RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 NIT2Q9NQR4 276 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 XCL2Q9UBD3 114 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 DNAH1Q9P2D7 4330 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 TRBV6-5A0A0K0K1A5 114 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 IFI27P40305 119 aaPredicted RBP3.17□□□□□ -1.9
CLDND1-228ENST00000513873 NDUFV3P56181 108 aaKnown RBP3.17□□□□□ -1.9
CLDND1-228ENST00000513873 FXYD7P58549 80 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 DEFB1P60022 68 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 DAZ2Q13117 558 aaKnown RBP3.17□□□□□ -1.9
CLDND1-228ENST00000513873 FAM74A4Q5TZK3 123 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 OR4C5Q8NGB2 326 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 RNF185Q96GF1 192 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 VAMP8Q9BV40 100 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 OCR1Q9BZK8 76 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 EDA2RQ9HAV5 297 aa3.17□□□□□ -1.9
CLDND1-228ENST00000513873 TRGV2A0A075B6R0 118 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 TRGV1A0A0A0MS02 117 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 IGHV1-24A0A0C4DH33 117 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 TRBV10-1A0A0K0K1A3 114 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 LINC01546A6NGU7 62 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.16□□□□□ -1.9
CLDND1-228ENST00000513873 I3L3M4 83 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 CRXO43186 299 aaPredicted RBP3.16□□□□□ -1.9
CLDND1-228ENST00000513873 NPYP01303 97 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 AZU1P20160 251 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 KRTAP10-3P60369 221 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 PKIAP61925 76 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 RHOHQ15669 191 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 TMEM97Q5BJF2 176 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 Q6ZN92 141 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 SPATA12Q7Z6I5 190 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 IFI27L1Q96BM0 104 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 PRADC1Q9BSG0 188 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 SMIM2Q9BVW6 85 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 CYSLTR1Q9Y271 337 aa3.16□□□□□ -1.9
CLDND1-228ENST00000513873 TRAV4A0A0B4J268 109 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 TRBV27A0A0K0K1C4 114 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 LCE6AA0A183 80 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 G3V4G9 280 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 SYS1-DBNDD2H3BUS1 97 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 RS1O15537 224 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 NCR2O95944 276 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 PRB2P02812 416 aaPredicted RBP3.15□□□□□ -1.91
CLDND1-228ENST00000513873 MIFP14174 115 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 PLNP26678 52 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 PYY3Q5JQD4 70 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 ZNF705AQ6ZN79 300 aaPredicted RBP3.15□□□□□ -1.91
CLDND1-228ENST00000513873 FAM19A2Q8N3H0 131 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 RNASE8Q8TDE3 154 aaKnown RBP3.15□□□□□ -1.91
CLDND1-228ENST00000513873 TMEM141Q96I45 108 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 SCGB3A1Q96QR1 104 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 PMCHL2Q9BQD1 86 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 HECTD4Q9Y4D8 3996 aa3.15□□□□□ -1.91
CLDND1-228ENST00000513873 TRAV9-2A0A087WT02 112 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 TRGV4A0A0C4DH28 118 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 RBMY1BA6NDE4 496 aaKnown RBP3.14□□□□□ -1.91
CLDND1-228ENST00000513873 RBMY1EA6NEQ0 496 aaKnown RBP3.14□□□□□ -1.91
CLDND1-228ENST00000513873 SDHAF1A6NFY7 115 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 LYRM9A8MSI8 78 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 SMKR1H3BMG3 65 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 M0QY20 66 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 NUPR1O60356 82 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 IGHV3-53P01767 116 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 CRYGDP07320 174 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 RBMY1DP0C7P1 496 aaKnown RBP3.14□□□□□ -1.91
CLDND1-228ENST00000513873 C3orf79P0CE67 100 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 IGLL1P15814 213 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 COTL1Q14019 142 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 CFAP126Q5VTH2 177 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 LGALS9CQ6DKI2 356 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 ERASQ7Z444 233 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 SH2D6Q7Z4S9 175 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 DAZ4Q86SG3 579 aaKnown RBP3.14□□□□□ -1.91
CLDND1-228ENST00000513873 C1orf158Q8N1D5 194 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 C11orf72Q8NBR9 251 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 C18orf15Q96N68 181 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 NOP10Q9NPE3 64 aaKnown RBP3.14□□□□□ -1.91
CLDND1-228ENST00000513873 DAZ3Q9NR90 486 aaKnown RBP3.14□□□□□ -1.91
CLDND1-228ENST00000513873 TP53TG1Q9Y2A0 90 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 KIF25-AS1Q9Y6Z4 181 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 HERC2O95714 4834 aa3.14□□□□□ -1.91
CLDND1-228ENST00000513873 MUC4Q99102 2169 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 TRBV7-3A0A075B6L6 115 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 TRAV12-1A0A0B4J245 112 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 A0A1B0GVY2 172 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 TRBV6-4A0A1B0GX49 114 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 PCP4L1A6NKN8 68 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 SPART-AS1P0CW21 52 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 RBMY1A1P0DJD3 496 aaKnown RBP3.13□□□□□ -1.91
CLDND1-228ENST00000513873 RBMY1CP0DJD4 496 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 CRYBA4P53673 196 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 POLR2KP53803 58 aaKnown RBP3.13□□□□□ -1.91
CLDND1-228ENST00000513873 HERVK_113P61574 105 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 RBMY1FQ15415 496 aaKnown RBP3.13□□□□□ -1.91
CLDND1-228ENST00000513873 CASC10Q5T4H9 136 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 LINC01545Q5VT33 79 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 TEX43Q6ZNM6 134 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 Q6ZQT7 251 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms