RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 ZFHX3Q15911 3703 aa10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 RBMY1A1P0DJD3 496 aaKnown RBP10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 RBMY1CP0DJD4 496 aa10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 LINC00315P59091 139 aa10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 RBMY1FQ15415 496 aaKnown RBP10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 NIPBLQ6KC79 2804 aaeCLIP10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 H3BMM0 161 aa10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 RPL36AP83881 106 aaKnown RBP10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 ATXN8Q156A1 80 aa10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 Q6ZTI0 123 aa10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 RPL36ALQ969Q0 106 aaKnown RBP10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 TIMM17AQ99595 171 aa10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 UBR5O95071 2799 aaPredicted RBP10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 DSCR9P59020 149 aa10.05□□□□□ -0.8
AP001999.1-201ENST00000513405 NFE4Q86UQ8 179 aa10.04□□□□□ -0.8
AP001999.1-201ENST00000513405 LINC00158P58513 81 aa10.04□□□□□ -0.8
AP001999.1-201ENST00000513405 VPS13CQ709C8 3753 aa10.04□□□□□ -0.8
AP001999.1-201ENST00000513405 ITPR2Q14571 2701 aa10.04□□□□□ -0.8
AP001999.1-201ENST00000513405 DEFB4AO15263 64 aa10.04□□□□□ -0.8
AP001999.1-201ENST00000513405 DNAL4O96015 105 aa10.04□□□□□ -0.8
AP001999.1-201ENST00000513405 KIF25-AS1Q9Y6Z4 181 aa10.04□□□□□ -0.8
AP001999.1-201ENST00000513405 TRBV27A0A0K0K1C4 114 aa10.03□□□□□ -0.8
AP001999.1-201ENST00000513405 UBE2WQ96B02 151 aa10.03□□□□□ -0.8
AP001999.1-201ENST00000513405 MAP6D1Q9H9H5 199 aa10.03□□□□□ -0.8
AP001999.1-201ENST00000513405 LEPROTO15243 131 aa10.03□□□□□ -0.8
AP001999.1-201ENST00000513405 GAGE2AQ6NT46 116 aa10.03□□□□□ -0.8
AP001999.1-201ENST00000513405 SLC25A29Q8N8R3 303 aa10.03□□□□□ -0.8
AP001999.1-201ENST00000513405 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
AP001999.1-201ENST00000513405 A0A0J9YXY3 114 aa10.02□□□□□ -0.8
AP001999.1-201ENST00000513405 PF4P02776 101 aa10.02□□□□□ -0.8
AP001999.1-201ENST00000513405 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.8
AP001999.1-201ENST00000513405 ZNF702PQ9H963 129 aa10.02□□□□□ -0.8
AP001999.1-201ENST00000513405 SCGB1A1P11684 91 aa10.02□□□□□ -0.81
AP001999.1-201ENST00000513405 RHOHQ15669 191 aa10.02□□□□□ -0.81
AP001999.1-201ENST00000513405 CCL24O00175 119 aa10.02□□□□□ -0.81
AP001999.1-201ENST00000513405 LGALS9O00182 355 aa10.02□□□□□ -0.81
AP001999.1-201ENST00000513405 IGHV3-30P01768 117 aa10.02□□□□□ -0.81
AP001999.1-201ENST00000513405 IGHV3-30-5P0DP03 117 aa10.02□□□□□ -0.81
AP001999.1-201ENST00000513405 IGHV4-31P0DP07 118 aa10.02□□□□□ -0.81
AP001999.1-201ENST00000513405 C5orf38Q86SI9 138 aa10.01□□□□□ -0.81
AP001999.1-201ENST00000513405 TEP1Q99973 2627 aaKnown RBP10.01□□□□□ -0.81
AP001999.1-201ENST00000513405 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.01□□□□□ -0.81
AP001999.1-201ENST00000513405 MED14OSP0DP75 135 aa10.01□□□□□ -0.81
AP001999.1-201ENST00000513405 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
AP001999.1-201ENST00000513405 TMEM101Q96IK0 257 aa10.01□□□□□ -0.81
AP001999.1-201ENST00000513405 NXPH4O95158 308 aa10.01□□□□□ -0.81
AP001999.1-201ENST00000513405 C9orf85Q96MD7 179 aa10□□□□□ -0.81
AP001999.1-201ENST00000513405 LOC100131303A0A0U1RQF7 123 aa10□□□□□ -0.81
AP001999.1-201ENST00000513405 TRAV4A0A0B4J268 109 aa10□□□□□ -0.81
AP001999.1-201ENST00000513405 TMEM223A0PJW6 202 aa10□□□□□ -0.81
AP001999.1-201ENST00000513405 DEFB113Q30KQ7 82 aa10□□□□□ -0.81
AP001999.1-201ENST00000513405 RBMY1BA6NDE4 496 aaKnown RBP9.99□□□□□ -0.81
AP001999.1-201ENST00000513405 RBMY1EA6NEQ0 496 aaKnown RBP9.99□□□□□ -0.81
AP001999.1-201ENST00000513405 PAX4O43316 350 aa9.99□□□□□ -0.81
AP001999.1-201ENST00000513405 RBMY1DP0C7P1 496 aaKnown RBP9.99□□□□□ -0.81
AP001999.1-201ENST00000513405 TINCRA0A1B0GVN0 87 aa9.98□□□□□ -0.81
AP001999.1-201ENST00000513405 ADAMTSL4-AS1Q5T5F5 129 aa9.98□□□□□ -0.81
AP001999.1-201ENST00000513405 CFAP126Q5VTH2 177 aa9.98□□□□□ -0.81
AP001999.1-201ENST00000513405 SETXQ7Z333 2677 aaKnown RBP9.98□□□□□ -0.81
AP001999.1-201ENST00000513405 CRLF1O75462 422 aa9.98□□□□□ -0.81
AP001999.1-201ENST00000513405 Q6YL49 198 aa9.98□□□□□ -0.81
AP001999.1-201ENST00000513405 Q9HAA7 133 aa9.98□□□□□ -0.81
AP001999.1-201ENST00000513405 EDA2RQ9HAV5 297 aa9.97□□□□□ -0.81
AP001999.1-201ENST00000513405 IFITM1P13164 125 aa9.97□□□□□ -0.81
AP001999.1-201ENST00000513405 DEFB114Q30KQ6 69 aa9.97□□□□□ -0.81
AP001999.1-201ENST00000513405 IGHV3-33P01772 117 aa9.97□□□□□ -0.81
AP001999.1-201ENST00000513405 POM121L12Q8N7R1 296 aa9.97□□□□□ -0.81
AP001999.1-201ENST00000513405 HIST1H4AP62805 103 aaKnown RBP9.96□□□□□ -0.81
AP001999.1-201ENST00000513405 TRIAP1O43715 76 aa9.96□□□□□ -0.81
AP001999.1-201ENST00000513405 PIK3CD-AS1Q5SR53 167 aa9.96□□□□□ -0.81
AP001999.1-201ENST00000513405 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
AP001999.1-201ENST00000513405 LINC00694P0DN24 101 aa9.96□□□□□ -0.82
AP001999.1-201ENST00000513405 SMCPP49901 116 aaPredicted RBP9.96□□□□□ -0.82
AP001999.1-201ENST00000513405 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
AP001999.1-201ENST00000513405 IGHV1-58A0A0C4DH39 117 aa9.95□□□□□ -0.82
AP001999.1-201ENST00000513405 J3QLI3 93 aa9.95□□□□□ -0.82
AP001999.1-201ENST00000513405 UBE2D1P51668 147 aa9.95□□□□□ -0.82
AP001999.1-201ENST00000513405 XCL1P47992 114 aa9.95□□□□□ -0.82
AP001999.1-201ENST00000513405 DNAJC9-AS1A6NH13 148 aa9.94□□□□□ -0.82
AP001999.1-201ENST00000513405 ICOSQ9Y6W8 199 aa9.94□□□□□ -0.82
AP001999.1-201ENST00000513405 COX6A2Q02221 97 aa9.94□□□□□ -0.82
AP001999.1-201ENST00000513405 SMR3AQ99954 134 aa9.94□□□□□ -0.82
AP001999.1-201ENST00000513405 FAM19A4Q96LR4 140 aa9.93□□□□□ -0.82
AP001999.1-201ENST00000513405 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
AP001999.1-201ENST00000513405 CCDC179H3BU77 68 aa9.93□□□□□ -0.82
AP001999.1-201ENST00000513405 VSIG2Q96IQ7 327 aa9.93□□□□□ -0.82
AP001999.1-201ENST00000513405 IGKV3D-7A0A0C4DH55 119 aa9.93□□□□□ -0.82
AP001999.1-201ENST00000513405 LINC01546A6NGU7 62 aa9.93□□□□□ -0.82
AP001999.1-201ENST00000513405 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
AP001999.1-201ENST00000513405 ODF3L2Q3SX64 289 aa9.92□□□□□ -0.82
AP001999.1-201ENST00000513405 TMEM243Q9BU79 118 aa9.92□□□□□ -0.82
AP001999.1-201ENST00000513405 ATP5G1P05496 136 aa9.92□□□□□ -0.82
AP001999.1-201ENST00000513405 FAM236AA0A1B0GUQ0 79 aa9.92□□□□□ -0.82
AP001999.1-201ENST00000513405 FAM236BA0A1B0GV22 79 aa9.92□□□□□ -0.82
AP001999.1-201ENST00000513405 EIF4EBP3O60516 100 aaPredicted RBP9.91□□□□□ -0.82
AP001999.1-201ENST00000513405 TMEM89A2RUT3 159 aa9.9□□□□□ -0.82
AP001999.1-201ENST00000513405 C9orf153Q5TBE3 101 aa9.9□□□□□ -0.82
AP001999.1-201ENST00000513405 UBE2D4Q9Y2X8 147 aa9.9□□□□□ -0.82
AP001999.1-201ENST00000513405 SPANXA1Q9NS26 97 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms