RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 DEFB113Q30KQ7 82 aa3□□□□□ -1.93
SPARCL1-206ENST00000509407 ST20-AS1Q8NBB2 130 aa3□□□□□ -1.93
SPARCL1-206ENST00000509407 TYMSOSQ8TAI1 123 aa3□□□□□ -1.93
SPARCL1-206ENST00000509407 KLF14Q8TD94 323 aaPredicted RBP3□□□□□ -1.93
SPARCL1-206ENST00000509407 CDC42SE2Q9NRR3 84 aa3□□□□□ -1.93
SPARCL1-206ENST00000509407 PSENENQ9NZ42 101 aa3□□□□□ -1.93
SPARCL1-206ENST00000509407 PLXNB2O15031 1838 aa3□□□□□ -1.93
SPARCL1-206ENST00000509407 KIAA1549LQ6ZVL6 1849 aa3□□□□□ -1.93
SPARCL1-206ENST00000509407 KIAA0100Q14667 2235 aaKnown RBP3□□□□□ -1.93
SPARCL1-206ENST00000509407 TRBV6-8A0A0A6YYG3 113 aa2.99□□□□□ -1.93
SPARCL1-206ENST00000509407 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
SPARCL1-206ENST00000509407 TFF1P04155 84 aa2.99□□□□□ -1.93
SPARCL1-206ENST00000509407 MDKP21741 143 aaPredicted RBP2.99□□□□□ -1.93
SPARCL1-206ENST00000509407 KRTAP10-12P60413 245 aa2.99□□□□□ -1.93
SPARCL1-206ENST00000509407 ERHP84090 104 aaKnown RBP2.99□□□□□ -1.93
SPARCL1-206ENST00000509407 ATXN8Q156A1 80 aa2.99□□□□□ -1.93
SPARCL1-206ENST00000509407 ZNF833PQ6ZTB9 187 aa2.99□□□□□ -1.93
SPARCL1-206ENST00000509407 LYPD6Q86Y78 171 aa2.99□□□□□ -1.93
SPARCL1-206ENST00000509407 TMSB15BA0A087X1C1 80 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 A0A0J9YX75 114 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 LOC101927531A0A1B0GV80 90 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 LEPROTL1O95214 131 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 SAA2P0DJI9 122 aaPredicted RBP2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 ELOF1P60002 83 aaKnown RBP2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 LINC00483Q53H64 154 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 CLECL1Q8IZS7 167 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 DEFB123Q8N688 67 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 UBALD1Q8TB05 177 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 MYO16Q9Y6X6 1858 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 GTF3C1Q12789 2109 aa2.98□□□□□ -1.93
SPARCL1-206ENST00000509407 MALRD1Q5VYJ5 2156 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 IGLV2-18A0A075B6J9 118 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 IGHV3OR16-8A0A075B7F1 116 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 A0A0J9YWU9 116 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 HIGD1CA8MV81 97 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 IGHV3-33P01772 117 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 CISD3P0C7P0 127 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 P0C880 135 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 CFC1P0CG37 223 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 UBE2D4Q9Y2X8 147 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 LAMA4Q16363 1823 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 ZNF236Q9UL36 1845 aa2.97□□□□□ -1.93
SPARCL1-206ENST00000509407 CABIN1Q9Y6J0 2220 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 A0A1W2PNM2 257 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 ARMS2P0C7Q2 107 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 KRTAP26-1Q6PEX3 210 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 DMAC1Q96GE9 116 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 LINC00167Q96N53 147 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 PROK2Q9HC23 129 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 NDUFA4L2Q9NRX3 87 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 Q9Y3F1 56 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 LENEPQ9Y5L5 61 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 LHFPL6Q9Y693 200 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 TSC2P49815 1807 aa2.96□□□□□ -1.94
SPARCL1-206ENST00000509407 D6R8Y8 96 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 HMGN4O00479 90 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 RTL8CO15255 209 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 PSCAO43653 123 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 SPINT3P49223 89 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 C1orf137Q5JT78 98 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 MUSTN1Q8IVN3 82 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 LYPD1Q8N2G4 141 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 NMES1Q9C002 83 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 KLK12Q9UKR0 248 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 CEP290O15078 2479 aa2.95□□□□□ -1.94
SPARCL1-206ENST00000509407 NUP214P35658 2090 aaPredicted RBP2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 A0A0G2JMZ2 1700 aa2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 COL11A1P12107 1806 aaPredicted RBP2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 PRH1P02810 166 aa2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 KIF26BQ2KJY2 2108 aa2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 CSAG1Q6PB30 78 aa2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 Q86TA4 180 aa2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 PPP1R1CQ8WVI7 109 aa2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 C4orf3Q8WVX3 66 aa2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 HIGD2AQ9BW72 106 aa2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 MRPL36Q9P0J6 103 aaKnown RBP2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 NINQ8N4C6 2090 aa2.94□□□□□ -1.94
SPARCL1-206ENST00000509407 CPAMD8Q8IZJ3 1885 aa2.93□□□□□ -1.94
SPARCL1-206ENST00000509407 WISP3O95389 354 aaPredicted RBP2.93□□□□□ -1.94
SPARCL1-206ENST00000509407 KRTAP25-1Q3LHN0 102 aa2.93□□□□□ -1.94
SPARCL1-206ENST00000509407 AMELXQ99217 191 aa2.93□□□□□ -1.94
SPARCL1-206ENST00000509407 ORMDL1Q9P0S3 153 aa2.93□□□□□ -1.94
SPARCL1-206ENST00000509407 TNRC18O15417 2968 aaPredicted RBP2.93□□□□□ -1.94
SPARCL1-206ENST00000509407 TRIOBPQ9H2D6 2365 aa2.93□□□□□ -1.94
SPARCL1-206ENST00000509407 GBF1Q92538 1859 aa2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 CENPFP49454 3210 aa2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 IGLV4-69A0A075B6H9 119 aa2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 SSBP1Q04837 148 aaKnown RBP2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 SPAG11BQ08648 103 aa2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 SPAG11AQ6PDA7 123 aa2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 SMIM4Q8WVI0 70 aa2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 MYOFQ9NZM1 2061 aa2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 FREM3P0C091 2139 aa2.92□□□□□ -1.94
SPARCL1-206ENST00000509407 DOCK9Q9BZ29 2069 aa2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 DIDO1Q9BTC0 2240 aaKnown RBP2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 NUPR2A6NF83 97 aa2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 A8MU10 97 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms