RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 HIST1H1DP16402 221 aaKnown RBP-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 SPRR1BP22528 89 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 B2MP61769 119 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 C12orf73Q69YU5 71 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 MYOZ3Q8TDC0 251 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 USMG5Q96IX5 58 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 PPP3R2Q96LZ3 170 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 SDF2Q99470 211 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 DYNLRB1Q9NP97 96 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 UQCR10Q9UDW1 63 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 SIPA1L3O60292 1781 aaPredicted RBP-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 KDM3BQ7LBC6 1761 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 ANKRD30AQ9BXX3 1397 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 SHANK2Q9UPX8 1470 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 PDZD2O15018 2839 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 USP9YO00507 2555 aaPredicted RBP-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 KNL1Q8NG31 2342 aa-0.1□□□□□ -2.43
NPHP3-210ENST00000512094 MYH6P13533 1939 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 FHAD1B1AJZ9 1412 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 NAIPQ13075 1403 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 MUC22E2RYF6 1773 aaPredicted RBP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 MAP1AP78559 2803 aaPredicted RBP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 ARHGEF12Q9NZN5 1544 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 PAPPAQ13219 1627 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 TRBV7-4A0A0J9YYF1 115 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 IGLC7A0M8Q6 106 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 CPSF4LA6NMK7 179 aaKnown RBP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 MIF4GDA9UHW6 222 aaKnown RBP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 CHKB-CPT1BH3BT56 60 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 HMGN4O00479 90 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 SSSCA1O60232 199 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 SFT2D2O95562 160 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 TSPAN19P0C672 248 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 NBEAP1P0C6P0 100 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 SPRR2BP35325 72 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 ARPC4P59998 168 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 RPS25P62851 125 aaKnown RBP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 DR1Q01658 176 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 ALX1Q15699 326 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 WHAMMP3Q1A5X7 153 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 KLK9Q2XQG4 91 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 SMIM21Q3B7S5 101 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 Q56UQ5 140 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 MRPL54Q6P161 138 aaKnown RBP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 Q8N8P6 123 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 ANP32BQ92688 251 aaKnown RBP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 MGST2Q99735 147 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 SNRNP25Q9BV90 132 aaKnown RBP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 TMEM191AQ9H0A3 160 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 APLNQ9ULZ1 77 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 PRDM2Q13029 1718 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 ARAP2Q8WZ64 1704 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 FASNP49327 2511 aaKnown RBP-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 SBF2Q86WG5 1849 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 GAPVD1Q14C86 1478 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 IFT140Q96RY7 1462 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 COL6A3P12111 3177 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 NBASA2RRP1 2371 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 MXRA5Q9NR99 2828 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 LAMB1P07942 1786 aa-0.11□□□□□ -2.43
NPHP3-210ENST00000512094 DOCK2Q92608 1830 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 SPTBN4Q9H254 2564 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 TGP01266 2768 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 TRBV7-3A0A075B6L6 115 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 SPAARA0A1B0GVQ0 90 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 A0A1B0GWA3 101 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 F6UZH7 168 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 H0YGG7 62 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 I3L2K1 104 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 I3L3M4 83 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 PITX3O75364 302 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 APOC2P02655 101 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 TRAPPC2P0DI81 140 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 TRAPPC2BP0DI82 140 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 SNCAP37840 140 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 GNG11P61952 73 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 SEC11AP67812 179 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 CATR1Q13166 79 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 DEFB135Q30KP9 77 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 KRTAP19-8Q3LI54 63 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 C9orf153Q5TBE3 101 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 Q6AWC8 147 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 HEPN1Q6WQI6 88 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 TSLPQ969D9 159 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 ARL11Q969Q4 196 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 TSC22D3Q99576 134 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 PRO1933Q9H354 126 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 RERGLQ9H628 205 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 NAA60Q9H7X0 242 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 NXT2Q9NPJ8 142 aaKnown RBP-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 MANBALQ9NQG1 85 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 NDUFA4L2Q9NRX3 87 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 PAIP2BQ9ULR5 123 aaKnown RBP-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 SERP1Q9Y6X1 66 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 ARL2-SNX15V9GYD0 113 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 KTN1Q86UP2 1357 aaKnown RBP-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 IQSEC2Q5JU85 1478 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 CCDC141Q6ZP82 1450 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 PXDNQ92626 1479 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms