RNA–Protein interactions for RNA: ENST00000515442.1

RUFY3-214, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-214ENST00000515442 RBM3P98179 157 aaKnown RBP2.16□□□□□ -2.06
RUFY3-214ENST00000515442 GDF5OSQ5U4N7 250 aa2.16□□□□□ -2.06
RUFY3-214ENST00000515442 IFI27L1Q96BM0 104 aa2.16□□□□□ -2.06
RUFY3-214ENST00000515442 LIMD2Q9BT23 127 aa2.16□□□□□ -2.06
RUFY3-214ENST00000515442 Q9H521 79 aa2.16□□□□□ -2.06
RUFY3-214ENST00000515442 LRRC37AA6NMS7 1700 aa2.16□□□□□ -2.06
RUFY3-214ENST00000515442 ANK1P16157 1881 aa2.16□□□□□ -2.06
RUFY3-214ENST00000515442 TRAV23DV6A0A075B6W5 121 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 H3BQF6 201 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 HCRTO43612 131 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 SIX6O95475 246 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 DNAL4O96015 105 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 DEFB103AP81534 67 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 S100A7L2Q5SY68 101 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 UNQ6190/PRO20217Q6UXQ8 127 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 AMELYQ99218 206 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 WFDC10AQ9H1F0 79 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 EYSQ5T1H1 3165 aa2.15□□□□□ -2.07
RUFY3-214ENST00000515442 BAZ2BQ9UIF8 2168 aaKnown RBP2.15□□□□□ -2.07
RUFY3-214ENST00000515442 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
RUFY3-214ENST00000515442 UBA52P62987 128 aaKnown RBP2.14□□□□□ -2.07
RUFY3-214ENST00000515442 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
RUFY3-214ENST00000515442 PPP1R1CQ8WVI7 109 aa2.14□□□□□ -2.07
RUFY3-214ENST00000515442 ZNF625Q96I27 306 aaPredicted RBP2.14□□□□□ -2.07
RUFY3-214ENST00000515442 COL4A1P02462 1669 aa2.14□□□□□ -2.07
RUFY3-214ENST00000515442 CHD9Q3L8U1 2897 aa2.14□□□□□ -2.07
RUFY3-214ENST00000515442 SSC5DA1L4H1 1573 aa2.14□□□□□ -2.07
RUFY3-214ENST00000515442 PLXNA2O75051 1894 aa2.14□□□□□ -2.07
RUFY3-214ENST00000515442 FN1P02751 2386 aaKnown RBP2.13□□□□□ -2.07
RUFY3-214ENST00000515442 PSME4Q14997 1843 aa2.13□□□□□ -2.07
RUFY3-214ENST00000515442 CDH23Q9H251 3354 aa2.13□□□□□ -2.07
RUFY3-214ENST00000515442 KRTAP10-1P60331 282 aa2.13□□□□□ -2.07
RUFY3-214ENST00000515442 GNGT1P63211 74 aa2.13□□□□□ -2.07
RUFY3-214ENST00000515442 CYP2G1PQ6ZSU1 146 aa2.13□□□□□ -2.07
RUFY3-214ENST00000515442 C15orf53Q8NAA6 179 aa2.13□□□□□ -2.07
RUFY3-214ENST00000515442 MYOZ3Q8TDC0 251 aa2.13□□□□□ -2.07
RUFY3-214ENST00000515442 CHD7Q9P2D1 2997 aa2.13□□□□□ -2.07
RUFY3-214ENST00000515442 A0A1B0GUL6 1792 aa2.13□□□□□ -2.07
RUFY3-214ENST00000515442 ICE1Q9Y2F5 2266 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 EML5Q05BV3 1969 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 ALPK2Q86TB3 2170 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 IGKV3D-7A0A0C4DH55 119 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 IGKV3OR2-268A0A0C4DH90 116 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 RBAKDNA6NC62 111 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 HCG22E2RYF7 251 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 PRB4P10163 310 aaPredicted RBP2.12□□□□□ -2.07
RUFY3-214ENST00000515442 IL9P15248 144 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 KRTDAPP60985 99 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 DEFB123Q8N688 67 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 ZNF563Q8TA94 476 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 WDR87Q6ZQQ6 2873 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 PTPRFP10586 1907 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 RBBP6Q7Z6E9 1792 aaKnown RBP2.12□□□□□ -2.07
RUFY3-214ENST00000515442 TRANK1O15050 2925 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 MCM3APO60318 1980 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 SIP14410 1827 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 PTPRZ1P23471 2315 aaPredicted RBP2.12□□□□□ -2.07
RUFY3-214ENST00000515442 XIRP2A4UGR9 3374 aa2.12□□□□□ -2.07
RUFY3-214ENST00000515442 TRIOO75962 3097 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 PLIN4Q96Q06 1357 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 CEP192Q8TEP8 1941 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 TRBV6-7A0A0A0MS04 114 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 TRBV7-1A0A0A6YYK4 115 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 UBE2D1P51668 147 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 RPL37AP61513 92 aaKnown RBP2.11□□□□□ -2.07
RUFY3-214ENST00000515442 SNRPFP62306 86 aaKnown RBP2.11□□□□□ -2.07
RUFY3-214ENST00000515442 SPRNQ5BIV9 151 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 C10orf82Q8WW14 230 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 VAMP8Q9BV40 100 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 LINC00312Q9Y6C7 94 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 MYH4Q9Y623 1939 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 MED12LQ86YW9 2145 aa2.11□□□□□ -2.07
RUFY3-214ENST00000515442 NAP1L6A6NFF2 107 aa2.1□□□□□ -2.07
RUFY3-214ENST00000515442 ZCCHC13Q8WW36 166 aaKnown RBP2.1□□□□□ -2.07
RUFY3-214ENST00000515442 SCP2D1Q9UJQ7 156 aa2.1□□□□□ -2.07
RUFY3-214ENST00000515442 RIF1Q5UIP0 2472 aaKnown RBP2.1□□□□□ -2.07
RUFY3-214ENST00000515442 CACNA1HO95180 2353 aa2.09□□□□□ -2.07
RUFY3-214ENST00000515442 REV3LO60673 3130 aa2.09□□□□□ -2.07
RUFY3-214ENST00000515442 MUC6Q6W4X9 2439 aa2.09□□□□□ -2.07
RUFY3-214ENST00000515442 SNCAP37840 140 aa2.09□□□□□ -2.07
RUFY3-214ENST00000515442 Q0VG73 95 aa2.09□□□□□ -2.07
RUFY3-214ENST00000515442 XAF1Q6GPH4 301 aa2.09□□□□□ -2.07
RUFY3-214ENST00000515442 C9orf62Q8N4C0 152 aa2.09□□□□□ -2.07
RUFY3-214ENST00000515442 DDX60LQ5H9U9 1706 aaKnown RBP2.08□□□□□ -2.08
RUFY3-214ENST00000515442 WDFY4Q6ZS81 3184 aa2.08□□□□□ -2.08
RUFY3-214ENST00000515442 TFF1P04155 84 aa2.08□□□□□ -2.08
RUFY3-214ENST00000515442 SSBP1Q04837 148 aaKnown RBP2.08□□□□□ -2.08
RUFY3-214ENST00000515442 PCOTHQ58A44 107 aa2.08□□□□□ -2.08
RUFY3-214ENST00000515442 ZNF720Q7Z2F6 126 aa2.08□□□□□ -2.08
RUFY3-214ENST00000515442 CACNA1GO43497 2377 aa2.08□□□□□ -2.08
RUFY3-214ENST00000515442 CFAP54Q96N23 3096 aa2.08□□□□□ -2.08
RUFY3-214ENST00000515442 HEATR1Q9H583 2144 aaKnown RBP2.08□□□□□ -2.08
RUFY3-214ENST00000515442 CITO14578 2027 aa2.07□□□□□ -2.08
RUFY3-214ENST00000515442 CR1P17927 2039 aa2.07□□□□□ -2.08
RUFY3-214ENST00000515442 IGKV2-40A0A087WW87 121 aaPredicted RBP2.07□□□□□ -2.08
RUFY3-214ENST00000515442 IGKV2D-40P01614 121 aaPredicted RBP2.07□□□□□ -2.08
RUFY3-214ENST00000515442 MT-ATP8P03928 68 aa2.07□□□□□ -2.08
RUFY3-214ENST00000515442 ASIPP42127 132 aa2.07□□□□□ -2.08
RUFY3-214ENST00000515442 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms