RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 IGLV4-60A0A075B6I1 120 aa8.51□□□□□ -1.05
PDPN-210ENST00000513143 S100A6P06703 90 aa8.51□□□□□ -1.05
PDPN-210ENST00000513143 ERASQ7Z444 233 aa8.51□□□□□ -1.05
PDPN-210ENST00000513143 Q8N976 141 aa8.51□□□□□ -1.05
PDPN-210ENST00000513143 FAM104AQ969W3 186 aa8.51□□□□□ -1.05
PDPN-210ENST00000513143 TMEM101Q96IK0 257 aa8.51□□□□□ -1.05
PDPN-210ENST00000513143 IGHV3-30P01768 117 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 IGHV3-33P01772 117 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 NPSP0C0P6 89 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 IGHV3-30-3P0DP02 117 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 IGHV3-30-5P0DP03 117 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 MRPS36P82909 103 aaKnown RBP8.5□□□□□ -1.05
PDPN-210ENST00000513143 DGAT2L7PQ6IED9 249 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 OR5A1Q8NGJ0 315 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 SCGB3A1Q96QR1 104 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 TIMM17AQ99595 171 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
PDPN-210ENST00000513143 K7EP13 123 aa8.49□□□□□ -1.05
PDPN-210ENST00000513143 LY6G6CO95867 125 aa8.49□□□□□ -1.05
PDPN-210ENST00000513143 TMEM141Q96I45 108 aa8.49□□□□□ -1.05
PDPN-210ENST00000513143 TMA7Q9Y2S6 64 aaKnown RBP8.49□□□□□ -1.05
PDPN-210ENST00000513143 IGLV4-3A0A075B6K6 122 aa8.48□□□□□ -1.05
PDPN-210ENST00000513143 C5orf52A6NGY3 159 aa8.48□□□□□ -1.05
PDPN-210ENST00000513143 ATP5LO75964 103 aa8.48□□□□□ -1.05
PDPN-210ENST00000513143 LEPROTL1O95214 131 aa8.48□□□□□ -1.05
PDPN-210ENST00000513143 ANGP03950 147 aaKnown RBP8.48□□□□□ -1.05
PDPN-210ENST00000513143 SNRPEP62304 92 aaKnown RBP8.48□□□□□ -1.05
PDPN-210ENST00000513143 Q6ZUT4 128 aa8.48□□□□□ -1.05
PDPN-210ENST00000513143 HIST3H2BBQ8N257 126 aa8.48□□□□□ -1.05
PDPN-210ENST00000513143 ZNF664Q8N3J9 261 aa8.48□□□□□ -1.05
PDPN-210ENST00000513143 PACRGQ96M98 296 aaPredicted RBP8.48□□□□□ -1.05
PDPN-210ENST00000513143 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
PDPN-210ENST00000513143 ALMS1Q8TCU4 4167 aa8.48□□□□□ -1.05
PDPN-210ENST00000513143 TRAV9-2A0A087WT02 112 aa8.47□□□□□ -1.05
PDPN-210ENST00000513143 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.47□□□□□ -1.05
PDPN-210ENST00000513143 C10orf126Q8N4M7 172 aa8.47□□□□□ -1.05
PDPN-210ENST00000513143 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
PDPN-210ENST00000513143 IBA57-AS1B1ANH7 110 aa8.46□□□□□ -1.06
PDPN-210ENST00000513143 FABP4P15090 132 aa8.46□□□□□ -1.06
PDPN-210ENST00000513143 PAPPA-AS1Q5QFB9 102 aa8.46□□□□□ -1.06
PDPN-210ENST00000513143 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.06
PDPN-210ENST00000513143 LINC00269Q8N2A0 174 aa8.46□□□□□ -1.06
PDPN-210ENST00000513143 IFI27L1Q96BM0 104 aa8.46□□□□□ -1.06
PDPN-210ENST00000513143 AMELXQ99217 191 aa8.46□□□□□ -1.06
PDPN-210ENST00000513143 PRR34Q9NV39 138 aa8.46□□□□□ -1.06
PDPN-210ENST00000513143 HSPB8Q9UJY1 196 aa8.46□□□□□ -1.06
PDPN-210ENST00000513143 NBDYA0A0U1RRE5 68 aa8.45□□□□□ -1.06
PDPN-210ENST00000513143 RNASE13Q5GAN3 156 aaKnown RBP8.45□□□□□ -1.06
PDPN-210ENST00000513143 TTC32Q5I0X7 151 aa8.45□□□□□ -1.06
PDPN-210ENST00000513143 Q6ZN92 141 aa8.45□□□□□ -1.06
PDPN-210ENST00000513143 KRTAP1-5Q9BYS1 174 aa8.45□□□□□ -1.06
PDPN-210ENST00000513143 VCX2Q9H322 139 aa8.45□□□□□ -1.06
PDPN-210ENST00000513143 S100A2P29034 98 aa8.44□□□□□ -1.06
PDPN-210ENST00000513143 REG3AQ06141 175 aa8.44□□□□□ -1.06
PDPN-210ENST00000513143 ENHOQ6UWT2 76 aa8.44□□□□□ -1.06
PDPN-210ENST00000513143 TEX43Q6ZNM6 134 aa8.44□□□□□ -1.06
PDPN-210ENST00000513143 BAALCQ8WXS3 180 aa8.44□□□□□ -1.06
PDPN-210ENST00000513143 UBE2WQ96B02 151 aa8.44□□□□□ -1.06
PDPN-210ENST00000513143 LCE6AA0A183 80 aa8.43□□□□□ -1.06
PDPN-210ENST00000513143 IFITM10A6NMD0 228 aa8.43□□□□□ -1.06
PDPN-210ENST00000513143 ZC2HC1BQ5TFG8 222 aa8.43□□□□□ -1.06
PDPN-210ENST00000513143 CLPSL2Q6UWE3 100 aa8.43□□□□□ -1.06
PDPN-210ENST00000513143 HIST1H2BLQ99880 126 aa8.43□□□□□ -1.06
PDPN-210ENST00000513143 SACSQ9NZJ4 4579 aa8.42□□□□□ -1.06
PDPN-210ENST00000513143 CRPP02741 224 aa8.42□□□□□ -1.06
PDPN-210ENST00000513143 PRSS1P07477 247 aa8.42□□□□□ -1.06
PDPN-210ENST00000513143 PMVKQ15126 192 aa8.42□□□□□ -1.06
PDPN-210ENST00000513143 Q6ZR54 194 aa8.42□□□□□ -1.06
PDPN-210ENST00000513143 C2orf88Q9BSF0 95 aa8.42□□□□□ -1.06
PDPN-210ENST00000513143 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
PDPN-210ENST00000513143 DNAH6Q9C0G6 4158 aa8.41□□□□□ -1.06
PDPN-210ENST00000513143 TRAV8-3A0A0A6YYJ7 113 aa8.41□□□□□ -1.06
PDPN-210ENST00000513143 TRAV12-1A0A0B4J245 112 aa8.41□□□□□ -1.06
PDPN-210ENST00000513143 IGKV3OR2-268A0A0C4DH90 116 aa8.41□□□□□ -1.06
PDPN-210ENST00000513143 LINC00959A0A1B0GUT2 108 aa8.41□□□□□ -1.06
PDPN-210ENST00000513143 CCL25O15444 150 aa8.41□□□□□ -1.06
PDPN-210ENST00000513143 MIAQ16674 131 aa8.41□□□□□ -1.06
PDPN-210ENST00000513143 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
PDPN-210ENST00000513143 KMT2AQ03164 3969 aa8.4□□□□□ -1.06
PDPN-210ENST00000513143 TRAV13-1A0A0B4J241 112 aa8.4□□□□□ -1.06
PDPN-210ENST00000513143 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
PDPN-210ENST00000513143 PRSS29PA6NIE9 313 aa8.4□□□□□ -1.06
PDPN-210ENST00000513143 M0R2N4 97 aa8.4□□□□□ -1.06
PDPN-210ENST00000513143 UBE2D1P51668 147 aa8.4□□□□□ -1.06
PDPN-210ENST00000513143 KRTAP4-8Q9BYQ9 185 aa8.4□□□□□ -1.06
PDPN-210ENST00000513143 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
PDPN-210ENST00000513143 C3orf79P0CE67 100 aa8.39□□□□□ -1.07
PDPN-210ENST00000513143 SS18Q15532 418 aa8.39□□□□□ -1.07
PDPN-210ENST00000513143 FAM19A3Q7Z5A8 133 aa8.39□□□□□ -1.07
PDPN-210ENST00000513143 SPATA12Q7Z6I5 190 aa8.39□□□□□ -1.07
PDPN-210ENST00000513143 Q9HAA7 133 aa8.39□□□□□ -1.07
PDPN-210ENST00000513143 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
PDPN-210ENST00000513143 CHCHD10Q8WYQ3 142 aaPredicted RBP8.38□□□□□ -1.07
PDPN-210ENST00000513143 IGLV10-54A0A075B6I4 117 aa8.37□□□□□ -1.07
PDPN-210ENST00000513143 H0Y8G0 127 aa8.37□□□□□ -1.07
PDPN-210ENST00000513143 KRTDAPP60985 99 aa8.37□□□□□ -1.07
PDPN-210ENST00000513143 ODF1Q14990 250 aa8.37□□□□□ -1.07
PDPN-210ENST00000513143 KRTAP26-1Q6PEX3 210 aa8.37□□□□□ -1.07
PDPN-210ENST00000513143 PET117Q6UWS5 81 aa8.37□□□□□ -1.07
PDPN-210ENST00000513143 RMI2Q96E14 147 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms