RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TP53AIP1Q9HCN2 124 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 CDC42SE2Q9NRR3 84 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 PRO1854Q9UHT4 67 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 FAT4Q6V0I7 4981 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 LAMB1P07942 1786 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 TTC28Q96AY4 2481 aa0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 PXDNQ92626 1479 aa0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 TNS1Q9HBL0 1735 aaKnown RBP0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 CACNA1HO95180 2353 aa0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 FXYD6-FXYD2A0A087WZ82 144 aa0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 Q0VG73 95 aa0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 FDCSPQ8NFU4 85 aa0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 LINC00472Q9H8W2 130 aa0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 A2ML1A8K2U0 1454 aa0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 ARAP2Q8WZ64 1704 aa0.16□□□□□ -2.38
TRAPPC11-207ENST00000511409 PARP14Q460N5 1801 aa0.15□□□□□ -2.38
TRAPPC11-207ENST00000511409 MAST4O15021 2626 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 TRBV6-1A0A0K0K1D8 114 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 TMEM218A2RU14 115 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 CRYM-AS1A6NIL9 109 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 C10orf142B7Z368 130 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 TMEM262E9PQX1 116 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 SEC11AP67812 179 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 WFDC2Q14508 124 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 CGREF1Q99674 301 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 TCEAL7Q9BRU2 100 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 VAMP8Q9BV40 100 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 AP4S1Q9Y587 144 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 JMJD1CQ15652 2540 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 UNC13BO14795 1591 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 ERCC6L2Q5T890 1561 aa0.15□□□□□ -2.39
TRAPPC11-207ENST00000511409 PI4KAP42356 2102 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 C10orf71Q711Q0 1435 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 PLXNA1Q9UIW2 1896 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 GNGT2O14610 69 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 DEFB109BQ30KR1 87 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 FAM223AQ8IWN6 122 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 PRO1933Q9H354 126 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 SPEF2Q9C093 1822 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 ARFGEF1Q9Y6D6 1849 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 POLA1P09884 1462 aaPredicted RBP0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 WDR7Q9Y4E6 1490 aa0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 MYH9P35579 1960 aaKnown RBP0.14□□□□□ -2.39
TRAPPC11-207ENST00000511409 SCAPERQ9BY12 1400 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 hADV29S1A0JD25 119 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 ATP6V1G2-DDX39BF2Z307 99 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 LINC00032P0C843 101 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 SAA2P0DJI9 122 aaPredicted RBP0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 SPRR1AP35321 89 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 Q5VSD8 79 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 C10orf113Q5VZT2 155 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 SPRR4Q96PI1 79 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 MYOM2P54296 1465 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 CACNA1CQ13936 2221 aa0.13□□□□□ -2.39
TRAPPC11-207ENST00000511409 IGF2RP11717 2491 aa0.12□□□□□ -2.39
TRAPPC11-207ENST00000511409 TRAV30A0A087WSZ9 112 aa0.12□□□□□ -2.39
TRAPPC11-207ENST00000511409 NDUFC1O43677 76 aa0.12□□□□□ -2.39
TRAPPC11-207ENST00000511409 S100A10P60903 97 aa0.12□□□□□ -2.39
TRAPPC11-207ENST00000511409 UBE2D3P61077 147 aa0.12□□□□□ -2.39
TRAPPC11-207ENST00000511409 UBE2D2P62837 147 aa0.12□□□□□ -2.39
TRAPPC11-207ENST00000511409 C14orf144Q96I85 54 aa0.12□□□□□ -2.39
TRAPPC11-207ENST00000511409 LINC00846Q9NV44 126 aa0.12□□□□□ -2.39
TRAPPC11-207ENST00000511409 NWD2Q9ULI1 1742 aa0.12□□□□□ -2.39
TRAPPC11-207ENST00000511409 ABCA12Q86UK0 2595 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 MYH7P12883 1935 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 BCL9LQ86UU0 1499 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 ZFYVE26Q68DK2 2539 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 IFT172Q9UG01 1749 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 TRBV7-4A0A0J9YYF1 115 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 C7orf77A4D0Y5 90 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 FAM223BA6NKX1 122 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 COX6B1P14854 86 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 RBP2P50120 134 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 PMCHL1Q16048 86 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 ACBD7Q8N6N7 88 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 CACFD1Q9UGQ2 172 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 MAPKBP1O60336 1514 aa0.11□□□□□ -2.39
TRAPPC11-207ENST00000511409 PZPP20742 1482 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 ASXL3Q9C0F0 2248 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 I3L2K1 104 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 SPINK4O60575 86 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 COL5A1-AS1Q5SY13 56 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 USMG5Q96IX5 58 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 LINC01600Q96MT4 127 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 DPY30Q9C005 99 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 FOCADQ5VW36 1801 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 LRRC37A2A6NM11 1700 aa0.1□□□□□ -2.39
TRAPPC11-207ENST00000511409 PATJQ8NI35 1801 aa0.09□□□□□ -2.39
TRAPPC11-207ENST00000511409 TRBV25-1A0A075B6N4 114 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 A0A0G2JND7 137 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 H3BQF6 201 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 SYS1-DBNDD2H3BUS1 97 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 COX8AP10176 69 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 SPRR1BP22528 89 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 TRGV9Q99603 122 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 PMCHL2Q9BQD1 86 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 DMBT1Q9UGM3 2413 aaPredicted RBP0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 DOCK1Q14185 1865 aa0.09□□□□□ -2.4
TRAPPC11-207ENST00000511409 LRP6O75581 1613 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms