RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 C3orf22Q8N5N4 141 aa13.25□□□□□ -0.29
TNFRSF8-205ENST00000514649 Q9UF83 564 aa13.25□□□□□ -0.29
TNFRSF8-205ENST00000514649 TRGV11A0A075B6L2 103 aa13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 LST1O00453 97 aa13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 SYNJ2BPP57105 145 aa13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 NPC2P61916 151 aa13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 NDUFA12Q9UI09 145 aa13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 V9GYY9 64 aa13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 LRRK2Q5S007 2527 aa13.24□□□□□ -0.29
TNFRSF8-205ENST00000514649 IGHV4-30-2A0A087WSY4 118 aa13.23□□□□□ -0.29
TNFRSF8-205ENST00000514649 UQCRQO14949 82 aa13.23□□□□□ -0.29
TNFRSF8-205ENST00000514649 PRM2P04554 102 aa13.23□□□□□ -0.29
TNFRSF8-205ENST00000514649 MSMBP08118 114 aa13.23□□□□□ -0.29
TNFRSF8-205ENST00000514649 KNCNA6PVL3 124 aa13.22□□□□□ -0.29
TNFRSF8-205ENST00000514649 LINC00526Q96FQ7 95 aa13.22□□□□□ -0.29
TNFRSF8-205ENST00000514649 VSIG2Q96IQ7 327 aa13.22□□□□□ -0.29
TNFRSF8-205ENST00000514649 CCL19Q99731 98 aa13.21□□□□□ -0.29
TNFRSF8-205ENST00000514649 TENM4Q6N022 2769 aa13.21□□□□□ -0.29
TNFRSF8-205ENST00000514649 CREBBPQ92793 2442 aa13.21□□□□□ -0.29
TNFRSF8-205ENST00000514649 IGHV4-59P01825 116 aa13.21□□□□□ -0.3
TNFRSF8-205ENST00000514649 MIAQ16674 131 aa13.21□□□□□ -0.3
TNFRSF8-205ENST00000514649 Q6ZSN1 163 aa13.2□□□□□ -0.3
TNFRSF8-205ENST00000514649 C3orf56Q8N813 242 aa13.2□□□□□ -0.3
TNFRSF8-205ENST00000514649 CLEC2BQ92478 149 aa13.2□□□□□ -0.3
TNFRSF8-205ENST00000514649 FAM236AA0A1B0GUQ0 79 aa13.19□□□□□ -0.3
TNFRSF8-205ENST00000514649 FAM236BA0A1B0GV22 79 aa13.19□□□□□ -0.3
TNFRSF8-205ENST00000514649 RNF152Q8N8N0 203 aa13.19□□□□□ -0.3
TNFRSF8-205ENST00000514649 CHCHD7Q9BUK0 85 aa13.19□□□□□ -0.3
TNFRSF8-205ENST00000514649 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-205ENST00000514649 IGKV2-29A2NJV5 120 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-205ENST00000514649 ATP5G1P05496 136 aa13.19□□□□□ -0.3
TNFRSF8-205ENST00000514649 UBE2D4Q9Y2X8 147 aa13.19□□□□□ -0.3
TNFRSF8-205ENST00000514649 NACAE9PAV3 2078 aa13.18□□□□□ -0.3
TNFRSF8-205ENST00000514649 DEFB112Q30KQ8 113 aa13.17□□□□□ -0.3
TNFRSF8-205ENST00000514649 HRCT1Q6UXD1 115 aa13.17□□□□□ -0.3
TNFRSF8-205ENST00000514649 DAND5Q8N907 189 aa13.17□□□□□ -0.3
TNFRSF8-205ENST00000514649 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
TNFRSF8-205ENST00000514649 TMEM61Q8N0U2 210 aa13.16□□□□□ -0.3
TNFRSF8-205ENST00000514649 C4orf26Q17RF5 130 aa13.15□□□□□ -0.3
TNFRSF8-205ENST00000514649 LINC00643Q86TS7 51 aa13.15□□□□□ -0.3
TNFRSF8-205ENST00000514649 HELZ2Q9BYK8 2649 aaKnown RBP13.15□□□□□ -0.3
TNFRSF8-205ENST00000514649 IGHV3-38A0A0C4DH36 116 aa13.15□□□□□ -0.3
TNFRSF8-205ENST00000514649 HOXD3P31249 432 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF8-205ENST00000514649 Q5XG85 94 aa13.15□□□□□ -0.3
TNFRSF8-205ENST00000514649 LINC00467Q9BRT7 94 aa13.15□□□□□ -0.3
TNFRSF8-205ENST00000514649 C1orf43Q9BWL3 253 aa13.15□□□□□ -0.3
TNFRSF8-205ENST00000514649 DEFB131AP59861 70 aa13.14□□□□□ -0.31
TNFRSF8-205ENST00000514649 CDKN2A-AS1Q9UH64 79 aa13.14□□□□□ -0.31
TNFRSF8-205ENST00000514649 TMEM89A2RUT3 159 aa13.13□□□□□ -0.31
TNFRSF8-205ENST00000514649 B4DSR2 109 aa13.13□□□□□ -0.31
TNFRSF8-205ENST00000514649 USP9YO00507 2555 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF8-205ENST00000514649 RBMY1BA6NDE4 496 aaKnown RBP13.12□□□□□ -0.31
TNFRSF8-205ENST00000514649 RBMY1EA6NEQ0 496 aaKnown RBP13.12□□□□□ -0.31
TNFRSF8-205ENST00000514649 TIMM17BO60830 172 aa13.12□□□□□ -0.31
TNFRSF8-205ENST00000514649 RBMY1DP0C7P1 496 aaKnown RBP13.12□□□□□ -0.31
TNFRSF8-205ENST00000514649 PLA2G2AP14555 144 aa13.11□□□□□ -0.31
TNFRSF8-205ENST00000514649 SDIM1Q6ZPB5 146 aa13.11□□□□□ -0.31
TNFRSF8-205ENST00000514649 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF8-205ENST00000514649 CRYGAP11844 174 aa13.11□□□□□ -0.31
TNFRSF8-205ENST00000514649 CXCL5P42830 114 aa13.11□□□□□ -0.31
TNFRSF8-205ENST00000514649 GAGE2AQ6NT46 116 aa13.11□□□□□ -0.31
TNFRSF8-205ENST00000514649 CENPEQ02224 2701 aa13.11□□□□□ -0.31
TNFRSF8-205ENST00000514649 DPH3Q96FX2 82 aa13.1□□□□□ -0.31
TNFRSF8-205ENST00000514649 CSMD2Q7Z408 3487 aa13.09□□□□□ -0.31
TNFRSF8-205ENST00000514649 RPL35AP18077 110 aaKnown RBP13.09□□□□□ -0.31
TNFRSF8-205ENST00000514649 COX6A2Q02221 97 aa13.09□□□□□ -0.31
TNFRSF8-205ENST00000514649 TMEM86BQ8N661 226 aa13.09□□□□□ -0.31
TNFRSF8-205ENST00000514649 GCN1Q92616 2671 aaKnown RBP13.08□□□□□ -0.31
TNFRSF8-205ENST00000514649 NDUFA1O15239 70 aa13.08□□□□□ -0.32
TNFRSF8-205ENST00000514649 TMEM258P61165 79 aa13.08□□□□□ -0.32
TNFRSF8-205ENST00000514649 SMCR5Q8TEV8 140 aa13.08□□□□□ -0.32
TNFRSF8-205ENST00000514649 UBE2E2Q96LR5 201 aa13.08□□□□□ -0.32
TNFRSF8-205ENST00000514649 IGHV3-53P01767 116 aa13.07□□□□□ -0.32
TNFRSF8-205ENST00000514649 SLURP1P55000 103 aa13.07□□□□□ -0.32
TNFRSF8-205ENST00000514649 TIRAPP58753 221 aa13.07□□□□□ -0.32
TNFRSF8-205ENST00000514649 DEFB136Q30KP8 78 aa13.07□□□□□ -0.32
TNFRSF8-205ENST00000514649 C5orf38Q86SI9 138 aa13.07□□□□□ -0.32
TNFRSF8-205ENST00000514649 A0A0U1RRA0 63 aa13.07□□□□□ -0.32
TNFRSF8-205ENST00000514649 PIK3CD-AS1Q5SR53 167 aa13.07□□□□□ -0.32
TNFRSF8-205ENST00000514649 ZNF625Q96I27 306 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF8-205ENST00000514649 IGLV5-45A0A087WSX0 123 aa13.06□□□□□ -0.32
TNFRSF8-205ENST00000514649 A8MTW9 85 aa13.06□□□□□ -0.32
TNFRSF8-205ENST00000514649 COX7CP15954 63 aa13.06□□□□□ -0.32
TNFRSF8-205ENST00000514649 DGAT2L7PQ6IED9 249 aa13.06□□□□□ -0.32
TNFRSF8-205ENST00000514649 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
TNFRSF8-205ENST00000514649 PEMTQ9UBM1 199 aa13.06□□□□□ -0.32
TNFRSF8-205ENST00000514649 J3QKU1 62 aa13.05□□□□□ -0.32
TNFRSF8-205ENST00000514649 CIRBPQ14011 172 aaKnown RBP13.05□□□□□ -0.32
TNFRSF8-205ENST00000514649 C6orf226Q5I0X4 101 aa13.05□□□□□ -0.32
TNFRSF8-205ENST00000514649 C11orf72Q8NBR9 251 aa13.05□□□□□ -0.32
TNFRSF8-205ENST00000514649 LINC00308Q8TCZ7 52 aa13.05□□□□□ -0.32
TNFRSF8-205ENST00000514649 Q9H8V8 135 aa13.05□□□□□ -0.32
TNFRSF8-205ENST00000514649 ZANQ9Y493 2812 aa13.05□□□□□ -0.32
TNFRSF8-205ENST00000514649 COX7A2LO14548 114 aa13.05□□□□□ -0.32
TNFRSF8-205ENST00000514649 KLK5Q9Y337 293 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF8-205ENST00000514649 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
TNFRSF8-205ENST00000514649 FBN2P35556 2912 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms