RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 TRAV26-2A0A0B4J265 109 aa5.6□□□□□ -1.51
PDPN-209ENST00000510906 GATCO43716 136 aaKnown RBP5.6□□□□□ -1.51
PDPN-209ENST00000510906 HLA-DQA1P01909 254 aa5.6□□□□□ -1.51
PDPN-209ENST00000510906 FOXA3P55318 350 aaPredicted RBP5.6□□□□□ -1.51
PDPN-209ENST00000510906 MIAQ16674 131 aa5.6□□□□□ -1.51
PDPN-209ENST00000510906 LINC00269Q8N2A0 174 aa5.6□□□□□ -1.51
PDPN-209ENST00000510906 GATD1Q8NB37 220 aa5.6□□□□□ -1.51
PDPN-209ENST00000510906 SMDT1Q9H4I9 107 aa5.6□□□□□ -1.51
PDPN-209ENST00000510906 NIT2Q9NQR4 276 aa5.6□□□□□ -1.51
PDPN-209ENST00000510906 PRR34Q9NV39 138 aa5.6□□□□□ -1.51
PDPN-209ENST00000510906 TMEM218A2RU14 115 aa5.59□□□□□ -1.51
PDPN-209ENST00000510906 UBE2V1Q13404 147 aa5.59□□□□□ -1.51
PDPN-209ENST00000510906 KRTAP26-1Q6PEX3 210 aa5.59□□□□□ -1.51
PDPN-209ENST00000510906 FAM231DQ6ZW35 169 aa5.59□□□□□ -1.51
PDPN-209ENST00000510906 SVBPQ8N300 66 aa5.59□□□□□ -1.51
PDPN-209ENST00000510906 C20orf203Q8NBC4 194 aa5.59□□□□□ -1.51
PDPN-209ENST00000510906 TMEM243Q9BU79 118 aa5.59□□□□□ -1.51
PDPN-209ENST00000510906 SEC11CQ9BY50 192 aa5.59□□□□□ -1.51
PDPN-209ENST00000510906 GFRA4Q9GZZ7 299 aa5.59□□□□□ -1.51
PDPN-209ENST00000510906 CARHSP1Q9Y2V2 147 aaKnown RBP5.59□□□□□ -1.51
PDPN-209ENST00000510906 FLG2Q5D862 2391 aaPredicted RBP5.58□□□□□ -1.52
PDPN-209ENST00000510906 IGLV4-60A0A075B6I1 120 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 APOC3P02656 99 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 REG3AQ06141 175 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 PEA15Q15121 130 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 C14orf177Q52M58 125 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 C10orf91Q5T1B1 145 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 SCXQ7RTU7 201 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 RPL39LQ96EH5 51 aaKnown RBP5.58□□□□□ -1.52
PDPN-209ENST00000510906 PGLYRP4Q96LB8 373 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 SMIM7Q9BQ49 75 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
PDPN-209ENST00000510906 EIF5A2Q9GZV4 153 aaKnown RBP5.58□□□□□ -1.52
PDPN-209ENST00000510906 IGLV10-54A0A075B6I4 117 aa5.57□□□□□ -1.52
PDPN-209ENST00000510906 A8MWL6 223 aa5.57□□□□□ -1.52
PDPN-209ENST00000510906 F8W036 122 aa5.57□□□□□ -1.52
PDPN-209ENST00000510906 SNAPINO95295 136 aa5.57□□□□□ -1.52
PDPN-209ENST00000510906 PRSS1P07477 247 aa5.57□□□□□ -1.52
PDPN-209ENST00000510906 SRP19P09132 144 aaKnown RBP5.57□□□□□ -1.52
PDPN-209ENST00000510906 SNRPEP62304 92 aaKnown RBP5.57□□□□□ -1.52
PDPN-209ENST00000510906 COTL1Q14019 142 aa5.57□□□□□ -1.52
PDPN-209ENST00000510906 LINC01551Q86U37 167 aa5.57□□□□□ -1.52
PDPN-209ENST00000510906 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
PDPN-209ENST00000510906 A0A1B0GUV1 79 aa5.56□□□□□ -1.52
PDPN-209ENST00000510906 ZNF727A8MUV8 499 aa5.56□□□□□ -1.52
PDPN-209ENST00000510906 GAS8-AS1O95177 125 aa5.56□□□□□ -1.52
PDPN-209ENST00000510906 SMIM15Q7Z3B0 74 aa5.56□□□□□ -1.52
PDPN-209ENST00000510906 CHAC1Q9BUX1 264 aa5.56□□□□□ -1.52
PDPN-209ENST00000510906 SDHAF1A6NFY7 115 aa5.55□□□□□ -1.52
PDPN-209ENST00000510906 UBE2L6O14933 153 aa5.55□□□□□ -1.52
PDPN-209ENST00000510906 NDUFS6O75380 124 aaKnown RBP5.55□□□□□ -1.52
PDPN-209ENST00000510906 CIRBP-AS1Q8TBR5 109 aa5.55□□□□□ -1.52
PDPN-209ENST00000510906 TSKUQ8WUA8 353 aa5.55□□□□□ -1.52
PDPN-209ENST00000510906 OSTCQ9NRP0 149 aa5.55□□□□□ -1.52
PDPN-209ENST00000510906 IGLV5-37A0A075B6J1 123 aa5.54□□□□□ -1.52
PDPN-209ENST00000510906 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
PDPN-209ENST00000510906 TRAV8-4A0A0B4J246 113 aa5.54□□□□□ -1.52
PDPN-209ENST00000510906 IGKV2-29A2NJV5 120 aaPredicted RBP5.54□□□□□ -1.52
PDPN-209ENST00000510906 HIGD1CA8MV81 97 aa5.54□□□□□ -1.52
PDPN-209ENST00000510906 C9JQL5 133 aa5.54□□□□□ -1.52
PDPN-209ENST00000510906 SCO1O75880 301 aa5.54□□□□□ -1.52
PDPN-209ENST00000510906 BORCS7Q96B45 105 aa5.54□□□□□ -1.52
PDPN-209ENST00000510906 V9GYV3 84 aa5.54□□□□□ -1.52
PDPN-209ENST00000510906 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
PDPN-209ENST00000510906 TRBV6-5A0A0K0K1A5 114 aa5.53□□□□□ -1.52
PDPN-209ENST00000510906 A0A1B0GUT8 65 aa5.53□□□□□ -1.52
PDPN-209ENST00000510906 NCR2O95944 276 aa5.53□□□□□ -1.52
PDPN-209ENST00000510906 APCSP02743 223 aa5.53□□□□□ -1.52
PDPN-209ENST00000510906 PNRC1Q12796 327 aaPredicted RBP5.53□□□□□ -1.52
PDPN-209ENST00000510906 C9orf163Q8N9P6 203 aa5.53□□□□□ -1.52
PDPN-209ENST00000510906 ISOC2Q96AB3 205 aa5.53□□□□□ -1.52
PDPN-209ENST00000510906 RNF185Q96GF1 192 aa5.53□□□□□ -1.52
PDPN-209ENST00000510906 TMEM191AQ9H0A3 160 aa5.53□□□□□ -1.52
PDPN-209ENST00000510906 FAM231BA6NCW3 169 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 PANO1I0J062 215 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 I3L3M4 83 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 TSHBP01222 138 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 PRSS2P07478 247 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 FGF6P10767 208 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 ADCYAP1P18509 176 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 RAB4AP20338 218 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 PMCHP20382 165 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 RPS10P46783 165 aaKnown RBP5.52□□□□□ -1.53
PDPN-209ENST00000510906 RPL23P62829 140 aaKnown RBP5.52□□□□□ -1.53
PDPN-209ENST00000510906 ADIRFQ15847 76 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 TMEM241Q24JQ0 296 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 AMMECR1LQ6DCA0 310 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 RNASEKQ6P5S7 137 aaKnown RBP5.52□□□□□ -1.53
PDPN-209ENST00000510906 AMN1Q8IY45 258 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 NUP35Q8NFH5 326 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 TMEM242Q9NWH2 141 aa5.52□□□□□ -1.53
PDPN-209ENST00000510906 SMKR1H3BMG3 65 aa5.51□□□□□ -1.53
PDPN-209ENST00000510906 H7C423 109 aa5.51□□□□□ -1.53
PDPN-209ENST00000510906 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
PDPN-209ENST00000510906 RHEBQ15382 184 aa5.51□□□□□ -1.53
PDPN-209ENST00000510906 FAM74A3Q4VXF1 159 aa5.51□□□□□ -1.53
PDPN-209ENST00000510906 SDIM1Q6ZPB5 146 aa5.51□□□□□ -1.53
PDPN-209ENST00000510906 C15orf56Q8N910 161 aa5.51□□□□□ -1.53
PDPN-209ENST00000510906 ST20Q9HBF5 79 aa5.51□□□□□ -1.53
PDPN-209ENST00000510906 NAT8Q9UHE5 227 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms