RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 SPAG11BQ08648 103 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 SPAG11AQ6PDA7 123 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 SPACA4Q8TDM5 124 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 PI4KAP42356 2102 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 DNAL4O96015 105 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 IGLV3-1P01715 115 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 COX8AP10176 69 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 CCL3L1P16619 93 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 C10orf55Q5SWW7 151 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 FAM74A4Q5TZK3 123 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 MRC1P22897 1456 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 ESPL1Q14674 2120 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 MED12Q93074 2177 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 FAM223BA6NKX1 122 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 IGLV6-57P01721 117 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 KRTAP10-11P60412 298 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 COX7B2Q8TF08 81 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 PSENENQ9NZ42 101 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 KLK9Q9UKQ9 250 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 ARL2-SNX15V9GYD0 113 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 NKTRP30414 1462 aaKnown RBP3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 COL4A2P08572 1712 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 SPTBP11277 2137 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 TOP2AP11388 1531 aaKnown RBP3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 FXYD1O00168 92 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 GCHFRP30047 84 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 Q6JHZ5 121 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 SEC16AO15027 2179 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 PRXQ9BXM0 1461 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 ARMS2P0C7Q2 107 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 ATP5EP2Q5VTU8 51 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 PPP1R1CQ8WVI7 109 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 R4GMQ9 66 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 BAZ2BQ9UIF8 2168 aaKnown RBP3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 ANKRD36A6QL64 1941 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 NUP188Q5SRE5 1749 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CLASP1Q7Z460 1538 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 SYCP2Q9BX26 1530 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 BRWD1Q9NSI6 2320 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 LEPROTL1O95214 131 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 IGKV1-17P01599 117 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 KRTAP10-9P60411 292 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 TNRC6BQ9UPQ9 1833 aaKnown RBP3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 LAMC1P11047 1609 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 GAS8-AS1O95177 125 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 RNASE3P12724 160 aaKnown RBP3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 PKD1L3Q7Z443 1732 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 WFDC10AQ9H1F0 79 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CRYBG1Q9Y4K1 1723 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 SHROOM3Q8TF72 1996 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 SHPRHQ149N8 1683 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 ALKQ9UM73 1620 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 RALGAPBQ86X10 1494 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 GLI2P10070 1586 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 A0A1W2PNN7 141 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CCL18P55774 89 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 PRR15LQ9BU68 103 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CICQ96RK0 1608 aaPredicted RBP3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CDC42BPGQ6DT37 1551 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 IGKV3D-7A0A0C4DH55 119 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 IGKV3OR2-268A0A0C4DH90 116 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 LRCOL1A6NCL2 159 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 C10orf142B7Z368 130 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 D6R8Y8 96 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 F8VRH5 84 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 H3BRN7 92 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 RPL37AP61513 92 aaKnown RBP3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 DEFB132Q7Z7B7 95 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 MUSTN1Q8IVN3 82 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 TMEM14CQ9P0S9 112 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 COL5A1P20908 1838 aaPredicted RBP3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CEP170BQ9Y4F5 1589 aaPredicted RBP3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 WIZO95785 1651 aa3.71□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 UNC13CQ8NB66 2214 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 SPINT3P49223 89 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 MAST1Q9Y2H9 1570 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 SPAG17Q6Q759 2223 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 NHSQ6T4R5 1651 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 C3orf79P0CE67 100 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IFI27P40305 119 aaPredicted RBP3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PRR9Q5T870 116 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 ZNF563Q8TA94 476 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 HILPDAQ9Y5L2 63 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 V9GYV3 84 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 ALS2Q96Q42 1657 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 MYO7BQ6PIF6 2116 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PAPPAQ13219 1627 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 ARFGEF3Q5TH69 2177 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PCDH15Q96QU1 1955 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IGKV2-40A0A087WW87 121 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IGKV2D-40P01614 121 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 LINC00315P59091 139 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PROK2Q9HC23 129 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 UBE2D4Q9Y2X8 147 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IFT172Q9UG01 1749 aa3.68□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PARP4Q9UKK3 1724 aaKnown RBP3.68□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IGKV2-24A0A0C4DH68 120 aa3.68□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 TRBV6-5A0A0K0K1A5 114 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms