RREB1Q92766 1687 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PREX2Q70Z35 1606 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CCDC180Q9P1Z9 1646 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ALKQ9UM73 1620 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ARHGEF5Q12774 1597 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 EFCAB5A4FU69 1503 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 HMGXB3Q12766 1538 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 EDC4Q6P2E9 1401 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRBV7-3A0A075B6L6 115 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRBV6-8A0A0A6YYG3 113 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 A0A0G2JQZ4 141 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LOC285095A0A1B0GVY8 99 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 A0A1W2PPM0 123 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 F2Z2F3 143 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 JMJD7-PLA2G4BH0Y9G9 81 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 H7BZZ5 65 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 M0R2N4 97 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MRPS14O60783 128 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 APOC3P02656 99 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ACYP1P07311 99 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IGLC2P0DOY2 106 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IGLC3P0DOY3 106 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 RNASE3P12724 160 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PDE6GP18545 87 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 FAUP35544 74 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SMIM11AP58511 58 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SNRPFP62306 86 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 HMGN3Q15651 99 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TPRXLQ17RH7 258 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TDRG1Q3Y452 100 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 S100A7L2Q5SY68 101 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ALKAL2Q6UX46 152 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 DEFB132Q7Z7B7 95 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 Q8N6K4 173 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SPTSSBQ8NFR3 76 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 FAM213BQ8TBF2 198 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SPACA4Q8TDM5 124 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PPP1R1CQ8WVI7 109 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 S100ZQ8WXG8 99 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IFI27L1Q96BM0 104 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 NXT2Q9NPJ8 142 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MRPL36Q9P0J6 103 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LENEPQ9Y5L5 61 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SPCS1Q9Y6A9 102 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 INTS1Q8N201 2190 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MAP2P11137 1827 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TNRC6BQ9UPQ9 1833 aaKnown RBP0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SCN7AQ01118 1682 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SHPRHQ149N8 1683 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CFAP43Q8NDM7 1665 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CDK13Q14004 1512 aaKnown RBP0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 DUOX2Q9NRD8 1548 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CACNA1CQ13936 2221 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 HFM1A2PYH4 1435 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IGKV3-7A0A075B6H7 116 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRBV25-1A0A075B6N4 114 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LOC110117498A0A087WWA1 95 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRAV22A0A0B4J277 110 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRGV4A0A0C4DH28 118 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LOC101927531A0A1B0GV80 90 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TMEM14DPA8MWL7 114 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 H3BRN7 92 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 INE1O15225 51 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CFDP00746 253 aaPredicted RBP0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PPYP01298 95 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IGLV3-1P01715 115 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SAA2P0DJI9 122 aaPredicted RBP0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CCL3L1P16619 93 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 EDDM3BP56851 147 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SSBP1Q04837 148 aaKnown RBP0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ZNF56Q15929 161 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PMCHL1Q16048 86 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ETDBQ3ZM63 59 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 BVES-AS1Q5T3Y7 98 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TMEM170BQ5T4T1 132 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 Q5VV11 94 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CSAG1Q6PB30 78 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LINC00322Q6ZN03 302 aaPredicted RBP0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LINC00643Q86TS7 51 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 DYNLRB1Q9NP97 96 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MANBALQ9NQG1 85 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CDC42SE2Q9NRR3 84 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 NDUFA4L2Q9NRX3 87 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LINC00474Q9P2X8 69 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 KLK9Q9UKQ9 250 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 V9GYH0 126 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PKD1L3Q7Z443 1732 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CRYBG1Q9Y4K1 1723 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MED13LQ71F56 2210 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ASCC3Q8N3C0 2202 aaKnown RBP0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 RAPGEF6Q8TEU7 1601 aa0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CICQ96RK0 1608 aaPredicted RBP0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 NCOA6Q14686 2063 aaPredicted RBP0.49□□□□□ -2.33
SCARNA16.2-201ENST00000516520 URB2Q14146 1524 aaKnown RBP0.48□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MRC1P22897 1456 aa0.48□□□□□ -2.33
SCARNA16.2-201ENST00000516520 NKTRP30414 1462 aaKnown RBP0.48□□□□□ -2.33
SCARNA16.2-201ENST00000516520 DNAJC13O75165 2243 aa0.48□□□□□ -2.33
SCARNA16.2-201ENST00000516520 COL14A1Q05707 1796 aaKnown RBP0.48□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PARP4Q9UKK3 1724 aaKnown RBP0.48□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IGKV2-40A0A087WW87 121 aaPredicted RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms