RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 GYPAP02724 150 aa2.41□□□□□ -2.02
LDHBP3-201ENST00000514909 NPVFQ9HCQ7 196 aa2.41□□□□□ -2.02
LDHBP3-201ENST00000514909 MLH3Q9UHC1 1453 aa2.4□□□□□ -2.02
LDHBP3-201ENST00000514909 IGLC7A0M8Q6 106 aa2.4□□□□□ -2.03
LDHBP3-201ENST00000514909 TRAPPC2P0DI81 140 aa2.4□□□□□ -2.03
LDHBP3-201ENST00000514909 TRAPPC2BP0DI82 140 aa2.4□□□□□ -2.03
LDHBP3-201ENST00000514909 SMIM11BQ8TCY0 68 aa2.4□□□□□ -2.03
LDHBP3-201ENST00000514909 BPESC1Q9GZL8 116 aa2.4□□□□□ -2.03
LDHBP3-201ENST00000514909 EHBP1L1Q8N3D4 1523 aa2.4□□□□□ -2.03
LDHBP3-201ENST00000514909 ARHGEF5Q12774 1597 aa2.4□□□□□ -2.03
LDHBP3-201ENST00000514909 ARHGEF12Q9NZN5 1544 aa2.39□□□□□ -2.03
LDHBP3-201ENST00000514909 CNTRLQ7Z7A1 2325 aa2.39□□□□□ -2.03
LDHBP3-201ENST00000514909 DOCK11Q5JSL3 2073 aa2.39□□□□□ -2.03
LDHBP3-201ENST00000514909 TMEM14DPA8MWL7 114 aa2.39□□□□□ -2.03
LDHBP3-201ENST00000514909 FXYD6P3P58550 94 aa2.39□□□□□ -2.03
LDHBP3-201ENST00000514909 IFT172Q9UG01 1749 aa2.39□□□□□ -2.03
LDHBP3-201ENST00000514909 ABCC3O15438 1527 aa2.38□□□□□ -2.03
LDHBP3-201ENST00000514909 HMGXB3Q12766 1538 aa2.38□□□□□ -2.03
LDHBP3-201ENST00000514909 CDK13Q14004 1512 aaKnown RBP2.38□□□□□ -2.03
LDHBP3-201ENST00000514909 ZMYM4Q5VZL5 1548 aa2.38□□□□□ -2.03
LDHBP3-201ENST00000514909 APOC3P02656 99 aa2.38□□□□□ -2.03
LDHBP3-201ENST00000514909 CACFD1Q9UGQ2 172 aa2.38□□□□□ -2.03
LDHBP3-201ENST00000514909 LINC01558Q9Y6Z2 57 aa2.38□□□□□ -2.03
LDHBP3-201ENST00000514909 MED14O60244 1454 aa2.38□□□□□ -2.03
LDHBP3-201ENST00000514909 KDM5AP29375 1690 aaKnown RBP2.37□□□□□ -2.03
LDHBP3-201ENST00000514909 COL4A6Q14031 1691 aa2.37□□□□□ -2.03
LDHBP3-201ENST00000514909 MED13LQ71F56 2210 aa2.37□□□□□ -2.03
LDHBP3-201ENST00000514909 GVQW2A0A096LPI5 108 aaPredicted RBP2.37□□□□□ -2.03
LDHBP3-201ENST00000514909 CTXND1A0A1B0GTU2 59 aa2.37□□□□□ -2.03
LDHBP3-201ENST00000514909 UQCR11O14957 56 aa2.37□□□□□ -2.03
LDHBP3-201ENST00000514909 BAGE2Q86Y30 109 aa2.37□□□□□ -2.03
LDHBP3-201ENST00000514909 FAUP35544 74 aaKnown RBP2.36□□□□□ -2.03
LDHBP3-201ENST00000514909 SPINT3P49223 89 aa2.36□□□□□ -2.03
LDHBP3-201ENST00000514909 SMIM4Q8WVI0 70 aa2.36□□□□□ -2.03
LDHBP3-201ENST00000514909 SBF2Q86WG5 1849 aa2.35□□□□□ -2.03
LDHBP3-201ENST00000514909 H7BZZ5 65 aa2.35□□□□□ -2.03
LDHBP3-201ENST00000514909 ZNF137PP52743 207 aa2.35□□□□□ -2.03
LDHBP3-201ENST00000514909 NXT2Q9NPJ8 142 aaKnown RBP2.35□□□□□ -2.03
LDHBP3-201ENST00000514909 SYS1-DBNDD2H3BUS1 97 aa2.34□□□□□ -2.03
LDHBP3-201ENST00000514909 KIF21AQ7Z4S6 1674 aa2.34□□□□□ -2.04
LDHBP3-201ENST00000514909 A0A0G2JND7 137 aa2.33□□□□□ -2.04
LDHBP3-201ENST00000514909 SFTA2Q6UW10 78 aa2.33□□□□□ -2.04
LDHBP3-201ENST00000514909 ARL2-SNX15V9GYD0 113 aa2.33□□□□□ -2.04
LDHBP3-201ENST00000514909 SAA2P0DJI9 122 aaPredicted RBP2.32□□□□□ -2.04
LDHBP3-201ENST00000514909 COX17Q14061 63 aa2.32□□□□□ -2.04
LDHBP3-201ENST00000514909 PYY3Q5JQD4 70 aa2.32□□□□□ -2.04
LDHBP3-201ENST00000514909 Q6ZRX8 168 aa2.32□□□□□ -2.04
LDHBP3-201ENST00000514909 EPRSP07814 1512 aaKnown RBP2.32□□□□□ -2.04
LDHBP3-201ENST00000514909 SSC5DA1L4H1 1573 aa2.32□□□□□ -2.04
LDHBP3-201ENST00000514909 ABCA1O95477 2261 aa2.31□□□□□ -2.04
LDHBP3-201ENST00000514909 LAMA4Q16363 1823 aa2.31□□□□□ -2.04
LDHBP3-201ENST00000514909 CFAP126Q5VTH2 177 aa2.31□□□□□ -2.04
LDHBP3-201ENST00000514909 FAM223AQ8IWN6 122 aa2.31□□□□□ -2.04
LDHBP3-201ENST00000514909 PRO1933Q9H354 126 aa2.31□□□□□ -2.04
LDHBP3-201ENST00000514909 COL6A6A6NMZ7 2263 aa2.31□□□□□ -2.04
LDHBP3-201ENST00000514909 CCDC18Q5T9S5 1454 aa2.31□□□□□ -2.04
LDHBP3-201ENST00000514909 TRBV25-1A0A075B6N4 114 aa2.3□□□□□ -2.04
LDHBP3-201ENST00000514909 UQCRHLA0A096LP55 91 aa2.3□□□□□ -2.04
LDHBP3-201ENST00000514909 FANCAO15360 1455 aa2.3□□□□□ -2.04
LDHBP3-201ENST00000514909 MON2Q7Z3U7 1717 aa2.3□□□□□ -2.04
LDHBP3-201ENST00000514909 UNC13BO14795 1591 aa2.29□□□□□ -2.04
LDHBP3-201ENST00000514909 CEP162Q5TB80 1403 aa2.29□□□□□ -2.04
LDHBP3-201ENST00000514909 C10orf142B7Z368 130 aa2.29□□□□□ -2.04
LDHBP3-201ENST00000514909 K7EP34 96 aa2.29□□□□□ -2.04
LDHBP3-201ENST00000514909 LCN9Q8WX39 176 aa2.29□□□□□ -2.04
LDHBP3-201ENST00000514909 C20orf78Q9BR46 151 aa2.29□□□□□ -2.04
LDHBP3-201ENST00000514909 CLTCQ00610 1675 aaKnown RBP2.28□□□□□ -2.04
LDHBP3-201ENST00000514909 UQCRHP07919 91 aa2.28□□□□□ -2.04
LDHBP3-201ENST00000514909 PMCHL1Q16048 86 aa2.28□□□□□ -2.04
LDHBP3-201ENST00000514909 ZNF236Q9UL36 1845 aa2.27□□□□□ -2.05
LDHBP3-201ENST00000514909 MGPP08493 103 aa2.27□□□□□ -2.05
LDHBP3-201ENST00000514909 ATP10BO94823 1461 aa2.26□□□□□ -2.05
LDHBP3-201ENST00000514909 FAM223BA6NKX1 122 aa2.26□□□□□ -2.05
LDHBP3-201ENST00000514909 GCHFRP30047 84 aa2.26□□□□□ -2.05
LDHBP3-201ENST00000514909 SPINK9Q5DT21 86 aa2.26□□□□□ -2.05
LDHBP3-201ENST00000514909 PRR15LQ9BU68 103 aa2.26□□□□□ -2.05
LDHBP3-201ENST00000514909 SCN7AQ01118 1682 aa2.25□□□□□ -2.05
LDHBP3-201ENST00000514909 G3V318 75 aa2.25□□□□□ -2.05
LDHBP3-201ENST00000514909 LRRC37A2A6NM11 1700 aa2.25□□□□□ -2.05
LDHBP3-201ENST00000514909 RAPGEF6Q8TEU7 1601 aa2.24□□□□□ -2.05
LDHBP3-201ENST00000514909 ROS1P08922 2347 aa2.24□□□□□ -2.05
LDHBP3-201ENST00000514909 F5P12259 2224 aa2.24□□□□□ -2.05
LDHBP3-201ENST00000514909 SPRR4Q96PI1 79 aa2.24□□□□□ -2.05
LDHBP3-201ENST00000514909 LINC00472Q9H8W2 130 aa2.24□□□□□ -2.05
LDHBP3-201ENST00000514909 ZDBF2Q9HCK1 2354 aa2.24□□□□□ -2.05
LDHBP3-201ENST00000514909 RGPD4Q7Z3J3 1758 aa2.23□□□□□ -2.05
LDHBP3-201ENST00000514909 PIN1P1O15428 100 aa2.23□□□□□ -2.05
LDHBP3-201ENST00000514909 PROK2Q9HC23 129 aa2.23□□□□□ -2.05
LDHBP3-201ENST00000514909 ARHGAP35Q9NRY4 1499 aa2.22□□□□□ -2.05
LDHBP3-201ENST00000514909 BCE1O60756 84 aa2.22□□□□□ -2.05
LDHBP3-201ENST00000514909 UACAQ9BZF9 1416 aa2.22□□□□□ -2.05
LDHBP3-201ENST00000514909 PLIN4Q96Q06 1357 aa2.22□□□□□ -2.05
LDHBP3-201ENST00000514909 IQSEC2Q5JU85 1478 aa2.21□□□□□ -2.06
LDHBP3-201ENST00000514909 NRXN1Q9ULB1 1477 aa2.21□□□□□ -2.06
LDHBP3-201ENST00000514909 A0A1B0GWA3 101 aa2.21□□□□□ -2.06
LDHBP3-201ENST00000514909 CYB5AP00167 134 aa2.21□□□□□ -2.06
LDHBP3-201ENST00000514909 OTOGLQ3ZCN5 2332 aa2.21□□□□□ -2.06
LDHBP3-201ENST00000514909 PSMG4Q5JS54 123 aa2.21□□□□□ -2.06
LDHBP3-201ENST00000514909 ABCC2Q92887 1545 aa2.2□□□□□ -2.06
LDHBP3-201ENST00000514909 EDC4Q6P2E9 1401 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms